RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 PRYO14603 147 aa11.17□□□□□ -0.62
CLIP1-215ENST00000541108 CLEC2BQ92478 149 aa11.17□□□□□ -0.62
CLIP1-215ENST00000541108 DNAH11Q96DT5 4516 aa11.17□□□□□ -0.62
CLIP1-215ENST00000541108 A0A087WYN8 130 aa11.17□□□□□ -0.62
CLIP1-215ENST00000541108 RYR2Q92736 4967 aa11.16□□□□□ -0.62
CLIP1-215ENST00000541108 PLAC8Q9NZF1 115 aa11.16□□□□□ -0.62
CLIP1-215ENST00000541108 A0A1B0GX51 115 aa11.14□□□□□ -0.63
CLIP1-215ENST00000541108 SPRR1AP35321 89 aa11.14□□□□□ -0.63
CLIP1-215ENST00000541108 TRACP01848 142 aa11.14□□□□□ -0.63
CLIP1-215ENST00000541108 PHF5AQ7RTV0 110 aaKnown RBP11.14□□□□□ -0.63
CLIP1-215ENST00000541108 FAM218AQ96MZ4 157 aa11.14□□□□□ -0.63
CLIP1-215ENST00000541108 ELOF1P60002 83 aaKnown RBP11.13□□□□□ -0.63
CLIP1-215ENST00000541108 PKD1P98161 4303 aa11.13□□□□□ -0.63
CLIP1-215ENST00000541108 A0A1B0GVY2 172 aa11.12□□□□□ -0.63
CLIP1-215ENST00000541108 SNCGO76070 127 aa11.12□□□□□ -0.63
CLIP1-215ENST00000541108 COX7BP24311 80 aa11.12□□□□□ -0.63
CLIP1-215ENST00000541108 Q6ZSA8 131 aa11.12□□□□□ -0.63
CLIP1-215ENST00000541108 KRTAP4-16G5E9R7 235 aaPredicted RBP11.11□□□□□ -0.63
CLIP1-215ENST00000541108 REG3GQ6UW15 175 aa11.11□□□□□ -0.63
CLIP1-215ENST00000541108 F8W1H4 67 aa11.11□□□□□ -0.63
CLIP1-215ENST00000541108 KRTAP10-1P60331 282 aa11.11□□□□□ -0.63
CLIP1-215ENST00000541108 UBE2BP63146 152 aa11.11□□□□□ -0.63
CLIP1-215ENST00000541108 LINC00575Q6W349 94 aa11.11□□□□□ -0.63
CLIP1-215ENST00000541108 DNAH5Q8TE73 4624 aa11.1□□□□□ -0.63
CLIP1-215ENST00000541108 LINC00528Q8N1L1 170 aa11.08□□□□□ -0.64
CLIP1-215ENST00000541108 FAM30AQ9NZY2 134 aa11.08□□□□□ -0.64
CLIP1-215ENST00000541108 ETDCA0A1B0GVM5 59 aa11.08□□□□□ -0.64
CLIP1-215ENST00000541108 SLC25A20O43772 301 aa11.08□□□□□ -0.64
CLIP1-215ENST00000541108 DNAL4O96015 105 aa11.08□□□□□ -0.64
CLIP1-215ENST00000541108 hADV29S1A0JD25 119 aa11.07□□□□□ -0.64
CLIP1-215ENST00000541108 C9JAW5 83 aa11.07□□□□□ -0.64
CLIP1-215ENST00000541108 INAFM2P0DMQ5 153 aa11.07□□□□□ -0.64
CLIP1-215ENST00000541108 Q6ZRX8 168 aa11.07□□□□□ -0.64
CLIP1-215ENST00000541108 PRO0461Q9UI25 63 aa11.07□□□□□ -0.64
CLIP1-215ENST00000541108 B5MCH6 92 aa11.06□□□□□ -0.64
CLIP1-215ENST00000541108 KRTAP11-1Q8IUC1 163 aa11.04□□□□□ -0.64
CLIP1-215ENST00000541108 CIRBP-AS1Q8TBR5 109 aa11.04□□□□□ -0.64
CLIP1-215ENST00000541108 LINC01600Q96MT4 127 aa11.04□□□□□ -0.64
CLIP1-215ENST00000541108 DHRS4-AS1Q9P1J3 65 aa11.03□□□□□ -0.64
CLIP1-215ENST00000541108 H3BT86 120 aa11.02□□□□□ -0.64
CLIP1-215ENST00000541108 SCXQ7RTU7 201 aa11.02□□□□□ -0.64
CLIP1-215ENST00000541108 MTURNQ8N3F0 131 aa11.02□□□□□ -0.64
CLIP1-215ENST00000541108 H0Y9J4 135 aa11.01□□□□□ -0.65
CLIP1-215ENST00000541108 ANKRD29Q8N6D5 301 aa11.01□□□□□ -0.65
CLIP1-215ENST00000541108 SMCPP49901 116 aaPredicted RBP11.01□□□□□ -0.65
CLIP1-215ENST00000541108 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11□□□□□ -0.65
CLIP1-215ENST00000541108 FAM19A1Q7Z5A9 133 aa11□□□□□ -0.65
CLIP1-215ENST00000541108 ORMDL1Q9P0S3 153 aa11□□□□□ -0.65
CLIP1-215ENST00000541108 DNAH8Q96JB1 4490 aa10.99□□□□□ -0.65
CLIP1-215ENST00000541108 BCE1O60756 84 aa10.98□□□□□ -0.65
CLIP1-215ENST00000541108 GHRHP01286 108 aa10.98□□□□□ -0.65
CLIP1-215ENST00000541108 BAALC-AS2P0C853 105 aa10.98□□□□□ -0.65
CLIP1-215ENST00000541108 OCIAD2Q56VL3 154 aa10.98□□□□□ -0.65
CLIP1-215ENST00000541108 Q9BRP9 147 aa10.98□□□□□ -0.65
CLIP1-215ENST00000541108 H3BQ85 93 aa10.98□□□□□ -0.65
CLIP1-215ENST00000541108 Q6ZQY7 126 aa10.97□□□□□ -0.65
CLIP1-215ENST00000541108 PSORS1C2Q9UIG4 136 aa10.96□□□□□ -0.65
CLIP1-215ENST00000541108 PKHD1P08F94 4074 aa10.96□□□□□ -0.66
CLIP1-215ENST00000541108 TMEM256-PLSCR3K7ERE1 68 aa10.95□□□□□ -0.66
CLIP1-215ENST00000541108 PRLHP81277 87 aa10.95□□□□□ -0.66
CLIP1-215ENST00000541108 RYR3Q15413 4870 aa10.94□□□□□ -0.66
CLIP1-215ENST00000541108 UBE2AP49459 152 aa10.94□□□□□ -0.66
CLIP1-215ENST00000541108 SMCR5Q8TEV8 140 aa10.94□□□□□ -0.66
CLIP1-215ENST00000541108 KRTAP13-1Q8IUC0 172 aa10.93□□□□□ -0.66
CLIP1-215ENST00000541108 ETDBQ3ZM63 59 aa10.92□□□□□ -0.66
CLIP1-215ENST00000541108 TEN1Q86WV5 123 aa10.92□□□□□ -0.66
CLIP1-215ENST00000541108 C1orf137Q5JT78 98 aa10.91□□□□□ -0.66
CLIP1-215ENST00000541108 PPDPFLQ8WWR9 84 aa10.9□□□□□ -0.66
CLIP1-215ENST00000541108 HIGD2AQ9BW72 106 aa10.9□□□□□ -0.66
CLIP1-215ENST00000541108 ERC2-IT1O76042 136 aa10.89□□□□□ -0.67
CLIP1-215ENST00000541108 LRP1BQ9NZR2 4599 aa10.89□□□□□ -0.67
CLIP1-215ENST00000541108 IGLV5-48A0A075B6I7 105 aa10.88□□□□□ -0.67
CLIP1-215ENST00000541108 HAMPP81172 84 aa10.88□□□□□ -0.67
CLIP1-215ENST00000541108 XGP55808 180 aa10.87□□□□□ -0.67
CLIP1-215ENST00000541108 ZNF861PO60384 105 aa10.86□□□□□ -0.67
CLIP1-215ENST00000541108 LINC01547P58512 204 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-215ENST00000541108 IGLV7-43P04211 117 aa10.85□□□□□ -0.67
CLIP1-215ENST00000541108 DYNC1H1Q14204 4646 aaKnown RBP10.84□□□□□ -0.67
CLIP1-215ENST00000541108 Q8N377 158 aa10.84□□□□□ -0.67
CLIP1-215ENST00000541108 ST20-AS1Q8NBB2 130 aa10.84□□□□□ -0.67
CLIP1-215ENST00000541108 TEX49A0A1B0GTD5 131 aa10.83□□□□□ -0.68
CLIP1-215ENST00000541108 JMJD7-PLA2G4BH0Y9G9 81 aa10.83□□□□□ -0.68
CLIP1-215ENST00000541108 OBSCN-AS1Q96MR7 158 aa10.83□□□□□ -0.68
CLIP1-215ENST00000541108 DEFB105AQ8NG35 78 aa10.82□□□□□ -0.68
CLIP1-215ENST00000541108 LAMTOR3Q9UHA4 124 aa10.81□□□□□ -0.68
CLIP1-215ENST00000541108 NDUFV3P56181 108 aaKnown RBP10.8□□□□□ -0.68
CLIP1-215ENST00000541108 SPRR1BP22528 89 aa10.79□□□□□ -0.68
CLIP1-215ENST00000541108 ZNF706Q9Y5V0 76 aaPredicted RBP10.77□□□□□ -0.69
CLIP1-215ENST00000541108 RBM3P98179 157 aaKnown RBP10.76□□□□□ -0.69
CLIP1-215ENST00000541108 J3QR89 54 aa10.76□□□□□ -0.69
CLIP1-215ENST00000541108 GAGE2AQ6NT46 116 aa10.75□□□□□ -0.69
CLIP1-215ENST00000541108 CDK2AP2O75956 126 aa10.74□□□□□ -0.69
CLIP1-215ENST00000541108 SMIM29Q86T20 159 aa10.74□□□□□ -0.69
CLIP1-215ENST00000541108 SPRR4Q96PI1 79 aa10.74□□□□□ -0.69
CLIP1-215ENST00000541108 SRRM2Q9UQ35 2752 aaKnown RBP10.73□□□□□ -0.69
CLIP1-215ENST00000541108 K7ERU9 68 aa10.73□□□□□ -0.69
CLIP1-215ENST00000541108 RPL37AP61513 92 aaKnown RBP10.73□□□□□ -0.69
CLIP1-215ENST00000541108 APOBP04114 4563 aaKnown RBP10.73□□□□□ -0.69
CLIP1-215ENST00000541108 C14orf132Q9NPU4 83 aa10.73□□□□□ -0.69
CLIP1-215ENST00000541108 LINC00483Q53H64 154 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms