RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 LINC00526Q96FQ7 95 aa2.76□□□□□ -1.97
MDM2-228ENST00000542502 TP73-AS1Q9UF72 201 aa2.76□□□□□ -1.97
MDM2-228ENST00000542502 A0A096LNI7 61 aa2.75□□□□□ -1.97
MDM2-228ENST00000542502 IGKV2D-26A0A0A0MRZ7 120 aa2.75□□□□□ -1.97
MDM2-228ENST00000542502 IGKV2-24A0A0C4DH68 120 aa2.75□□□□□ -1.97
MDM2-228ENST00000542502 TMEM238C9JI98 176 aa2.75□□□□□ -1.97
MDM2-228ENST00000542502 SCGB1D4Q6XE38 83 aa2.75□□□□□ -1.97
MDM2-228ENST00000542502 NKAPP1Q8N9T2 125 aa2.75□□□□□ -1.97
MDM2-228ENST00000542502 CIRBP-AS1Q8TBR5 109 aa2.75□□□□□ -1.97
MDM2-228ENST00000542502 PMCHL2Q9BQD1 86 aa2.75□□□□□ -1.97
MDM2-228ENST00000542502 LOC107984156A0A0G2JMH3 177 aa2.74□□□□□ -1.97
MDM2-228ENST00000542502 ZNF815PA8K554 130 aa2.74□□□□□ -1.97
MDM2-228ENST00000542502 DLEU1O43261 78 aa2.74□□□□□ -1.97
MDM2-228ENST00000542502 NDUFC2O95298 119 aa2.74□□□□□ -1.97
MDM2-228ENST00000542502 IFITM1P13164 125 aa2.74□□□□□ -1.97
MDM2-228ENST00000542502 PFN2P35080 140 aa2.74□□□□□ -1.97
MDM2-228ENST00000542502 JOSD1Q15040 202 aaPredicted RBP2.74□□□□□ -1.97
MDM2-228ENST00000542502 PRR4Q16378 134 aa2.74□□□□□ -1.97
MDM2-228ENST00000542502 C9orf116Q5BN46 136 aaPredicted RBP2.74□□□□□ -1.97
MDM2-228ENST00000542502 SCXQ7RTU7 201 aa2.74□□□□□ -1.97
MDM2-228ENST00000542502 ARL17AQ8IVW1 177 aa2.74□□□□□ -1.97
MDM2-228ENST00000542502 VAMP8Q9BV40 100 aa2.74□□□□□ -1.97
MDM2-228ENST00000542502 IGLV8-61A0A075B6I0 122 aa2.73□□□□□ -1.97
MDM2-228ENST00000542502 TRBV10-2A0A0K0K1G8 114 aa2.73□□□□□ -1.97
MDM2-228ENST00000542502 FAM168BA1KXE4 195 aa2.73□□□□□ -1.97
MDM2-228ENST00000542502 M0R378 163 aa2.73□□□□□ -1.97
MDM2-228ENST00000542502 MRPL55Q7Z7F7 128 aaKnown RBP2.73□□□□□ -1.97
MDM2-228ENST00000542502 SND1-IT1Q9HBX3 110 aa2.73□□□□□ -1.97
MDM2-228ENST00000542502 M0QXV9 152 aa2.72□□□□□ -1.97
MDM2-228ENST00000542502 CHTF8P0CG12 524 aa2.72□□□□□ -1.97
MDM2-228ENST00000542502 SMIM13P0DJ93 91 aa2.72□□□□□ -1.97
MDM2-228ENST00000542502 RPL37AP61513 92 aaKnown RBP2.72□□□□□ -1.97
MDM2-228ENST00000542502 UBE2BP63146 152 aa2.72□□□□□ -1.97
MDM2-228ENST00000542502 MIR7-3HGQ8N6C7 128 aa2.72□□□□□ -1.97
MDM2-228ENST00000542502 SPANXDQ9BXN6 97 aa2.72□□□□□ -1.97
MDM2-228ENST00000542502 XAGE1AQ9HD64 81 aa2.72□□□□□ -1.97
MDM2-228ENST00000542502 SPANXB1Q9NS25 103 aaPredicted RBP2.72□□□□□ -1.97
MDM2-228ENST00000542502 SPANXCQ9NY87 97 aa2.72□□□□□ -1.97
MDM2-228ENST00000542502 A0A1W2PNN7 141 aa2.71□□□□□ -1.98
MDM2-228ENST00000542502 COX8AP10176 69 aa2.71□□□□□ -1.98
MDM2-228ENST00000542502 FUSP35637 526 aaKnown RBP eCLIP2.71□□□□□ -1.98
MDM2-228ENST00000542502 HINT1P49773 126 aaPredicted RBP2.71□□□□□ -1.98
MDM2-228ENST00000542502 TSPEAR-AS2P59090 65 aa2.71□□□□□ -1.98
MDM2-228ENST00000542502 SPATA45Q537H7 98 aa2.71□□□□□ -1.98
MDM2-228ENST00000542502 C9orf129Q5T035 196 aaKnown RBP2.71□□□□□ -1.98
MDM2-228ENST00000542502 SLC25A34Q6PIV7 304 aa2.71□□□□□ -1.98
MDM2-228ENST00000542502 FAM19A5Q7Z5A7 132 aaPredicted RBP2.71□□□□□ -1.98
MDM2-228ENST00000542502 ATOH7Q8N100 152 aa2.71□□□□□ -1.98
MDM2-228ENST00000542502 HIGD1BQ9P298 99 aa2.71□□□□□ -1.98
MDM2-228ENST00000542502 C22orf24Q9Y442 160 aa2.71□□□□□ -1.98
MDM2-228ENST00000542502 DNAH11Q96DT5 4516 aa2.71□□□□□ -1.98
MDM2-228ENST00000542502 TRAV13-2A0A0B4J235 113 aa2.7□□□□□ -1.98
MDM2-228ENST00000542502 A0A1B0GWB2 263 aa2.7□□□□□ -1.98
MDM2-228ENST00000542502 PANO1I0J062 215 aa2.7□□□□□ -1.98
MDM2-228ENST00000542502 SMIM6P0DI80 62 aa2.7□□□□□ -1.98
MDM2-228ENST00000542502 RPL28P46779 137 aaKnown RBP2.7□□□□□ -1.98
MDM2-228ENST00000542502 TAL2Q16559 108 aa2.7□□□□□ -1.98
MDM2-228ENST00000542502 S100A7L2Q5SY68 101 aa2.7□□□□□ -1.98
MDM2-228ENST00000542502 Q5VSD8 79 aa2.7□□□□□ -1.98
MDM2-228ENST00000542502 SPINK6Q6UWN8 80 aa2.7□□□□□ -1.98
MDM2-228ENST00000542502 LINC00308Q8TCZ7 52 aa2.7□□□□□ -1.98
MDM2-228ENST00000542502 DIRC1Q969H9 104 aa2.7□□□□□ -1.98
MDM2-228ENST00000542502 LINC00167Q96N53 147 aa2.7□□□□□ -1.98
MDM2-228ENST00000542502 TMEM126AQ9H061 195 aa2.7□□□□□ -1.98
MDM2-228ENST00000542502 EPPK1P58107 5090 aaKnown RBP2.69□□□□□ -1.98
MDM2-228ENST00000542502 IGLV1-50A0A075B6I6 118 aa2.69□□□□□ -1.98
MDM2-228ENST00000542502 PCP4L1A6NKN8 68 aa2.69□□□□□ -1.98
MDM2-228ENST00000542502 H0Y9J4 135 aa2.69□□□□□ -1.98
MDM2-228ENST00000542502 SNCGO76070 127 aa2.69□□□□□ -1.98
MDM2-228ENST00000542502 SMR3BP02814 79 aaPredicted RBP2.69□□□□□ -1.98
MDM2-228ENST00000542502 HNRNPA3P51991 378 aaKnown RBP2.69□□□□□ -1.98
MDM2-228ENST00000542502 PRR3P79522 188 aaKnown RBP2.69□□□□□ -1.98
MDM2-228ENST00000542502 PYY3Q5JQD4 70 aa2.69□□□□□ -1.98
MDM2-228ENST00000542502 PCP2Q8IVA1 136 aa2.69□□□□□ -1.98
MDM2-228ENST00000542502 LINC00337Q8N6G1 96 aa2.69□□□□□ -1.98
MDM2-228ENST00000542502 HIST1H4GQ99525 98 aa2.69□□□□□ -1.98
MDM2-228ENST00000542502 KCNQ1DNQ9H478 68 aa2.69□□□□□ -1.98
MDM2-228ENST00000542502 UQCR10Q9UDW1 63 aa2.69□□□□□ -1.98
MDM2-228ENST00000542502 TRBV7-6A0A0J9YX20 115 aa2.68□□□□□ -1.98
MDM2-228ENST00000542502 BCE1O60756 84 aa2.68□□□□□ -1.98
MDM2-228ENST00000542502 OXTP01178 125 aa2.68□□□□□ -1.98
MDM2-228ENST00000542502 IGLV6-57P01721 117 aa2.68□□□□□ -1.98
MDM2-228ENST00000542502 DDTP30046 118 aa2.68□□□□□ -1.98
MDM2-228ENST00000542502 VAMP3Q15836 100 aa2.68□□□□□ -1.98
MDM2-228ENST00000542502 C1orf137Q5JT78 98 aa2.68□□□□□ -1.98
MDM2-228ENST00000542502 PHF5AQ7RTV0 110 aaKnown RBP2.68□□□□□ -1.98
MDM2-228ENST00000542502 MTURNQ8N3F0 131 aa2.68□□□□□ -1.98
MDM2-228ENST00000542502 ANAPC11Q9NYG5 84 aa2.68□□□□□ -1.98
MDM2-228ENST00000542502 PSORS1C2Q9UIG4 136 aa2.68□□□□□ -1.98
MDM2-228ENST00000542502 DNAH5Q8TE73 4624 aa2.68□□□□□ -1.98
MDM2-228ENST00000542502 DMBT1Q9UGM3 2413 aaPredicted RBP2.68□□□□□ -1.98
MDM2-228ENST00000542502 IGKV2-28A0A075B6P5 120 aa2.67□□□□□ -1.98
MDM2-228ENST00000542502 TRAV23DV6A0A075B6W5 121 aa2.67□□□□□ -1.98
MDM2-228ENST00000542502 ETDCA0A1B0GVM5 59 aa2.67□□□□□ -1.98
MDM2-228ENST00000542502 TSTD3H0UI37 97 aa2.67□□□□□ -1.98
MDM2-228ENST00000542502 ZNF861PO60384 105 aa2.67□□□□□ -1.98
MDM2-228ENST00000542502 IGKV2D-28P01615 120 aa2.67□□□□□ -1.98
MDM2-228ENST00000542502 IGLV7-43P04211 117 aa2.67□□□□□ -1.98
MDM2-228ENST00000542502 INAFM2P0DMQ5 153 aa2.67□□□□□ -1.98
MDM2-228ENST00000542502 UBE2AP49459 152 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms