RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 EPM2AB3EWF7 344 aa19.18■□□□□ 0.66
CCM2-219ENST00000544363 KMT2CQ8NEZ4 4911 aaKnown RBP19.17■□□□□ 0.66
CCM2-219ENST00000544363 PRYO14603 147 aa19.17■□□□□ 0.66
CCM2-219ENST00000544363 PKD1P98161 4303 aa19.16■□□□□ 0.66
CCM2-219ENST00000544363 A0A087WYN8 130 aa19.16■□□□□ 0.66
CCM2-219ENST00000544363 PHF5AQ7RTV0 110 aaKnown RBP19.16■□□□□ 0.66
CCM2-219ENST00000544363 DNAH5Q8TE73 4624 aa19.16■□□□□ 0.66
CCM2-219ENST00000544363 TRBV7-6A0A0J9YX20 115 aa19.15■□□□□ 0.66
CCM2-219ENST00000544363 TRACP01848 142 aa19.11■□□□□ 0.65
CCM2-219ENST00000544363 COX7BP24311 80 aa19.11■□□□□ 0.65
CCM2-219ENST00000544363 PLAC8Q9NZF1 115 aa19.11■□□□□ 0.65
CCM2-219ENST00000544363 SPRR1AP35321 89 aa19.1■□□□□ 0.65
CCM2-219ENST00000544363 ELOF1P60002 83 aaKnown RBP19.1■□□□□ 0.65
CCM2-219ENST00000544363 LINC00575Q6W349 94 aa19.08■□□□□ 0.65
CCM2-219ENST00000544363 MTURNQ8N3F0 131 aa19.08■□□□□ 0.65
CCM2-219ENST00000544363 C9JAW5 83 aa19.07■□□□□ 0.64
CCM2-219ENST00000544363 UBE2BP63146 152 aa19.07■□□□□ 0.64
CCM2-219ENST00000544363 PRO0461Q9UI25 63 aa19.07■□□□□ 0.64
CCM2-219ENST00000544363 A0A1B0GX51 115 aa19.07■□□□□ 0.64
CCM2-219ENST00000544363 KRTAP10-1P60331 282 aa19.07■□□□□ 0.64
CCM2-219ENST00000544363 REG3GQ6UW15 175 aa19.07■□□□□ 0.64
CCM2-219ENST00000544363 F8W1H4 67 aa19.06■□□□□ 0.64
CCM2-219ENST00000544363 KRTAP4-16G5E9R7 235 aaPredicted RBP19.06■□□□□ 0.64
CCM2-219ENST00000544363 A0A1B0GVY2 172 aa19.03■□□□□ 0.64
CCM2-219ENST00000544363 FAM30AQ9NZY2 134 aa19.03■□□□□ 0.64
CCM2-219ENST00000544363 KRTAP11-1Q8IUC1 163 aa19.03■□□□□ 0.64
CCM2-219ENST00000544363 LINC00528Q8N1L1 170 aa19.03■□□□□ 0.64
CCM2-219ENST00000544363 ETDCA0A1B0GVM5 59 aa19.02■□□□□ 0.64
CCM2-219ENST00000544363 SNCGO76070 127 aa19.02■□□□□ 0.64
CCM2-219ENST00000544363 DNAH8Q96JB1 4490 aa19.02■□□□□ 0.63
CCM2-219ENST00000544363 DNAL4O96015 105 aa19.01■□□□□ 0.63
CCM2-219ENST00000544363 Q6ZSA8 131 aa19.01■□□□□ 0.63
CCM2-219ENST00000544363 hADV29S1A0JD25 119 aa19■□□□□ 0.63
CCM2-219ENST00000544363 SLC25A20O43772 301 aa19■□□□□ 0.63
CCM2-219ENST00000544363 B5MCH6 92 aa19■□□□□ 0.63
CCM2-219ENST00000544363 SMCPP49901 116 aaPredicted RBP18.99■□□□□ 0.63
CCM2-219ENST00000544363 Q6ZRX8 168 aa18.97■□□□□ 0.63
CCM2-219ENST00000544363 INAFM2P0DMQ5 153 aa18.94■□□□□ 0.62
CCM2-219ENST00000544363 H3BT86 120 aa18.93■□□□□ 0.62
CCM2-219ENST00000544363 ANKRD29Q8N6D5 301 aa18.93■□□□□ 0.62
CCM2-219ENST00000544363 CIRBP-AS1Q8TBR5 109 aa18.93■□□□□ 0.62
CCM2-219ENST00000544363 LINC01600Q96MT4 127 aa18.92■□□□□ 0.62
CCM2-219ENST00000544363 BAALC-AS2P0C853 105 aa18.9■□□□□ 0.62
CCM2-219ENST00000544363 SCXQ7RTU7 201 aa18.9■□□□□ 0.62
CCM2-219ENST00000544363 FAM19A1Q7Z5A9 133 aa18.9■□□□□ 0.62
CCM2-219ENST00000544363 DHRS4-AS1Q9P1J3 65 aa18.89■□□□□ 0.62
CCM2-219ENST00000544363 Q9BRP9 147 aa18.89■□□□□ 0.61
CCM2-219ENST00000544363 ORMDL1Q9P0S3 153 aa18.89■□□□□ 0.61
CCM2-219ENST00000544363 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP18.85■□□□□ 0.61
CCM2-219ENST00000544363 Q6ZQY7 126 aa18.85■□□□□ 0.61
CCM2-219ENST00000544363 PKHD1P08F94 4074 aa18.85■□□□□ 0.61
CCM2-219ENST00000544363 BCE1O60756 84 aa18.85■□□□□ 0.61
CCM2-219ENST00000544363 PRLHP81277 87 aa18.83■□□□□ 0.61
CCM2-219ENST00000544363 ETDBQ3ZM63 59 aa18.82■□□□□ 0.6
CCM2-219ENST00000544363 H0Y9J4 135 aa18.82■□□□□ 0.6
CCM2-219ENST00000544363 PSORS1C2Q9UIG4 136 aa18.82■□□□□ 0.6
CCM2-219ENST00000544363 SMCR5Q8TEV8 140 aa18.8■□□□□ 0.6
CCM2-219ENST00000544363 HAMPP81172 84 aa18.79■□□□□ 0.6
CCM2-219ENST00000544363 RYR3Q15413 4870 aa18.78■□□□□ 0.6
CCM2-219ENST00000544363 UBE2AP49459 152 aa18.78■□□□□ 0.6
CCM2-219ENST00000544363 OCIAD2Q56VL3 154 aa18.78■□□□□ 0.6
CCM2-219ENST00000544363 TEN1Q86WV5 123 aa18.78■□□□□ 0.6
CCM2-219ENST00000544363 TMEM256-PLSCR3K7ERE1 68 aa18.77■□□□□ 0.6
CCM2-219ENST00000544363 LRP1BQ9NZR2 4599 aa18.76■□□□□ 0.59
CCM2-219ENST00000544363 H3BQ85 93 aa18.75■□□□□ 0.59
CCM2-219ENST00000544363 ERC2-IT1O76042 136 aa18.75■□□□□ 0.59
CCM2-219ENST00000544363 KRTAP13-1Q8IUC0 172 aa18.74■□□□□ 0.59
CCM2-219ENST00000544363 GHRHP01286 108 aa18.74■□□□□ 0.59
CCM2-219ENST00000544363 HIGD2AQ9BW72 106 aa18.74■□□□□ 0.59
CCM2-219ENST00000544363 C1orf137Q5JT78 98 aa18.73■□□□□ 0.59
CCM2-219ENST00000544363 DYNC1H1Q14204 4646 aaKnown RBP18.71■□□□□ 0.59
CCM2-219ENST00000544363 ST20-AS1Q8NBB2 130 aa18.68■□□□□ 0.58
CCM2-219ENST00000544363 TEX49A0A1B0GTD5 131 aa18.66■□□□□ 0.58
CCM2-219ENST00000544363 LINC01547P58512 204 aaPredicted RBP18.66■□□□□ 0.58
CCM2-219ENST00000544363 DEFB105AQ8NG35 78 aa18.65■□□□□ 0.58
CCM2-219ENST00000544363 IGLV5-48A0A075B6I7 105 aa18.63■□□□□ 0.57
CCM2-219ENST00000544363 Q8N377 158 aa18.63■□□□□ 0.57
CCM2-219ENST00000544363 PPDPFLQ8WWR9 84 aa18.63■□□□□ 0.57
CCM2-219ENST00000544363 XGP55808 180 aa18.62■□□□□ 0.57
CCM2-219ENST00000544363 ZNF861PO60384 105 aa18.6■□□□□ 0.57
CCM2-219ENST00000544363 IGLV7-43P04211 117 aa18.6■□□□□ 0.57
CCM2-219ENST00000544363 OBSCN-AS1Q96MR7 158 aa18.59■□□□□ 0.57
CCM2-219ENST00000544363 LAMTOR3Q9UHA4 124 aa18.59■□□□□ 0.57
CCM2-219ENST00000544363 JMJD7-PLA2G4BH0Y9G9 81 aa18.56■□□□□ 0.56
CCM2-219ENST00000544363 NDUFV3P56181 108 aaKnown RBP18.55■□□□□ 0.56
CCM2-219ENST00000544363 A0A1B0GV72 72 aa18.52■□□□□ 0.56
CCM2-219ENST00000544363 APOBP04114 4563 aaKnown RBP18.5■□□□□ 0.55
CCM2-219ENST00000544363 C14orf132Q9NPU4 83 aa18.48■□□□□ 0.55
CCM2-219ENST00000544363 SPRR1BP22528 89 aa18.47■□□□□ 0.55
CCM2-219ENST00000544363 RBM3P98179 157 aaKnown RBP18.47■□□□□ 0.55
CCM2-219ENST00000544363 GAGE2AQ6NT46 116 aa18.47■□□□□ 0.55
CCM2-219ENST00000544363 C3orf22Q8N5N4 141 aa18.47■□□□□ 0.55
CCM2-219ENST00000544363 J3QR89 54 aa18.46■□□□□ 0.55
CCM2-219ENST00000544363 K7ERU9 68 aa18.46■□□□□ 0.55
CCM2-219ENST00000544363 SMIM29Q86T20 159 aa18.45■□□□□ 0.54
CCM2-219ENST00000544363 SPRR4Q96PI1 79 aa18.44■□□□□ 0.54
CCM2-219ENST00000544363 ZNF706Q9Y5V0 76 aaPredicted RBP18.44■□□□□ 0.54
CCM2-219ENST00000544363 VPS13BQ7Z7G8 4022 aa18.42■□□□□ 0.54
CCM2-219ENST00000544363 SMR3BP02814 79 aaPredicted RBP18.41■□□□□ 0.54
CCM2-219ENST00000544363 SRRM2Q9UQ35 2752 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms