RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 TMEM254Q8TBM7 123 aa8.68□□□□□ -1.02
UBE3B-209ENST00000539584 NBEAL2Q6ZNJ1 2754 aa8.68□□□□□ -1.02
UBE3B-209ENST00000539584 C4orf26Q17RF5 130 aa8.68□□□□□ -1.02
UBE3B-209ENST00000539584 Q6ZTC4 211 aa8.68□□□□□ -1.02
UBE3B-209ENST00000539584 IGLV5-37A0A075B6J1 123 aa8.67□□□□□ -1.02
UBE3B-209ENST00000539584 IGKV2D-24A0A075B6R9 120 aa8.67□□□□□ -1.02
UBE3B-209ENST00000539584 FUSP35637 526 aaKnown RBP eCLIP8.67□□□□□ -1.02
UBE3B-209ENST00000539584 PRYO14603 147 aa8.66□□□□□ -1.02
UBE3B-209ENST00000539584 Q8N377 158 aa8.66□□□□□ -1.02
UBE3B-209ENST00000539584 DNAH10OSP0CZ25 163 aa8.66□□□□□ -1.02
UBE3B-209ENST00000539584 C7orf33Q8WU49 177 aa8.66□□□□□ -1.02
UBE3B-209ENST00000539584 OCR1Q9BZK8 76 aa8.66□□□□□ -1.02
UBE3B-209ENST00000539584 Q6ZRX8 168 aa8.64□□□□□ -1.03
UBE3B-209ENST00000539584 SPRR1AP35321 89 aa8.64□□□□□ -1.03
UBE3B-209ENST00000539584 HRCT1Q6UXD1 115 aa8.64□□□□□ -1.03
UBE3B-209ENST00000539584 KRTAP4-16G5E9R7 235 aaPredicted RBP8.63□□□□□ -1.03
UBE3B-209ENST00000539584 DEFB131BA0A096LNP1 70 aa8.62□□□□□ -1.03
UBE3B-209ENST00000539584 SERTAD4-AS1Q5TG53 156 aa8.62□□□□□ -1.03
UBE3B-209ENST00000539584 TENM4Q6N022 2769 aa8.62□□□□□ -1.03
UBE3B-209ENST00000539584 IGLV1-50A0A075B6I6 118 aa8.61□□□□□ -1.03
UBE3B-209ENST00000539584 A0A0U1RQV1 116 aa8.61□□□□□ -1.03
UBE3B-209ENST00000539584 TNP2Q05952 138 aa8.61□□□□□ -1.03
UBE3B-209ENST00000539584 MRAPQ8TCY5 172 aa8.61□□□□□ -1.03
UBE3B-209ENST00000539584 ETDCA0A1B0GVM5 59 aa8.6□□□□□ -1.03
UBE3B-209ENST00000539584 C3orf84H3BNL1 204 aa8.6□□□□□ -1.03
UBE3B-209ENST00000539584 DEFB105AQ8NG35 78 aa8.6□□□□□ -1.03
UBE3B-209ENST00000539584 C11orf45Q8TAV5 145 aa8.6□□□□□ -1.03
UBE3B-209ENST00000539584 SPRR4Q96PI1 79 aa8.6□□□□□ -1.03
UBE3B-209ENST00000539584 UNC79Q9P2D8 2635 aa8.59□□□□□ -1.03
UBE3B-209ENST00000539584 Q8NBF4 154 aa8.59□□□□□ -1.03
UBE3B-209ENST00000539584 RETNQ9HD89 108 aa8.59□□□□□ -1.03
UBE3B-209ENST00000539584 ITPR2Q14571 2701 aa8.58□□□□□ -1.04
UBE3B-209ENST00000539584 C1orf137Q5JT78 98 aa8.58□□□□□ -1.04
UBE3B-209ENST00000539584 Q8N9L7 120 aa8.58□□□□□ -1.04
UBE3B-209ENST00000539584 NOTCH2Q04721 2471 aa8.58□□□□□ -1.04
UBE3B-209ENST00000539584 Q9BRP9 147 aa8.57□□□□□ -1.04
UBE3B-209ENST00000539584 LCE6AA0A183 80 aa8.56□□□□□ -1.04
UBE3B-209ENST00000539584 A0A1W2PNM2 257 aa8.56□□□□□ -1.04
UBE3B-209ENST00000539584 KRTAP10-11P60412 298 aa8.56□□□□□ -1.04
UBE3B-209ENST00000539584 VWFP04275 2813 aa8.56□□□□□ -1.04
UBE3B-209ENST00000539584 OXLD1Q5BKU9 147 aa8.56□□□□□ -1.04
UBE3B-209ENST00000539584 FP248Q71RG6 208 aaPredicted RBP8.55□□□□□ -1.04
UBE3B-209ENST00000539584 MRPL55Q7Z7F7 128 aaKnown RBP8.54□□□□□ -1.04
UBE3B-209ENST00000539584 PRO0628Q9UI54 55 aa8.53□□□□□ -1.04
UBE3B-209ENST00000539584 RPL37AP8A6NKH3 93 aa8.52□□□□□ -1.05
UBE3B-209ENST00000539584 SMIM29Q86T20 159 aa8.51□□□□□ -1.05
UBE3B-209ENST00000539584 FASNP49327 2511 aaKnown RBP8.5□□□□□ -1.05
UBE3B-209ENST00000539584 REG3GQ6UW15 175 aa8.49□□□□□ -1.05
UBE3B-209ENST00000539584 HIGD2AQ9BW72 106 aa8.49□□□□□ -1.05
UBE3B-209ENST00000539584 UBE2BP63146 152 aa8.49□□□□□ -1.05
UBE3B-209ENST00000539584 ST20-AS1Q8NBB2 130 aa8.49□□□□□ -1.05
UBE3B-209ENST00000539584 LINC00588Q9Y4M8 146 aa8.49□□□□□ -1.05
UBE3B-209ENST00000539584 FAM168BA1KXE4 195 aa8.48□□□□□ -1.05
UBE3B-209ENST00000539584 DSCR10P59022 87 aa8.48□□□□□ -1.05
UBE3B-209ENST00000539584 HIVEP1P15822 2718 aa8.48□□□□□ -1.05
UBE3B-209ENST00000539584 KRTAP7-1Q8IUC3 87 aa8.47□□□□□ -1.05
UBE3B-209ENST00000539584 LINC00336Q6ZUF6 198 aa8.47□□□□□ -1.05
UBE3B-209ENST00000539584 NSD1Q96L73 2696 aaPredicted RBP8.47□□□□□ -1.05
UBE3B-209ENST00000539584 FAM30AQ9NZY2 134 aa8.46□□□□□ -1.05
UBE3B-209ENST00000539584 IGLV8-61A0A075B6I0 122 aa8.46□□□□□ -1.06
UBE3B-209ENST00000539584 ZCCHC13Q8WW36 166 aaKnown RBP8.46□□□□□ -1.06
UBE3B-209ENST00000539584 TEP1Q99973 2627 aaKnown RBP8.44□□□□□ -1.06
UBE3B-209ENST00000539584 HCG22E2RYF7 251 aa8.44□□□□□ -1.06
UBE3B-209ENST00000539584 LINC00476Q8WZB0 136 aa8.44□□□□□ -1.06
UBE3B-209ENST00000539584 LINC00474Q9P2X8 69 aa8.44□□□□□ -1.06
UBE3B-209ENST00000539584 HELZ2Q9BYK8 2649 aaKnown RBP8.44□□□□□ -1.06
UBE3B-209ENST00000539584 NDUFB1O75438 58 aa8.44□□□□□ -1.06
UBE3B-209ENST00000539584 TENM1Q9UKZ4 2725 aa8.43□□□□□ -1.06
UBE3B-209ENST00000539584 KMT2BQ9UMN6 2715 aaPredicted RBP8.43□□□□□ -1.06
UBE3B-209ENST00000539584 K7EQZ3 153 aa8.43□□□□□ -1.06
UBE3B-209ENST00000539584 CASC10Q5T4H9 136 aa8.42□□□□□ -1.06
UBE3B-209ENST00000539584 TRRAPQ9Y4A5 3859 aa8.42□□□□□ -1.06
UBE3B-209ENST00000539584 ATRQ13535 2644 aa8.41□□□□□ -1.06
UBE3B-209ENST00000539584 C16orf90A8MZG2 172 aa8.41□□□□□ -1.06
UBE3B-209ENST00000539584 hDV103S1A0JD37 113 aa8.4□□□□□ -1.06
UBE3B-209ENST00000539584 PSCAO43653 123 aa8.4□□□□□ -1.06
UBE3B-209ENST00000539584 CNBPP62633 177 aaKnown RBP8.4□□□□□ -1.06
UBE3B-209ENST00000539584 IGFL1Q6UW32 110 aa8.4□□□□□ -1.06
UBE3B-209ENST00000539584 OTOGQ6ZRI0 2925 aa8.4□□□□□ -1.07
UBE3B-209ENST00000539584 CYP4F30PQ9H0H9 118 aa8.39□□□□□ -1.07
UBE3B-209ENST00000539584 FAM229BQ4G0N7 80 aa8.39□□□□□ -1.07
UBE3B-209ENST00000539584 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.37□□□□□ -1.07
UBE3B-209ENST00000539584 H0Y9J4 135 aa8.37□□□□□ -1.07
UBE3B-209ENST00000539584 H3BPC8 53 aa8.36□□□□□ -1.07
UBE3B-209ENST00000539584 MP68P56378 58 aa8.36□□□□□ -1.07
UBE3B-209ENST00000539584 SPRR1BP22528 89 aa8.36□□□□□ -1.07
UBE3B-209ENST00000539584 PKIGQ9Y2B9 76 aa8.36□□□□□ -1.07
UBE3B-209ENST00000539584 Q1T7F1 81 aa8.35□□□□□ -1.07
UBE3B-209ENST00000539584 KRTAP24-1Q3LI83 254 aa8.35□□□□□ -1.07
UBE3B-209ENST00000539584 C14orf177Q52M58 125 aa8.35□□□□□ -1.07
UBE3B-209ENST00000539584 MPLKIPQ8TAP9 179 aa8.35□□□□□ -1.07
UBE3B-209ENST00000539584 C1orf64Q8NEQ6 169 aa8.34□□□□□ -1.07
UBE3B-209ENST00000539584 A0A087WSZ3 146 aa8.33□□□□□ -1.08
UBE3B-209ENST00000539584 A0A096LNI7 61 aa8.33□□□□□ -1.08
UBE3B-209ENST00000539584 UBE2AP49459 152 aa8.32□□□□□ -1.08
UBE3B-209ENST00000539584 BRK1Q8WUW1 75 aa8.32□□□□□ -1.08
UBE3B-209ENST00000539584 PRLHP81277 87 aa8.31□□□□□ -1.08
UBE3B-209ENST00000539584 DNAH1Q9P2D7 4330 aa8.31□□□□□ -1.08
UBE3B-209ENST00000539584 A0A1W2PNN7 141 aa8.3□□□□□ -1.08
UBE3B-209ENST00000539584 KRTAP29-1A8MX34 341 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms