RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 TRAV23DV6A0A075B6W5 121 aa3.45□□□□□ -1.86
ATPAF1-212ENST00000542495 VPREB1P12018 145 aa3.45□□□□□ -1.86
ATPAF1-212ENST00000542495 PDE6GP18545 87 aa3.45□□□□□ -1.86
ATPAF1-212ENST00000542495 ELOF1P60002 83 aaKnown RBP3.44□□□□□ -1.86
ATPAF1-212ENST00000542495 EGFEM1PQ0D2K5 195 aa3.44□□□□□ -1.86
ATPAF1-212ENST00000542495 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.44□□□□□ -1.86
ATPAF1-212ENST00000542495 Q6ZQY7 126 aa3.44□□□□□ -1.86
ATPAF1-212ENST00000542495 WFDC10BQ8IUB3 73 aa3.44□□□□□ -1.86
ATPAF1-212ENST00000542495 DIRC1Q969H9 104 aa3.44□□□□□ -1.86
ATPAF1-212ENST00000542495 UBL5Q9BZL1 73 aa3.44□□□□□ -1.86
ATPAF1-212ENST00000542495 NBEAL2Q6ZNJ1 2754 aa3.44□□□□□ -1.86
ATPAF1-212ENST00000542495 VWFP04275 2813 aa3.44□□□□□ -1.86
ATPAF1-212ENST00000542495 TENM1Q9UKZ4 2725 aa3.43□□□□□ -1.86
ATPAF1-212ENST00000542495 M0R2N4 97 aa3.43□□□□□ -1.86
ATPAF1-212ENST00000542495 ZNF73O43830 326 aaPredicted RBP3.43□□□□□ -1.86
ATPAF1-212ENST00000542495 BCE1O60756 84 aa3.43□□□□□ -1.86
ATPAF1-212ENST00000542495 COX7BP24311 80 aa3.43□□□□□ -1.86
ATPAF1-212ENST00000542495 KPRPQ5T749 579 aaPredicted RBP3.43□□□□□ -1.86
ATPAF1-212ENST00000542495 FAM19A1Q7Z5A9 133 aa3.43□□□□□ -1.86
ATPAF1-212ENST00000542495 C15orf56Q8N910 161 aa3.43□□□□□ -1.86
ATPAF1-212ENST00000542495 CYSTM1Q9H1C7 97 aa3.43□□□□□ -1.86
ATPAF1-212ENST00000542495 XAGE1AQ9HD64 81 aa3.43□□□□□ -1.86
ATPAF1-212ENST00000542495 TRBV7-4A0A0J9YYF1 115 aa3.43□□□□□ -1.86
ATPAF1-212ENST00000542495 M0R378 163 aa3.43□□□□□ -1.86
ATPAF1-212ENST00000542495 RPS28P62857 69 aaKnown RBP3.43□□□□□ -1.86
ATPAF1-212ENST00000542495 CAMK2N2Q96S95 79 aa3.43□□□□□ -1.86
ATPAF1-212ENST00000542495 DSCR8Q96T75 97 aa3.43□□□□□ -1.86
ATPAF1-212ENST00000542495 LAMTOR3Q9UHA4 124 aa3.43□□□□□ -1.86
ATPAF1-212ENST00000542495 MGAM2Q2M2H8 2515 aa3.42□□□□□ -1.86
ATPAF1-212ENST00000542495 NDUFC2-KCTD14E9PQ53 114 aa3.42□□□□□ -1.86
ATPAF1-212ENST00000542495 KRTAP10-11P60412 298 aa3.42□□□□□ -1.86
ATPAF1-212ENST00000542495 TMEM258P61165 79 aa3.42□□□□□ -1.86
ATPAF1-212ENST00000542495 ESRGQ1W209 222 aa3.42□□□□□ -1.86
ATPAF1-212ENST00000542495 HIGD2BQ4VC39 106 aa3.42□□□□□ -1.86
ATPAF1-212ENST00000542495 Q6ZRU5 148 aa3.42□□□□□ -1.86
ATPAF1-212ENST00000542495 Q6ZVQ6 151 aa3.42□□□□□ -1.86
ATPAF1-212ENST00000542495 TRRAPQ9Y4A5 3859 aa3.41□□□□□ -1.86
ATPAF1-212ENST00000542495 LINC01547P58512 204 aaPredicted RBP3.41□□□□□ -1.86
ATPAF1-212ENST00000542495 CXCL6P80162 114 aa3.41□□□□□ -1.86
ATPAF1-212ENST00000542495 LINC01556Q5JQF7 62 aa3.41□□□□□ -1.86
ATPAF1-212ENST00000542495 Q6ZTC4 211 aa3.41□□□□□ -1.86
ATPAF1-212ENST00000542495 RETNQ9HD89 108 aa3.41□□□□□ -1.86
ATPAF1-212ENST00000542495 MEGF8Q7Z7M0 2845 aa3.41□□□□□ -1.86
ATPAF1-212ENST00000542495 KRTAP3-1Q9BYR8 98 aa3.4□□□□□ -1.86
ATPAF1-212ENST00000542495 J3KT08 172 aa3.4□□□□□ -1.87
ATPAF1-212ENST00000542495 Q6ZRP5 223 aa3.4□□□□□ -1.87
ATPAF1-212ENST00000542495 KCNQ1DNQ9H478 68 aa3.4□□□□□ -1.87
ATPAF1-212ENST00000542495 PKD1L1Q8TDX9 2849 aa3.39□□□□□ -1.87
ATPAF1-212ENST00000542495 TRAV7A0A075B6U4 112 aa3.39□□□□□ -1.87
ATPAF1-212ENST00000542495 TLX1NBP0CAT3 122 aa3.39□□□□□ -1.87
ATPAF1-212ENST00000542495 DNAH10OSP0CZ25 163 aa3.39□□□□□ -1.87
ATPAF1-212ENST00000542495 SYCNQ0VAF6 134 aa3.39□□□□□ -1.87
ATPAF1-212ENST00000542495 DPH3Q96FX2 82 aa3.39□□□□□ -1.87
ATPAF1-212ENST00000542495 CMYA5Q8N3K9 4069 aa3.39□□□□□ -1.87
ATPAF1-212ENST00000542495 DNAH3Q8TD57 4116 aa3.39□□□□□ -1.87
ATPAF1-212ENST00000542495 LOC107984640A0A0U1RRK4 108 aa3.38□□□□□ -1.87
ATPAF1-212ENST00000542495 DNAH1Q9P2D7 4330 aa3.38□□□□□ -1.87
ATPAF1-212ENST00000542495 IGLV5-37A0A075B6J1 123 aa3.38□□□□□ -1.87
ATPAF1-212ENST00000542495 DEFB131BA0A096LNP1 70 aa3.38□□□□□ -1.87
ATPAF1-212ENST00000542495 TRAV10A0A0B4J240 114 aa3.38□□□□□ -1.87
ATPAF1-212ENST00000542495 HAMPP81172 84 aa3.38□□□□□ -1.87
ATPAF1-212ENST00000542495 TGP01266 2768 aa3.37□□□□□ -1.87
ATPAF1-212ENST00000542495 IGKV2D-24A0A075B6R9 120 aa3.37□□□□□ -1.87
ATPAF1-212ENST00000542495 KRTAP4-16G5E9R7 235 aaPredicted RBP3.37□□□□□ -1.87
ATPAF1-212ENST00000542495 C11orf45Q8TAV5 145 aa3.37□□□□□ -1.87
ATPAF1-212ENST00000542495 C7orf33Q8WU49 177 aa3.37□□□□□ -1.87
ATPAF1-212ENST00000542495 IGLV5-48A0A075B6I7 105 aa3.36□□□□□ -1.87
ATPAF1-212ENST00000542495 OXTP01178 125 aa3.36□□□□□ -1.87
ATPAF1-212ENST00000542495 SPRR1AP35321 89 aa3.36□□□□□ -1.87
ATPAF1-212ENST00000542495 KLKP1Q107X0 134 aa3.36□□□□□ -1.87
ATPAF1-212ENST00000542495 FAM19A5Q7Z5A7 132 aaPredicted RBP3.36□□□□□ -1.87
ATPAF1-212ENST00000542495 C20orf197Q8N268 126 aa3.36□□□□□ -1.87
ATPAF1-212ENST00000542495 H7BZZ5 65 aa3.35□□□□□ -1.87
ATPAF1-212ENST00000542495 Q8N377 158 aa3.35□□□□□ -1.87
ATPAF1-212ENST00000542495 IGLV1-50A0A075B6I6 118 aa3.35□□□□□ -1.87
ATPAF1-212ENST00000542495 A0A1B0GW54 56 aa3.35□□□□□ -1.87
ATPAF1-212ENST00000542495 EPM2AB3EWF7 344 aa3.35□□□□□ -1.87
ATPAF1-212ENST00000542495 Q6ZRX8 168 aa3.35□□□□□ -1.87
ATPAF1-212ENST00000542495 KRTAP7-1Q8IUC3 87 aa3.35□□□□□ -1.87
ATPAF1-212ENST00000542495 NKAPP1Q8N9T2 125 aa3.35□□□□□ -1.87
ATPAF1-212ENST00000542495 DHRS4-AS1Q9P1J3 65 aa3.35□□□□□ -1.87
ATPAF1-212ENST00000542495 PRKDCP78527 4128 aaKnown RBP3.34□□□□□ -1.87
ATPAF1-212ENST00000542495 ERC2-IT1O76042 136 aa3.34□□□□□ -1.87
ATPAF1-212ENST00000542495 IGKV4-1P06312 121 aa3.34□□□□□ -1.87
ATPAF1-212ENST00000542495 SCXQ7RTU7 201 aa3.34□□□□□ -1.87
ATPAF1-212ENST00000542495 MRAPQ8TCY5 172 aa3.34□□□□□ -1.87
ATPAF1-212ENST00000542495 Q9BRP9 147 aa3.34□□□□□ -1.87
ATPAF1-212ENST00000542495 LINC00588Q9Y4M8 146 aa3.34□□□□□ -1.87
ATPAF1-212ENST00000542495 FAM236DA0A1B0GTK5 79 aa3.33□□□□□ -1.88
ATPAF1-212ENST00000542495 FAM236CP0DP71 79 aa3.33□□□□□ -1.88
ATPAF1-212ENST00000542495 CASC10Q5T4H9 136 aa3.33□□□□□ -1.88
ATPAF1-212ENST00000542495 FAM168BA1KXE4 195 aa3.33□□□□□ -1.88
ATPAF1-212ENST00000542495 NREPQ16612 68 aa3.33□□□□□ -1.88
ATPAF1-212ENST00000542495 TM2D3Q9BRN9 247 aa3.33□□□□□ -1.88
ATPAF1-212ENST00000542495 NOTCH1P46531 2555 aa3.33□□□□□ -1.88
ATPAF1-212ENST00000542495 A0A1W2PNM2 257 aa3.32□□□□□ -1.88
ATPAF1-212ENST00000542495 BPY2O14599 106 aa3.32□□□□□ -1.88
ATPAF1-212ENST00000542495 NDUFC1O43677 76 aa3.32□□□□□ -1.88
ATPAF1-212ENST00000542495 DEFB105AQ8NG35 78 aa3.32□□□□□ -1.88
ATPAF1-212ENST00000542495 RMI2Q96E14 147 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms