RNA–Protein interactions for RNA: ENST00000543405.1

CACNA2D4-216, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-216ENST00000543405 ERG28Q9UKR5 140 aa6.8□□□□□ -1.32
CACNA2D4-216ENST00000543405 SYS1-DBNDD2H3BUS1 97 aa6.79□□□□□ -1.32
CACNA2D4-216ENST00000543405 SCGB3A1Q96QR1 104 aa6.79□□□□□ -1.32
CACNA2D4-216ENST00000543405 CST9LQ9H4G1 147 aa6.79□□□□□ -1.32
CACNA2D4-216ENST00000543405 COX17Q14061 63 aa6.78□□□□□ -1.32
CACNA2D4-216ENST00000543405 MAP1LC3CQ9BXW4 147 aa6.78□□□□□ -1.32
CACNA2D4-216ENST00000543405 FLGP20930 4061 aaPredicted RBP6.77□□□□□ -1.33
CACNA2D4-216ENST00000543405 LINC01549A6NIU2 74 aa6.77□□□□□ -1.33
CACNA2D4-216ENST00000543405 SLC25A20O43772 301 aa6.77□□□□□ -1.33
CACNA2D4-216ENST00000543405 LINC01545Q5VT33 79 aa6.77□□□□□ -1.33
CACNA2D4-216ENST00000543405 C20orf202A1L168 122 aa6.76□□□□□ -1.33
CACNA2D4-216ENST00000543405 KRTAP4-16G5E9R7 235 aaPredicted RBP6.76□□□□□ -1.33
CACNA2D4-216ENST00000543405 H3BRM9 83 aa6.76□□□□□ -1.33
CACNA2D4-216ENST00000543405 SPRR1AP35321 89 aa6.76□□□□□ -1.33
CACNA2D4-216ENST00000543405 IFI27L1Q96BM0 104 aa6.76□□□□□ -1.33
CACNA2D4-216ENST00000543405 SSPOA2VEC9 5147 aa6.75□□□□□ -1.33
CACNA2D4-216ENST00000543405 PRYO14603 147 aa6.75□□□□□ -1.33
CACNA2D4-216ENST00000543405 MOBPQ13875 183 aa6.75□□□□□ -1.33
CACNA2D4-216ENST00000543405 PMVKQ15126 192 aa6.75□□□□□ -1.33
CACNA2D4-216ENST00000543405 SMCR5Q8TEV8 140 aa6.75□□□□□ -1.33
CACNA2D4-216ENST00000543405 IGLC3P0DOY3 106 aa6.74□□□□□ -1.33
CACNA2D4-216ENST00000543405 PCOTHQ58A44 107 aa6.74□□□□□ -1.33
CACNA2D4-216ENST00000543405 SSBP3-AS1Q7Z2R9 100 aa6.74□□□□□ -1.33
CACNA2D4-216ENST00000543405 VAMP8Q9BV40 100 aa6.74□□□□□ -1.33
CACNA2D4-216ENST00000543405 IGLV8-61A0A075B6I0 122 aa6.73□□□□□ -1.33
CACNA2D4-216ENST00000543405 TSTD3H0UI37 97 aa6.73□□□□□ -1.33
CACNA2D4-216ENST00000543405 ZNF22P17026 224 aaPredicted RBP6.73□□□□□ -1.33
CACNA2D4-216ENST00000543405 ZNF625Q96I27 306 aaPredicted RBP6.73□□□□□ -1.33
CACNA2D4-216ENST00000543405 USH2AO75445 5202 aa6.72□□□□□ -1.33
CACNA2D4-216ENST00000543405 TRAV12-1A0A0B4J245 112 aa6.72□□□□□ -1.33
CACNA2D4-216ENST00000543405 KCNQ1DNQ9H478 68 aa6.72□□□□□ -1.33
CACNA2D4-216ENST00000543405 IGLV9-49A0A0B4J1Y8 123 aa6.71□□□□□ -1.34
CACNA2D4-216ENST00000543405 PCP4L1A6NKN8 68 aa6.71□□□□□ -1.34
CACNA2D4-216ENST00000543405 M0R2T5 61 aa6.71□□□□□ -1.34
CACNA2D4-216ENST00000543405 GAGE2AQ6NT46 116 aa6.71□□□□□ -1.34
CACNA2D4-216ENST00000543405 SPATA45Q537H7 98 aa6.7□□□□□ -1.34
CACNA2D4-216ENST00000543405 PRO1933Q9H354 126 aa6.7□□□□□ -1.34
CACNA2D4-216ENST00000543405 PAM16Q9Y3D7 125 aa6.7□□□□□ -1.34
CACNA2D4-216ENST00000543405 ERC2-IT1O76042 136 aa6.69□□□□□ -1.34
CACNA2D4-216ENST00000543405 DDTP30046 118 aa6.69□□□□□ -1.34
CACNA2D4-216ENST00000543405 SFTA2Q6UW10 78 aa6.69□□□□□ -1.34
CACNA2D4-216ENST00000543405 ATOH7Q8N100 152 aa6.69□□□□□ -1.34
CACNA2D4-216ENST00000543405 ETDCA0A1B0GVM5 59 aa6.68□□□□□ -1.34
CACNA2D4-216ENST00000543405 H0Y8G0 127 aa6.68□□□□□ -1.34
CACNA2D4-216ENST00000543405 MIEN1Q9BRT3 115 aa6.68□□□□□ -1.34
CACNA2D4-216ENST00000543405 LINC00587B1AMM8 73 aa6.67□□□□□ -1.34
CACNA2D4-216ENST00000543405 HSBP1L1C9JCN9 74 aa6.67□□□□□ -1.34
CACNA2D4-216ENST00000543405 PMCHL2Q9BQD1 86 aa6.67□□□□□ -1.34
CACNA2D4-216ENST00000543405 NCR3O14931 201 aa6.66□□□□□ -1.34
CACNA2D4-216ENST00000543405 DPM2O94777 84 aa6.66□□□□□ -1.34
CACNA2D4-216ENST00000543405 IGKCP01834 107 aa6.66□□□□□ -1.34
CACNA2D4-216ENST00000543405 LINC00158P58513 81 aa6.66□□□□□ -1.34
CACNA2D4-216ENST00000543405 UQCR10Q9UDW1 63 aa6.66□□□□□ -1.34
CACNA2D4-216ENST00000543405 TRBV10-3A0A0K0K1G6 114 aa6.65□□□□□ -1.34
CACNA2D4-216ENST00000543405 PLNP26678 52 aa6.65□□□□□ -1.34
CACNA2D4-216ENST00000543405 Q9BRP9 147 aa6.65□□□□□ -1.34
CACNA2D4-216ENST00000543405 A0A0U1RRA0 63 aa6.64□□□□□ -1.35
CACNA2D4-216ENST00000543405 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
CACNA2D4-216ENST00000543405 C11orf86A6NJI1 115 aa6.64□□□□□ -1.35
CACNA2D4-216ENST00000543405 BOD1L2Q8IYS8 172 aa6.64□□□□□ -1.35
CACNA2D4-216ENST00000543405 KRTAP4-6Q9BYQ5 205 aa6.64□□□□□ -1.35
CACNA2D4-216ENST00000543405 CHTOPQ9Y3Y2 248 aaKnown RBP6.64□□□□□ -1.35
CACNA2D4-216ENST00000543405 FCGBPQ9Y6R7 5405 aaPredicted RBP6.64□□□□□ -1.35
CACNA2D4-216ENST00000543405 COX8AP10176 69 aa6.63□□□□□ -1.35
CACNA2D4-216ENST00000543405 C9orf92A6NGG3 77 aa6.62□□□□□ -1.35
CACNA2D4-216ENST00000543405 DLEU1O43261 78 aa6.62□□□□□ -1.35
CACNA2D4-216ENST00000543405 C14orf144Q96I85 54 aa6.62□□□□□ -1.35
CACNA2D4-216ENST00000543405 SMIM13P0DJ93 91 aa6.61□□□□□ -1.35
CACNA2D4-216ENST00000543405 C9orf153Q5TBE3 101 aa6.61□□□□□ -1.35
CACNA2D4-216ENST00000543405 SLC25A34Q6PIV7 304 aa6.61□□□□□ -1.35
CACNA2D4-216ENST00000543405 Q6ZRX8 168 aa6.61□□□□□ -1.35
CACNA2D4-216ENST00000543405 TMEM170BQ5T4T1 132 aa6.6□□□□□ -1.35
CACNA2D4-216ENST00000543405 COX6B2Q6YFQ2 88 aa6.6□□□□□ -1.35
CACNA2D4-216ENST00000543405 MIR7-3HGQ8N6C7 128 aa6.6□□□□□ -1.35
CACNA2D4-216ENST00000543405 E9PLD3 99 aa6.58□□□□□ -1.36
CACNA2D4-216ENST00000543405 LIMD2Q9BT23 127 aa6.58□□□□□ -1.36
CACNA2D4-216ENST00000543405 TMEM223A0PJW6 202 aa6.57□□□□□ -1.36
CACNA2D4-216ENST00000543405 IGLV6-57P01721 117 aa6.57□□□□□ -1.36
CACNA2D4-216ENST00000543405 C2orf91Q6ZV80 131 aa6.57□□□□□ -1.36
CACNA2D4-216ENST00000543405 M0R143 59 aa6.56□□□□□ -1.36
CACNA2D4-216ENST00000543405 NMUP48645 174 aa6.56□□□□□ -1.36
CACNA2D4-216ENST00000543405 HERVK_113P61574 105 aa6.56□□□□□ -1.36
CACNA2D4-216ENST00000543405 MEIG1Q5JSS6 88 aa6.56□□□□□ -1.36
CACNA2D4-216ENST00000543405 PCP2Q8IVA1 136 aa6.56□□□□□ -1.36
CACNA2D4-216ENST00000543405 SNHG12Q9BXW3 62 aa6.56□□□□□ -1.36
CACNA2D4-216ENST00000543405 HIGD1BQ9P298 99 aa6.56□□□□□ -1.36
CACNA2D4-216ENST00000543405 LOC107984156A0A0G2JMH3 177 aa6.55□□□□□ -1.36
CACNA2D4-216ENST00000543405 TRBV10-2A0A0K0K1G8 114 aa6.55□□□□□ -1.36
CACNA2D4-216ENST00000543405 RPL37P61927 97 aaKnown RBP6.55□□□□□ -1.36
CACNA2D4-216ENST00000543405 ARL17AQ8IVW1 177 aa6.55□□□□□ -1.36
CACNA2D4-216ENST00000543405 ST20-AS1Q8NBB2 130 aa6.55□□□□□ -1.36
CACNA2D4-216ENST00000543405 KRTAP3-1Q9BYR8 98 aa6.55□□□□□ -1.36
CACNA2D4-216ENST00000543405 PCP4P48539 62 aa6.54□□□□□ -1.36
CACNA2D4-216ENST00000543405 HERV-K104P63124 156 aa6.54□□□□□ -1.36
CACNA2D4-216ENST00000543405 MYMXA0A1B0GTQ4 84 aa6.52□□□□□ -1.37
CACNA2D4-216ENST00000543405 LEPROTO15243 131 aa6.52□□□□□ -1.37
CACNA2D4-216ENST00000543405 SPRR1BP22528 89 aa6.52□□□□□ -1.37
CACNA2D4-216ENST00000543405 HRCT1Q6UXD1 115 aa6.52□□□□□ -1.37
CACNA2D4-216ENST00000543405 TTTY13Q9BZ97 58 aa6.51□□□□□ -1.37
CACNA2D4-216ENST00000543405 SPANXB1Q9NS25 103 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 406.5 ms