RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 DIRC1Q969H9 104 aa11.29□□□□□ -0.6
SPIDR-227ENST00000541342 ZNF73O43830 326 aaPredicted RBP11.28□□□□□ -0.6
SPIDR-227ENST00000541342 TRBV7-4A0A0J9YYF1 115 aa11.27□□□□□ -0.61
SPIDR-227ENST00000541342 ELOF1P60002 83 aaKnown RBP11.26□□□□□ -0.61
SPIDR-227ENST00000541342 VPREB1P12018 145 aa11.26□□□□□ -0.61
SPIDR-227ENST00000541342 HIGD2BQ4VC39 106 aa11.26□□□□□ -0.61
SPIDR-227ENST00000541342 C15orf56Q8N910 161 aa11.26□□□□□ -0.61
SPIDR-227ENST00000541342 C1orf43Q9BWL3 253 aa11.26□□□□□ -0.61
SPIDR-227ENST00000541342 HAMPP81172 84 aa11.25□□□□□ -0.61
SPIDR-227ENST00000541342 C20orf197Q8N268 126 aa11.25□□□□□ -0.61
SPIDR-227ENST00000541342 DNAH7Q8WXX0 4024 aa11.25□□□□□ -0.61
SPIDR-227ENST00000541342 IGKV2D-24A0A075B6R9 120 aa11.25□□□□□ -0.61
SPIDR-227ENST00000541342 COX7BP24311 80 aa11.24□□□□□ -0.61
SPIDR-227ENST00000541342 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-227ENST00000541342 PDE6GP18545 87 aa11.23□□□□□ -0.61
SPIDR-227ENST00000541342 PLECQ15149 4684 aaKnown RBP11.23□□□□□ -0.61
SPIDR-227ENST00000541342 CXCL6P80162 114 aa11.22□□□□□ -0.61
SPIDR-227ENST00000541342 H3BQ85 93 aa11.21□□□□□ -0.61
SPIDR-227ENST00000541342 Q6ZRU5 148 aa11.21□□□□□ -0.61
SPIDR-227ENST00000541342 DNAH10Q8IVF4 4471 aa11.21□□□□□ -0.61
SPIDR-227ENST00000541342 MEGF8Q7Z7M0 2845 aa11.21□□□□□ -0.62
SPIDR-227ENST00000541342 CAMK2N2Q96S95 79 aa11.2□□□□□ -0.62
SPIDR-227ENST00000541342 TRAV7A0A075B6U4 112 aa11.2□□□□□ -0.62
SPIDR-227ENST00000541342 TRBV7-6A0A0J9YX20 115 aa11.2□□□□□ -0.62
SPIDR-227ENST00000541342 NDUFC2-KCTD14E9PQ53 114 aa11.2□□□□□ -0.62
SPIDR-227ENST00000541342 BCE1O60756 84 aa11.19□□□□□ -0.62
SPIDR-227ENST00000541342 SCXQ7RTU7 201 aa11.19□□□□□ -0.62
SPIDR-227ENST00000541342 H7BZZ5 65 aa11.19□□□□□ -0.62
SPIDR-227ENST00000541342 LINC00528Q8N1L1 170 aa11.19□□□□□ -0.62
SPIDR-227ENST00000541342 CASC10Q5T4H9 136 aa11.17□□□□□ -0.62
SPIDR-227ENST00000541342 M0R378 163 aa11.17□□□□□ -0.62
SPIDR-227ENST00000541342 APLNQ9ULZ1 77 aa11.16□□□□□ -0.62
SPIDR-227ENST00000541342 Q6ZRP5 223 aa11.15□□□□□ -0.62
SPIDR-227ENST00000541342 STARD9Q9P2P6 4700 aa11.15□□□□□ -0.62
SPIDR-227ENST00000541342 TENM2Q9NT68 2774 aa11.15□□□□□ -0.62
SPIDR-227ENST00000541342 Q5XG85 94 aa11.15□□□□□ -0.62
SPIDR-227ENST00000541342 KLKP1Q107X0 134 aa11.14□□□□□ -0.63
SPIDR-227ENST00000541342 KRTAP1-5Q9BYS1 174 aa11.12□□□□□ -0.63
SPIDR-227ENST00000541342 SNURFQ9Y675 71 aa11.12□□□□□ -0.63
SPIDR-227ENST00000541342 FAM236DA0A1B0GTK5 79 aa11.12□□□□□ -0.63
SPIDR-227ENST00000541342 FAM236CP0DP71 79 aa11.12□□□□□ -0.63
SPIDR-227ENST00000541342 C4orf26Q17RF5 130 aa11.11□□□□□ -0.63
SPIDR-227ENST00000541342 RMI2Q96E14 147 aa11.11□□□□□ -0.63
SPIDR-227ENST00000541342 C5orf47Q569G3 176 aa11.11□□□□□ -0.63
SPIDR-227ENST00000541342 EPM2AB3EWF7 344 aa11.1□□□□□ -0.63
SPIDR-227ENST00000541342 SYCNQ0VAF6 134 aa11.09□□□□□ -0.63
SPIDR-227ENST00000541342 Q8N9L7 120 aa11.09□□□□□ -0.63
SPIDR-227ENST00000541342 F8WDY8 70 aa11.08□□□□□ -0.64
SPIDR-227ENST00000541342 SERTAD4-AS1Q5TG53 156 aa11.07□□□□□ -0.64
SPIDR-227ENST00000541342 UBE2DNLQ8IWF7 75 aa11.07□□□□□ -0.64
SPIDR-227ENST00000541342 VPS13DQ5THJ4 4388 aa11.05□□□□□ -0.64
SPIDR-227ENST00000541342 KCNQ1DNQ9H478 68 aa11.05□□□□□ -0.64
SPIDR-227ENST00000541342 IGKV4-1P06312 121 aa11.04□□□□□ -0.64
SPIDR-227ENST00000541342 NUPR2A6NF83 97 aa11.04□□□□□ -0.64
SPIDR-227ENST00000541342 F8WEM9 126 aa11.04□□□□□ -0.64
SPIDR-227ENST00000541342 Q8N377 158 aa11.04□□□□□ -0.64
SPIDR-227ENST00000541342 C7orf33Q8WU49 177 aa11.03□□□□□ -0.64
SPIDR-227ENST00000541342 BPY2O14599 106 aa11.02□□□□□ -0.64
SPIDR-227ENST00000541342 NREPQ16612 68 aa11.02□□□□□ -0.65
SPIDR-227ENST00000541342 HRCT1Q6UXD1 115 aa11.02□□□□□ -0.65
SPIDR-227ENST00000541342 SERP1Q9Y6X1 66 aa11.02□□□□□ -0.65
SPIDR-227ENST00000541342 C3orf84H3BNL1 204 aa11.01□□□□□ -0.65
SPIDR-227ENST00000541342 DEFB105AQ8NG35 78 aa11□□□□□ -0.65
SPIDR-227ENST00000541342 IGLV5-48A0A075B6I7 105 aa10.99□□□□□ -0.65
SPIDR-227ENST00000541342 TLX1NBP0CAT3 122 aa10.99□□□□□ -0.65
SPIDR-227ENST00000541342 NKAPP1Q8N9T2 125 aa10.98□□□□□ -0.65
SPIDR-227ENST00000541342 Q9BRP9 147 aa10.98□□□□□ -0.65
SPIDR-227ENST00000541342 FAM168BA1KXE4 195 aa10.97□□□□□ -0.65
SPIDR-227ENST00000541342 KRTAP4-16G5E9R7 235 aaPredicted RBP10.97□□□□□ -0.65
SPIDR-227ENST00000541342 OCR1Q9BZK8 76 aa10.97□□□□□ -0.65
SPIDR-227ENST00000541342 KRTAP7-1Q8IUC3 87 aa10.96□□□□□ -0.65
SPIDR-227ENST00000541342 TMEM254Q8TBM7 123 aa10.96□□□□□ -0.65
SPIDR-227ENST00000541342 RPL37AP8A6NKH3 93 aa10.95□□□□□ -0.66
SPIDR-227ENST00000541342 Q6ZRX8 168 aa10.95□□□□□ -0.66
SPIDR-227ENST00000541342 KMT2AQ03164 3969 aa10.94□□□□□ -0.66
SPIDR-227ENST00000541342 FBN3Q75N90 2809 aa10.94□□□□□ -0.66
SPIDR-227ENST00000541342 A0A1W2PNM2 257 aa10.93□□□□□ -0.66
SPIDR-227ENST00000541342 TNP2Q05952 138 aa10.93□□□□□ -0.66
SPIDR-227ENST00000541342 NBDYA0A0U1RRE5 68 aa10.93□□□□□ -0.66
SPIDR-227ENST00000541342 PSCAO43653 123 aa10.93□□□□□ -0.66
SPIDR-227ENST00000541342 NDUFC1O43677 76 aa10.93□□□□□ -0.66
SPIDR-227ENST00000541342 ERC2-IT1O76042 136 aa10.93□□□□□ -0.66
SPIDR-227ENST00000541342 KRTAP21-3Q3LHN1 58 aa10.92□□□□□ -0.66
SPIDR-227ENST00000541342 FP248Q71RG6 208 aaPredicted RBP10.92□□□□□ -0.66
SPIDR-227ENST00000541342 ST20-AS1Q8NBB2 130 aa10.92□□□□□ -0.66
SPIDR-227ENST00000541342 PLA2G2DQ9UNK4 145 aa10.92□□□□□ -0.66
SPIDR-227ENST00000541342 IGLV1-50A0A075B6I6 118 aa10.91□□□□□ -0.66
SPIDR-227ENST00000541342 SPRR1AP35321 89 aa10.91□□□□□ -0.66
SPIDR-227ENST00000541342 DNAH2Q9P225 4427 aa10.89□□□□□ -0.67
SPIDR-227ENST00000541342 A0A0U1RQV1 116 aa10.89□□□□□ -0.67
SPIDR-227ENST00000541342 DHRS4-AS1Q9P1J3 65 aa10.89□□□□□ -0.67
SPIDR-227ENST00000541342 IGLV5-37A0A075B6J1 123 aa10.88□□□□□ -0.67
SPIDR-227ENST00000541342 CNBPP62633 177 aaKnown RBP10.87□□□□□ -0.67
SPIDR-227ENST00000541342 Q6ZRN7 208 aaPredicted RBP10.87□□□□□ -0.67
SPIDR-227ENST00000541342 PRYO14603 147 aa10.87□□□□□ -0.67
SPIDR-227ENST00000541342 C1orf137Q5JT78 98 aa10.86□□□□□ -0.67
SPIDR-227ENST00000541342 LRCOL1A6NCL2 159 aa10.86□□□□□ -0.67
SPIDR-227ENST00000541342 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.85□□□□□ -0.67
SPIDR-227ENST00000541342 FUSP35637 526 aaKnown RBP eCLIP10.85□□□□□ -0.67
SPIDR-227ENST00000541342 LINC00474Q9P2X8 69 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms