RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 TIMM17BO60830 172 aa4.26□□□□□ -1.73
PAAF1-212ENST00000543079 COX8AP10176 69 aa4.26□□□□□ -1.73
PAAF1-212ENST00000543079 LINC00158P58513 81 aa4.26□□□□□ -1.73
PAAF1-212ENST00000543079 SRSF9Q13242 221 aaKnown RBP eCLIP4.26□□□□□ -1.73
PAAF1-212ENST00000543079 SPATA45Q537H7 98 aa4.26□□□□□ -1.73
PAAF1-212ENST00000543079 MEIG1Q5JSS6 88 aa4.26□□□□□ -1.73
PAAF1-212ENST00000543079 SCXQ7RTU7 201 aa4.26□□□□□ -1.73
PAAF1-212ENST00000543079 BOD1L2Q8IYS8 172 aa4.26□□□□□ -1.73
PAAF1-212ENST00000543079 MIR7-3HGQ8N6C7 128 aa4.26□□□□□ -1.73
PAAF1-212ENST00000543079 Q8NDZ9 215 aa4.26□□□□□ -1.73
PAAF1-212ENST00000543079 VAMP8Q9BV40 100 aa4.26□□□□□ -1.73
PAAF1-212ENST00000543079 PLAC8Q9NZF1 115 aa4.26□□□□□ -1.73
PAAF1-212ENST00000543079 LINC00474Q9P2X8 69 aa4.26□□□□□ -1.73
PAAF1-212ENST00000543079 PKIGQ9Y2B9 76 aa4.26□□□□□ -1.73
PAAF1-212ENST00000543079 LINC00587B1AMM8 73 aa4.25□□□□□ -1.73
PAAF1-212ENST00000543079 DLEU1O43261 78 aa4.25□□□□□ -1.73
PAAF1-212ENST00000543079 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
PAAF1-212ENST00000543079 DAND5Q8N907 189 aa4.25□□□□□ -1.73
PAAF1-212ENST00000543079 C14orf144Q96I85 54 aa4.25□□□□□ -1.73
PAAF1-212ENST00000543079 LOC107984156A0A0G2JMH3 177 aa4.24□□□□□ -1.73
PAAF1-212ENST00000543079 SMIM6P0DI80 62 aa4.24□□□□□ -1.73
PAAF1-212ENST00000543079 SOSTDC1Q6X4U4 206 aa4.24□□□□□ -1.73
PAAF1-212ENST00000543079 ARL17AQ8IVW1 177 aa4.24□□□□□ -1.73
PAAF1-212ENST00000543079 FAT4Q6V0I7 4981 aa4.24□□□□□ -1.73
PAAF1-212ENST00000543079 SCGB1D4Q6XE38 83 aa4.23□□□□□ -1.73
PAAF1-212ENST00000543079 C2orf91Q6ZV80 131 aa4.23□□□□□ -1.73
PAAF1-212ENST00000543079 DPH3Q96FX2 82 aa4.23□□□□□ -1.73
PAAF1-212ENST00000543079 SPANXDQ9BXN6 97 aa4.23□□□□□ -1.73
PAAF1-212ENST00000543079 SPANXCQ9NY87 97 aa4.23□□□□□ -1.73
PAAF1-212ENST00000543079 PRR3P79522 188 aaKnown RBP4.22□□□□□ -1.73
PAAF1-212ENST00000543079 SLC25A34Q6PIV7 304 aa4.22□□□□□ -1.73
PAAF1-212ENST00000543079 FAM19A5Q7Z5A7 132 aaPredicted RBP4.22□□□□□ -1.73
PAAF1-212ENST00000543079 KRTAP11-1Q8IUC1 163 aa4.22□□□□□ -1.73
PAAF1-212ENST00000543079 LINC00308Q8TCZ7 52 aa4.22□□□□□ -1.73
PAAF1-212ENST00000543079 C22orf24Q9Y442 160 aa4.22□□□□□ -1.73
PAAF1-212ENST00000543079 FAT3Q8TDW7 4589 aa4.22□□□□□ -1.73
PAAF1-212ENST00000543079 PKHD1L1Q86WI1 4243 aa4.22□□□□□ -1.73
PAAF1-212ENST00000543079 TMEM238C9JI98 176 aa4.21□□□□□ -1.74
PAAF1-212ENST00000543079 NPC2P61916 151 aa4.21□□□□□ -1.74
PAAF1-212ENST00000543079 S100A12P80511 92 aa4.21□□□□□ -1.74
PAAF1-212ENST00000543079 PHF5AQ7RTV0 110 aaKnown RBP4.21□□□□□ -1.74
PAAF1-212ENST00000543079 NOTCH2NLQ7Z3S9 236 aa4.21□□□□□ -1.74
PAAF1-212ENST00000543079 SPANXB1Q9NS25 103 aaPredicted RBP4.21□□□□□ -1.74
PAAF1-212ENST00000543079 HIGD1BQ9P298 99 aa4.21□□□□□ -1.74
PAAF1-212ENST00000543079 M0QXV9 152 aa4.2□□□□□ -1.74
PAAF1-212ENST00000543079 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
PAAF1-212ENST00000543079 Q6ZVH6 145 aa4.2□□□□□ -1.74
PAAF1-212ENST00000543079 Q6ZVQ6 151 aa4.2□□□□□ -1.74
PAAF1-212ENST00000543079 MUSTN1Q8IVN3 82 aa4.2□□□□□ -1.74
PAAF1-212ENST00000543079 LINC00518Q8N0U6 118 aa4.2□□□□□ -1.74
PAAF1-212ENST00000543079 C7orf33Q8WU49 177 aa4.2□□□□□ -1.74
PAAF1-212ENST00000543079 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
PAAF1-212ENST00000543079 LINC00167Q96N53 147 aa4.2□□□□□ -1.74
PAAF1-212ENST00000543079 C12orf57Q99622 126 aa4.2□□□□□ -1.74
PAAF1-212ENST00000543079 PPDPFQ9H3Y8 114 aa4.2□□□□□ -1.74
PAAF1-212ENST00000543079 MUC2Q02817 5179 aa4.2□□□□□ -1.74
PAAF1-212ENST00000543079 IGKV2-28A0A075B6P5 120 aa4.19□□□□□ -1.74
PAAF1-212ENST00000543079 NDUFC2O95298 119 aa4.19□□□□□ -1.74
PAAF1-212ENST00000543079 IGKV2D-28P01615 120 aa4.19□□□□□ -1.74
PAAF1-212ENST00000543079 MT1HL1P0DM35 61 aa4.19□□□□□ -1.74
PAAF1-212ENST00000543079 IFITM1P13164 125 aa4.19□□□□□ -1.74
PAAF1-212ENST00000543079 KRTAP10-4P60372 401 aaPredicted RBP4.19□□□□□ -1.74
PAAF1-212ENST00000543079 MRPL55Q7Z7F7 128 aaKnown RBP4.19□□□□□ -1.74
PAAF1-212ENST00000543079 PRO1933Q9H354 126 aa4.19□□□□□ -1.74
PAAF1-212ENST00000543079 UQCR10Q9UDW1 63 aa4.19□□□□□ -1.74
PAAF1-212ENST00000543079 M0R378 163 aa4.18□□□□□ -1.74
PAAF1-212ENST00000543079 NKAPP1Q8N9T2 125 aa4.18□□□□□ -1.74
PAAF1-212ENST00000543079 MIEN1Q9BRT3 115 aa4.18□□□□□ -1.74
PAAF1-212ENST00000543079 KRTAP4-4Q9BYR3 166 aa4.18□□□□□ -1.74
PAAF1-212ENST00000543079 IGLV1-50A0A075B6I6 118 aa4.17□□□□□ -1.74
PAAF1-212ENST00000543079 TRBV10-2A0A0K0K1G8 114 aa4.17□□□□□ -1.74
PAAF1-212ENST00000543079 RPL37AP8A6NKH3 93 aa4.17□□□□□ -1.74
PAAF1-212ENST00000543079 NCR3O14931 201 aa4.17□□□□□ -1.74
PAAF1-212ENST00000543079 LINC00337Q8N6G1 96 aa4.17□□□□□ -1.74
PAAF1-212ENST00000543079 HIST1H4GQ99525 98 aa4.17□□□□□ -1.74
PAAF1-212ENST00000543079 PSORS1C2Q9UIG4 136 aa4.17□□□□□ -1.74
PAAF1-212ENST00000543079 TRBV10-3A0A0K0K1G6 114 aa4.16□□□□□ -1.74
PAAF1-212ENST00000543079 IGLV6-57P01721 117 aa4.16□□□□□ -1.74
PAAF1-212ENST00000543079 TAL2Q16559 108 aa4.16□□□□□ -1.74
PAAF1-212ENST00000543079 COPS9Q8WXC6 57 aa4.16□□□□□ -1.74
PAAF1-212ENST00000543079 FAM218AQ96MZ4 157 aa4.16□□□□□ -1.74
PAAF1-212ENST00000543079 UBE2BP63146 152 aa4.15□□□□□ -1.75
PAAF1-212ENST00000543079 HSD52Q0P140 79 aa4.15□□□□□ -1.75
PAAF1-212ENST00000543079 CEND1Q8N111 149 aa4.15□□□□□ -1.75
PAAF1-212ENST00000543079 KCNQ1DNQ9H478 68 aa4.15□□□□□ -1.75
PAAF1-212ENST00000543079 KRTAP4-16G5E9R7 235 aaPredicted RBP4.14□□□□□ -1.75
PAAF1-212ENST00000543079 DDTP30046 118 aa4.14□□□□□ -1.75
PAAF1-212ENST00000543079 SPRR1AP35321 89 aa4.14□□□□□ -1.75
PAAF1-212ENST00000543079 HNRNPA3P51991 378 aaKnown RBP4.14□□□□□ -1.75
PAAF1-212ENST00000543079 FXYD2P54710 66 aa4.14□□□□□ -1.75
PAAF1-212ENST00000543079 RPL37AP61513 92 aaKnown RBP4.14□□□□□ -1.75
PAAF1-212ENST00000543079 CRCT1Q9UGL9 99 aa4.14□□□□□ -1.75
PAAF1-212ENST00000543079 KRTAP16-1A8MUX0 517 aa4.13□□□□□ -1.75
PAAF1-212ENST00000543079 TSTD3H0UI37 97 aa4.13□□□□□ -1.75
PAAF1-212ENST00000543079 C1orf137Q5JT78 98 aa4.13□□□□□ -1.75
PAAF1-212ENST00000543079 REG3GQ6UW15 175 aa4.13□□□□□ -1.75
PAAF1-212ENST00000543079 KRTAP13-1Q8IUC0 172 aa4.13□□□□□ -1.75
PAAF1-212ENST00000543079 TMEM126AQ9H061 195 aa4.13□□□□□ -1.75
PAAF1-212ENST00000543079 TNXBP22105 4242 aa4.12□□□□□ -1.75
PAAF1-212ENST00000543079 BCE1O60756 84 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms