RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 KCNQ1DNQ9H478 68 aa8.05□□□□□ -1.12
NPC1-202ENST00000540608 SNURFQ9Y675 71 aa8.05□□□□□ -1.12
NPC1-202ENST00000540608 SYCNQ0VAF6 134 aa8.05□□□□□ -1.12
NPC1-202ENST00000540608 RMI2Q96E14 147 aa8.05□□□□□ -1.12
NPC1-202ENST00000540608 TENM3Q9P273 2699 aa8.05□□□□□ -1.12
NPC1-202ENST00000540608 EPM2AB3EWF7 344 aa8.05□□□□□ -1.12
NPC1-202ENST00000540608 LINC01556Q5JQF7 62 aa8.05□□□□□ -1.12
NPC1-202ENST00000540608 IGKV2D-24A0A075B6R9 120 aa8.04□□□□□ -1.12
NPC1-202ENST00000540608 SERP1Q9Y6X1 66 aa8.04□□□□□ -1.12
NPC1-202ENST00000540608 C4orf26Q17RF5 130 aa8.03□□□□□ -1.12
NPC1-202ENST00000540608 BPY2O14599 106 aa8.03□□□□□ -1.12
NPC1-202ENST00000540608 NREPQ16612 68 aa8.03□□□□□ -1.12
NPC1-202ENST00000540608 NKAPP1Q8N9T2 125 aa8.03□□□□□ -1.12
NPC1-202ENST00000540608 NDUFC1O43677 76 aa8.02□□□□□ -1.13
NPC1-202ENST00000540608 FBN1P35555 2871 aaKnown RBP8.02□□□□□ -1.13
NPC1-202ENST00000540608 SERTAD4-AS1Q5TG53 156 aa8.02□□□□□ -1.13
NPC1-202ENST00000540608 Q8N377 158 aa8.02□□□□□ -1.13
NPC1-202ENST00000540608 F8WEM9 126 aa8.01□□□□□ -1.13
NPC1-202ENST00000540608 C7orf33Q8WU49 177 aa8.01□□□□□ -1.13
NPC1-202ENST00000540608 IGKV4-1P06312 121 aa8.01□□□□□ -1.13
NPC1-202ENST00000540608 ERC2-IT1O76042 136 aa8□□□□□ -1.13
NPC1-202ENST00000540608 DEFB105AQ8NG35 78 aa8□□□□□ -1.13
NPC1-202ENST00000540608 FLNBO75369 2602 aaKnown RBP8□□□□□ -1.13
NPC1-202ENST00000540608 IGLV5-48A0A075B6I7 105 aa8□□□□□ -1.13
NPC1-202ENST00000540608 Q8N9L7 120 aa8□□□□□ -1.13
NPC1-202ENST00000540608 CMYA5Q8N3K9 4069 aa7.99□□□□□ -1.13
NPC1-202ENST00000540608 F8P00451 2351 aa7.99□□□□□ -1.13
NPC1-202ENST00000540608 DEFB131BA0A096LNP1 70 aa7.99□□□□□ -1.13
NPC1-202ENST00000540608 TLX1NBP0CAT3 122 aa7.99□□□□□ -1.13
NPC1-202ENST00000540608 PLA2G2DQ9UNK4 145 aa7.99□□□□□ -1.13
NPC1-202ENST00000540608 STAB1Q9NY15 2570 aa7.99□□□□□ -1.13
NPC1-202ENST00000540608 DHRS4-AS1Q9P1J3 65 aa7.98□□□□□ -1.13
NPC1-202ENST00000540608 C3orf84H3BNL1 204 aa7.98□□□□□ -1.13
NPC1-202ENST00000540608 DNAH10OSP0CZ25 163 aa7.98□□□□□ -1.13
NPC1-202ENST00000540608 KRTAP24-1Q3LI83 254 aa7.98□□□□□ -1.13
NPC1-202ENST00000540608 HRCT1Q6UXD1 115 aa7.98□□□□□ -1.13
NPC1-202ENST00000540608 TMEM254Q8TBM7 123 aa7.97□□□□□ -1.13
NPC1-202ENST00000540608 A0A1B0GW54 56 aa7.97□□□□□ -1.13
NPC1-202ENST00000540608 Q6ZRX8 168 aa7.96□□□□□ -1.13
NPC1-202ENST00000540608 C11orf45Q8TAV5 145 aa7.96□□□□□ -1.13
NPC1-202ENST00000540608 KRTAP4-16G5E9R7 235 aaPredicted RBP7.96□□□□□ -1.14
NPC1-202ENST00000540608 OCR1Q9BZK8 76 aa7.96□□□□□ -1.14
NPC1-202ENST00000540608 ATP5EP56381 51 aaPredicted RBP7.95□□□□□ -1.14
NPC1-202ENST00000540608 IGLV5-37A0A075B6J1 123 aa7.95□□□□□ -1.14
NPC1-202ENST00000540608 PRYO14603 147 aa7.95□□□□□ -1.14
NPC1-202ENST00000540608 IGLV1-50A0A075B6I6 118 aa7.94□□□□□ -1.14
NPC1-202ENST00000540608 RPL37AP8A6NKH3 93 aa7.94□□□□□ -1.14
NPC1-202ENST00000540608 SPRR1AP35321 89 aa7.94□□□□□ -1.14
NPC1-202ENST00000540608 Q9BRP9 147 aa7.94□□□□□ -1.14
NPC1-202ENST00000540608 FUSP35637 526 aaKnown RBP eCLIP7.94□□□□□ -1.14
NPC1-202ENST00000540608 A0A1W2PNM2 257 aa7.93□□□□□ -1.14
NPC1-202ENST00000540608 MRAPQ8TCY5 172 aa7.93□□□□□ -1.14
NPC1-202ENST00000540608 SMIM26A0A096LP01 95 aa7.93□□□□□ -1.14
NPC1-202ENST00000540608 FAM168BA1KXE4 195 aa7.93□□□□□ -1.14
NPC1-202ENST00000540608 TNP2Q05952 138 aa7.93□□□□□ -1.14
NPC1-202ENST00000540608 A0A0U1RQV1 116 aa7.92□□□□□ -1.14
NPC1-202ENST00000540608 ETDCA0A1B0GVM5 59 aa7.92□□□□□ -1.14
NPC1-202ENST00000540608 DNAH3Q8TD57 4116 aa7.92□□□□□ -1.14
NPC1-202ENST00000540608 NOTCH1P46531 2555 aa7.91□□□□□ -1.14
NPC1-202ENST00000540608 C1orf137Q5JT78 98 aa7.91□□□□□ -1.14
NPC1-202ENST00000540608 MAST4O15021 2626 aa7.91□□□□□ -1.14
NPC1-202ENST00000540608 KRTAP7-1Q8IUC3 87 aa7.91□□□□□ -1.14
NPC1-202ENST00000540608 ST20-AS1Q8NBB2 130 aa7.91□□□□□ -1.14
NPC1-202ENST00000540608 CASC10Q5T4H9 136 aa7.89□□□□□ -1.15
NPC1-202ENST00000540608 Q8NBF4 154 aa7.89□□□□□ -1.15
NPC1-202ENST00000540608 FP248Q71RG6 208 aaPredicted RBP7.89□□□□□ -1.15
NPC1-202ENST00000540608 SPRR4Q96PI1 79 aa7.89□□□□□ -1.15
NPC1-202ENST00000540608 LINC00588Q9Y4M8 146 aa7.89□□□□□ -1.15
NPC1-202ENST00000540608 DNAH1Q9P2D7 4330 aa7.88□□□□□ -1.15
NPC1-202ENST00000540608 MRPL55Q7Z7F7 128 aaKnown RBP7.88□□□□□ -1.15
NPC1-202ENST00000540608 PRB2P02812 416 aaPredicted RBP7.88□□□□□ -1.15
NPC1-202ENST00000540608 SMIM29Q86T20 159 aa7.86□□□□□ -1.15
NPC1-202ENST00000540608 HIGD2AQ9BW72 106 aa7.86□□□□□ -1.15
NPC1-202ENST00000540608 UBE2BP63146 152 aa7.85□□□□□ -1.15
NPC1-202ENST00000540608 FAM30AQ9NZY2 134 aa7.85□□□□□ -1.15
NPC1-202ENST00000540608 DSCR10P59022 87 aa7.84□□□□□ -1.15
NPC1-202ENST00000540608 NBEAL1Q6ZS30 2694 aa7.84□□□□□ -1.15
NPC1-202ENST00000540608 LCE6AA0A183 80 aa7.84□□□□□ -1.15
NPC1-202ENST00000540608 LINC00474Q9P2X8 69 aa7.84□□□□□ -1.15
NPC1-202ENST00000540608 REG3GQ6UW15 175 aa7.83□□□□□ -1.16
NPC1-202ENST00000540608 LINC00336Q6ZUF6 198 aa7.81□□□□□ -1.16
NPC1-202ENST00000540608 COL6A5A8TX70 2615 aa7.8□□□□□ -1.16
NPC1-202ENST00000540608 HUWE1Q7Z6Z7 4374 aaKnown RBP7.8□□□□□ -1.16
NPC1-202ENST00000540608 K7EQZ3 153 aa7.8□□□□□ -1.16
NPC1-202ENST00000540608 LINC00476Q8WZB0 136 aa7.8□□□□□ -1.16
NPC1-202ENST00000540608 FAM229BQ4G0N7 80 aa7.79□□□□□ -1.16
NPC1-202ENST00000540608 K7EIL1 84 aa7.77□□□□□ -1.16
NPC1-202ENST00000540608 PRO0628Q9UI54 55 aa7.77□□□□□ -1.16
NPC1-202ENST00000540608 ZCCHC13Q8WW36 166 aaKnown RBP7.77□□□□□ -1.17
NPC1-202ENST00000540608 IGFL1Q6UW32 110 aa7.76□□□□□ -1.17
NPC1-202ENST00000540608 HCG22E2RYF7 251 aa7.76□□□□□ -1.17
NPC1-202ENST00000540608 LYSTQ99698 3801 aa7.75□□□□□ -1.17
NPC1-202ENST00000540608 IGLV8-61A0A075B6I0 122 aa7.75□□□□□ -1.17
NPC1-202ENST00000540608 PSCAO43653 123 aa7.75□□□□□ -1.17
NPC1-202ENST00000540608 A0A0G2JQZ4 141 aa7.74□□□□□ -1.17
NPC1-202ENST00000540608 A0A1W2PNN7 141 aa7.74□□□□□ -1.17
NPC1-202ENST00000540608 C16orf90A8MZG2 172 aa7.74□□□□□ -1.17
NPC1-202ENST00000540608 A0A096LNI7 61 aa7.73□□□□□ -1.17
NPC1-202ENST00000540608 MDFIQ99750 246 aa7.73□□□□□ -1.17
NPC1-202ENST00000540608 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms