RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 C9orf92A6NGG3 77 aa7.76□□□□□ -1.17
SEMA4D-222ENST00000540183 LINC00310P59036 64 aa7.75□□□□□ -1.17
SEMA4D-222ENST00000540183 MIEN1Q9BRT3 115 aa7.75□□□□□ -1.17
SEMA4D-222ENST00000540183 IGLV8-61A0A075B6I0 122 aa7.74□□□□□ -1.17
SEMA4D-222ENST00000540183 ZNF73O43830 326 aaPredicted RBP7.74□□□□□ -1.17
SEMA4D-222ENST00000540183 SNAPINO95295 136 aa7.74□□□□□ -1.17
SEMA4D-222ENST00000540183 NDUFC2O95298 119 aa7.74□□□□□ -1.17
SEMA4D-222ENST00000540183 JOSD1Q15040 202 aaPredicted RBP7.74□□□□□ -1.17
SEMA4D-222ENST00000540183 ADAMTSL4-AS1Q5T5F5 129 aa7.74□□□□□ -1.17
SEMA4D-222ENST00000540183 LGALS3P17931 250 aaKnown RBP7.73□□□□□ -1.17
SEMA4D-222ENST00000540183 SERF1AO75920 110 aa7.72□□□□□ -1.17
SEMA4D-222ENST00000540183 LEPROTL1O95214 131 aa7.72□□□□□ -1.17
SEMA4D-222ENST00000540183 SVBPQ8N300 66 aa7.72□□□□□ -1.17
SEMA4D-222ENST00000540183 DPM2O94777 84 aa7.71□□□□□ -1.18
SEMA4D-222ENST00000540183 FABP4P15090 132 aa7.71□□□□□ -1.18
SEMA4D-222ENST00000540183 PLNP26678 52 aa7.71□□□□□ -1.18
SEMA4D-222ENST00000540183 A0A0J9YXY3 114 aa7.7□□□□□ -1.18
SEMA4D-222ENST00000540183 NMUP48645 174 aa7.7□□□□□ -1.18
SEMA4D-222ENST00000540183 HERVK_113P61574 105 aa7.7□□□□□ -1.18
SEMA4D-222ENST00000540183 IGKCP01834 107 aa7.69□□□□□ -1.18
SEMA4D-222ENST00000540183 TRGC2P03986 189 aa7.69□□□□□ -1.18
SEMA4D-222ENST00000540183 SPRR1BP22528 89 aa7.69□□□□□ -1.18
SEMA4D-222ENST00000540183 NDUFA5Q16718 116 aa7.69□□□□□ -1.18
SEMA4D-222ENST00000540183 FLGP20930 4061 aaPredicted RBP7.69□□□□□ -1.18
SEMA4D-222ENST00000540183 LORP23490 312 aaPredicted RBP7.68□□□□□ -1.18
SEMA4D-222ENST00000540183 KRTAP10-6P60371 365 aaPredicted RBP7.67□□□□□ -1.18
SEMA4D-222ENST00000540183 LIMD2Q9BT23 127 aa7.67□□□□□ -1.18
SEMA4D-222ENST00000540183 OR13C6PQ8NH95 151 aa7.66□□□□□ -1.18
SEMA4D-222ENST00000540183 C5orf52A6NGY3 159 aa7.65□□□□□ -1.18
SEMA4D-222ENST00000540183 H7C2G1 150 aa7.65□□□□□ -1.18
SEMA4D-222ENST00000540183 CFC1BP0CG36 223 aa7.65□□□□□ -1.18
SEMA4D-222ENST00000540183 Q1RN00 199 aa7.65□□□□□ -1.18
SEMA4D-222ENST00000540183 LITAFQ99732 161 aa7.65□□□□□ -1.18
SEMA4D-222ENST00000540183 HINT1P49773 126 aaPredicted RBP7.64□□□□□ -1.19
SEMA4D-222ENST00000540183 LINC00308Q8TCZ7 52 aa7.64□□□□□ -1.19
SEMA4D-222ENST00000540183 LAMTOR3Q9UHA4 124 aa7.64□□□□□ -1.19
SEMA4D-222ENST00000540183 HSPB8Q9UJY1 196 aa7.64□□□□□ -1.19
SEMA4D-222ENST00000540183 A0A0G2JQZ4 141 aa7.63□□□□□ -1.19
SEMA4D-222ENST00000540183 E9PLD3 99 aa7.63□□□□□ -1.19
SEMA4D-222ENST00000540183 DEFB105AQ8NG35 78 aa7.63□□□□□ -1.19
SEMA4D-222ENST00000540183 SPANXCQ9NY87 97 aa7.62□□□□□ -1.19
SEMA4D-222ENST00000540183 DHRS4-AS1Q9P1J3 65 aa7.62□□□□□ -1.19
SEMA4D-222ENST00000540183 SLC25A34Q6PIV7 304 aa7.61□□□□□ -1.19
SEMA4D-222ENST00000540183 COX7BP24311 80 aa7.6□□□□□ -1.19
SEMA4D-222ENST00000540183 ELOF1P60002 83 aaKnown RBP7.6□□□□□ -1.19
SEMA4D-222ENST00000540183 TAL2Q16559 108 aa7.6□□□□□ -1.19
SEMA4D-222ENST00000540183 C6orf99Q4VX62 202 aa7.6□□□□□ -1.19
SEMA4D-222ENST00000540183 TTTY13Q9BZ97 58 aa7.6□□□□□ -1.19
SEMA4D-222ENST00000540183 C1orf195Q5TG92 126 aa7.59□□□□□ -1.19
SEMA4D-222ENST00000540183 CBY1Q9Y3M2 126 aa7.59□□□□□ -1.19
SEMA4D-222ENST00000540183 M0R2T5 61 aa7.58□□□□□ -1.2
SEMA4D-222ENST00000540183 CD164Q04900 197 aa7.58□□□□□ -1.2
SEMA4D-222ENST00000540183 SMIM29Q86T20 159 aa7.58□□□□□ -1.2
SEMA4D-222ENST00000540183 SPANXDQ9BXN6 97 aa7.58□□□□□ -1.2
SEMA4D-222ENST00000540183 PRO1933Q9H354 126 aa7.58□□□□□ -1.2
SEMA4D-222ENST00000540183 RPL37P61927 97 aaKnown RBP7.57□□□□□ -1.2
SEMA4D-222ENST00000540183 TIMM17BO60830 172 aa7.56□□□□□ -1.2
SEMA4D-222ENST00000540183 TEX49A0A1B0GTD5 131 aa7.55□□□□□ -1.2
SEMA4D-222ENST00000540183 ZNF815PA8K554 130 aa7.54□□□□□ -1.2
SEMA4D-222ENST00000540183 SYS1-DBNDD2H3BUS1 97 aa7.54□□□□□ -1.2
SEMA4D-222ENST00000540183 Q5XG85 94 aa7.54□□□□□ -1.2
SEMA4D-222ENST00000540183 COX6B2Q6YFQ2 88 aa7.54□□□□□ -1.2
SEMA4D-222ENST00000540183 AKR1D1P51857 326 aa7.53□□□□□ -1.2
SEMA4D-222ENST00000540183 COLCA2A8K830 154 aa7.52□□□□□ -1.21
SEMA4D-222ENST00000540183 IGLV5-48A0A075B6I7 105 aa7.5□□□□□ -1.21
SEMA4D-222ENST00000540183 LINC01545Q5VT33 79 aa7.5□□□□□ -1.21
SEMA4D-222ENST00000540183 LINC00518Q8N0U6 118 aa7.5□□□□□ -1.21
SEMA4D-222ENST00000540183 TRBV7-6A0A0J9YX20 115 aa7.48□□□□□ -1.21
SEMA4D-222ENST00000540183 A0A1B0GWB2 263 aa7.47□□□□□ -1.21
SEMA4D-222ENST00000540183 A6NDN8 102 aa7.46□□□□□ -1.22
SEMA4D-222ENST00000540183 HIST1H2BKO60814 126 aa7.45□□□□□ -1.22
SEMA4D-222ENST00000540183 HIST1H2BJP06899 126 aa7.45□□□□□ -1.22
SEMA4D-222ENST00000540183 HIST1H2BOP23527 126 aa7.45□□□□□ -1.22
SEMA4D-222ENST00000540183 HIST1H2BBP33778 126 aa7.45□□□□□ -1.22
SEMA4D-222ENST00000540183 HIST1H2BDP58876 126 aa7.45□□□□□ -1.22
SEMA4D-222ENST00000540183 HIST1H2BCP62807 126 aa7.45□□□□□ -1.22
SEMA4D-222ENST00000540183 HIST2H2BEQ16778 126 aa7.45□□□□□ -1.22
SEMA4D-222ENST00000540183 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.45□□□□□ -1.22
SEMA4D-222ENST00000540183 PET117Q6UWS5 81 aa7.45□□□□□ -1.22
SEMA4D-222ENST00000540183 HIST1H2BHQ93079 126 aa7.45□□□□□ -1.22
SEMA4D-222ENST00000540183 HIST1H2BNQ99877 126 aa7.45□□□□□ -1.22
SEMA4D-222ENST00000540183 HIST1H2BMQ99879 126 aa7.45□□□□□ -1.22
SEMA4D-222ENST00000540183 C3orf79P0CE67 100 aa7.44□□□□□ -1.22
SEMA4D-222ENST00000540183 SLC7A5P1Q8MH63 180 aa7.44□□□□□ -1.22
SEMA4D-222ENST00000540183 ANKRD39Q53RE8 183 aa7.43□□□□□ -1.22
SEMA4D-222ENST00000540183 Q6Q795 121 aa7.43□□□□□ -1.22
SEMA4D-222ENST00000540183 SCGB1D4Q6XE38 83 aa7.43□□□□□ -1.22
SEMA4D-222ENST00000540183 MUSTN1Q8IVN3 82 aa7.43□□□□□ -1.22
SEMA4D-222ENST00000540183 TCL1BO95988 128 aa7.42□□□□□ -1.22
SEMA4D-222ENST00000540183 SMIM11BQ8TCY0 68 aa7.42□□□□□ -1.22
SEMA4D-222ENST00000540183 SSPOA2VEC9 5147 aa7.42□□□□□ -1.22
SEMA4D-222ENST00000540183 USH2AO75445 5202 aa7.41□□□□□ -1.22
SEMA4D-222ENST00000540183 PCP2Q8IVA1 136 aa7.4□□□□□ -1.22
SEMA4D-222ENST00000540183 IFITM1P13164 125 aa7.39□□□□□ -1.23
SEMA4D-222ENST00000540183 KRTDAPP60985 99 aa7.39□□□□□ -1.23
SEMA4D-222ENST00000540183 ATOH7Q8N100 152 aa7.39□□□□□ -1.23
SEMA4D-222ENST00000540183 OBSCN-AS1Q96MR7 158 aa7.38□□□□□ -1.23
SEMA4D-222ENST00000540183 A4D1N5 150 aa7.37□□□□□ -1.23
SEMA4D-222ENST00000540183 F8WEM9 126 aa7.36□□□□□ -1.23
SEMA4D-222ENST00000540183 IGFL1Q6UW32 110 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms