RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.2□□□□□ -0.94
UBE3B-210ENST00000539599 SERP2Q8N6R1 65 aa9.19□□□□□ -0.94
UBE3B-210ENST00000539599 M0R378 163 aa9.19□□□□□ -0.94
UBE3B-210ENST00000539599 SYCNQ0VAF6 134 aa9.19□□□□□ -0.94
UBE3B-210ENST00000539599 LOC110117498A0A087WWA1 95 aa9.18□□□□□ -0.94
UBE3B-210ENST00000539599 LINC01556Q5JQF7 62 aa9.18□□□□□ -0.94
UBE3B-210ENST00000539599 DNAH7Q8WXX0 4024 aa9.18□□□□□ -0.94
UBE3B-210ENST00000539599 H3BNG1 76 aa9.18□□□□□ -0.94
UBE3B-210ENST00000539599 CRYGAP11844 174 aa9.18□□□□□ -0.94
UBE3B-210ENST00000539599 LINC00528Q8N1L1 170 aa9.18□□□□□ -0.94
UBE3B-210ENST00000539599 Q8N9L7 120 aa9.18□□□□□ -0.94
UBE3B-210ENST00000539599 TRAV10A0A0B4J240 114 aa9.17□□□□□ -0.94
UBE3B-210ENST00000539599 LINC00588Q9Y4M8 146 aa9.17□□□□□ -0.94
UBE3B-210ENST00000539599 SRRM2Q9UQ35 2752 aaKnown RBP9.16□□□□□ -0.94
UBE3B-210ENST00000539599 C7orf33Q8WU49 177 aa9.16□□□□□ -0.94
UBE3B-210ENST00000539599 TRBV7-4A0A0J9YYF1 115 aa9.14□□□□□ -0.95
UBE3B-210ENST00000539599 C3orf84H3BNL1 204 aa9.14□□□□□ -0.95
UBE3B-210ENST00000539599 NKAPP1Q8N9T2 125 aa9.13□□□□□ -0.95
UBE3B-210ENST00000539599 C20orf197Q8N268 126 aa9.13□□□□□ -0.95
UBE3B-210ENST00000539599 KRTAP7-1Q8IUC3 87 aa9.12□□□□□ -0.95
UBE3B-210ENST00000539599 ATP5EP2Q5VTU8 51 aa9.12□□□□□ -0.95
UBE3B-210ENST00000539599 ST20-AS1Q8NBB2 130 aa9.12□□□□□ -0.95
UBE3B-210ENST00000539599 FAM19A5Q7Z5A7 132 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-210ENST00000539599 DNAH10OSP0CZ25 163 aa9.1□□□□□ -0.95
UBE3B-210ENST00000539599 Q8N377 158 aa9.09□□□□□ -0.95
UBE3B-210ENST00000539599 OXTP01178 125 aa9.08□□□□□ -0.96
UBE3B-210ENST00000539599 Q9BRP9 147 aa9.08□□□□□ -0.96
UBE3B-210ENST00000539599 SNURFQ9Y675 71 aa9.08□□□□□ -0.96
UBE3B-210ENST00000539599 A0A0G2JQZ4 141 aa9.08□□□□□ -0.96
UBE3B-210ENST00000539599 A0A1W2PNN7 141 aa9.08□□□□□ -0.96
UBE3B-210ENST00000539599 BPY2O14599 106 aa9.07□□□□□ -0.96
UBE3B-210ENST00000539599 PLECQ15149 4684 aaKnown RBP9.07□□□□□ -0.96
UBE3B-210ENST00000539599 TRBV7-6A0A0J9YX20 115 aa9.07□□□□□ -0.96
UBE3B-210ENST00000539599 ERC2-IT1O76042 136 aa9.07□□□□□ -0.96
UBE3B-210ENST00000539599 KCNQ1DNQ9H478 68 aa9.07□□□□□ -0.96
UBE3B-210ENST00000539599 K7EIL1 84 aa9.06□□□□□ -0.96
UBE3B-210ENST00000539599 TM2D3Q9BRN9 247 aa9.06□□□□□ -0.96
UBE3B-210ENST00000539599 KRTAP1-5Q9BYS1 174 aa9.04□□□□□ -0.96
UBE3B-210ENST00000539599 RMI2Q96E14 147 aa9.03□□□□□ -0.96
UBE3B-210ENST00000539599 IGKV2-24A0A0C4DH68 120 aa9.03□□□□□ -0.96
UBE3B-210ENST00000539599 PDE6GP18545 87 aa9.03□□□□□ -0.96
UBE3B-210ENST00000539599 DPH3Q96FX2 82 aa9.03□□□□□ -0.96
UBE3B-210ENST00000539599 IGLV1-50A0A075B6I6 118 aa9.01□□□□□ -0.97
UBE3B-210ENST00000539599 Q6ZRX8 168 aa9.01□□□□□ -0.97
UBE3B-210ENST00000539599 CXCL6P80162 114 aa9.01□□□□□ -0.97
UBE3B-210ENST00000539599 ETDCA0A1B0GVM5 59 aa9.01□□□□□ -0.97
UBE3B-210ENST00000539599 KRTAP4-16G5E9R7 235 aaPredicted RBP9.01□□□□□ -0.97
UBE3B-210ENST00000539599 J3KT08 172 aa9□□□□□ -0.97
UBE3B-210ENST00000539599 TMEM258P61165 79 aa9□□□□□ -0.97
UBE3B-210ENST00000539599 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.99□□□□□ -0.97
UBE3B-210ENST00000539599 NREPQ16612 68 aa8.99□□□□□ -0.97
UBE3B-210ENST00000539599 UBE2BP63146 152 aa8.99□□□□□ -0.97
UBE3B-210ENST00000539599 A0A1W2PNM2 257 aa8.98□□□□□ -0.97
UBE3B-210ENST00000539599 SVIPQ8NHG7 77 aa8.98□□□□□ -0.97
UBE3B-210ENST00000539599 MRPL55Q7Z7F7 128 aaKnown RBP8.98□□□□□ -0.97
UBE3B-210ENST00000539599 TRAV7A0A075B6U4 112 aa8.97□□□□□ -0.97
UBE3B-210ENST00000539599 H3BQ85 93 aa8.97□□□□□ -0.97
UBE3B-210ENST00000539599 IGKV4-1P06312 121 aa8.97□□□□□ -0.97
UBE3B-210ENST00000539599 TLX1NBP0CAT3 122 aa8.97□□□□□ -0.97
UBE3B-210ENST00000539599 PRLHP81277 87 aa8.97□□□□□ -0.97
UBE3B-210ENST00000539599 A0A096LNI7 61 aa8.95□□□□□ -0.98
UBE3B-210ENST00000539599 H7BZZ5 65 aa8.95□□□□□ -0.98
UBE3B-210ENST00000539599 CHTF8P0CG12 524 aa8.95□□□□□ -0.98
UBE3B-210ENST00000539599 C1orf137Q5JT78 98 aa8.95□□□□□ -0.98
UBE3B-210ENST00000539599 SPRR1AP35321 89 aa8.94□□□□□ -0.98
UBE3B-210ENST00000539599 IGLV5-48A0A075B6I7 105 aa8.93□□□□□ -0.98
UBE3B-210ENST00000539599 DEFB116Q30KQ4 102 aa8.93□□□□□ -0.98
UBE3B-210ENST00000539599 F8WEM9 126 aa8.93□□□□□ -0.98
UBE3B-210ENST00000539599 KRTAP11-1Q8IUC1 163 aa8.93□□□□□ -0.98
UBE3B-210ENST00000539599 STARD9Q9P2P6 4700 aa8.92□□□□□ -0.98
UBE3B-210ENST00000539599 PRYO14603 147 aa8.92□□□□□ -0.98
UBE3B-210ENST00000539599 DHRS4-AS1Q9P1J3 65 aa8.92□□□□□ -0.98
UBE3B-210ENST00000539599 F8WDY8 70 aa8.91□□□□□ -0.98
UBE3B-210ENST00000539599 PLA2G2DQ9UNK4 145 aa8.91□□□□□ -0.98
UBE3B-210ENST00000539599 TNP2Q05952 138 aa8.91□□□□□ -0.98
UBE3B-210ENST00000539599 REG3GQ6UW15 175 aa8.9□□□□□ -0.98
UBE3B-210ENST00000539599 FAM236DA0A1B0GTK5 79 aa8.9□□□□□ -0.98
UBE3B-210ENST00000539599 FAM236CP0DP71 79 aa8.9□□□□□ -0.98
UBE3B-210ENST00000539599 HIGD2AQ9BW72 106 aa8.9□□□□□ -0.98
UBE3B-210ENST00000539599 IGLV5-37A0A075B6J1 123 aa8.9□□□□□ -0.99
UBE3B-210ENST00000539599 PSCAO43653 123 aa8.9□□□□□ -0.99
UBE3B-210ENST00000539599 FUSP35637 526 aaKnown RBP eCLIP8.9□□□□□ -0.99
UBE3B-210ENST00000539599 C4orf26Q17RF5 130 aa8.89□□□□□ -0.99
UBE3B-210ENST00000539599 SMIM29Q86T20 159 aa8.89□□□□□ -0.99
UBE3B-210ENST00000539599 FAM30AQ9NZY2 134 aa8.89□□□□□ -0.99
UBE3B-210ENST00000539599 KLKP1Q107X0 134 aa8.87□□□□□ -0.99
UBE3B-210ENST00000539599 PHF5AQ7RTV0 110 aaKnown RBP8.87□□□□□ -0.99
UBE3B-210ENST00000539599 UBE2DNLQ8IWF7 75 aa8.87□□□□□ -0.99
UBE3B-210ENST00000539599 LINC00476Q8WZB0 136 aa8.87□□□□□ -0.99
UBE3B-210ENST00000539599 DYNC2H1Q8NCM8 4307 aaKnown RBP8.86□□□□□ -0.99
UBE3B-210ENST00000539599 PRKDCP78527 4128 aaKnown RBP8.86□□□□□ -0.99
UBE3B-210ENST00000539599 RPS28P62857 69 aaKnown RBP8.86□□□□□ -0.99
UBE3B-210ENST00000539599 Q8NBF4 154 aa8.86□□□□□ -0.99
UBE3B-210ENST00000539599 FRAS1Q86XX4 4008 aa8.86□□□□□ -0.99
UBE3B-210ENST00000539599 K7EQZ3 153 aa8.85□□□□□ -0.99
UBE3B-210ENST00000539599 TMEM254Q8TBM7 123 aa8.85□□□□□ -0.99
UBE3B-210ENST00000539599 KMT2AQ03164 3969 aa8.84□□□□□ -0.99
UBE3B-210ENST00000539599 OCR1Q9BZK8 76 aa8.84□□□□□ -0.99
UBE3B-210ENST00000539599 DSCR10P59022 87 aa8.84□□□□□ -1
UBE3B-210ENST00000539599 PANO1I0J062 215 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 188.7 ms