RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 LINC00158P58513 81 aa5.9□□□□□ -1.46
DDB1-213ENST00000539332 TMEM256-PLSCR3K7ERE1 68 aa5.9□□□□□ -1.47
DDB1-213ENST00000539332 CASC10Q5T4H9 136 aa5.9□□□□□ -1.47
DDB1-213ENST00000539332 UBE2DNLQ8IWF7 75 aa5.9□□□□□ -1.47
DDB1-213ENST00000539332 Q75L30 129 aa5.89□□□□□ -1.47
DDB1-213ENST00000539332 TOMM7Q9P0U1 55 aa5.89□□□□□ -1.47
DDB1-213ENST00000539332 DNAH1Q9P2D7 4330 aa5.88□□□□□ -1.47
DDB1-213ENST00000539332 C3orf84H3BNL1 204 aa5.88□□□□□ -1.47
DDB1-213ENST00000539332 H3BQ85 93 aa5.88□□□□□ -1.47
DDB1-213ENST00000539332 UBL5Q9BZL1 73 aa5.88□□□□□ -1.47
DDB1-213ENST00000539332 NCR3O14931 201 aa5.88□□□□□ -1.47
DDB1-213ENST00000539332 VPS13DQ5THJ4 4388 aa5.87□□□□□ -1.47
DDB1-213ENST00000539332 A0A087WVE0 104 aa5.86□□□□□ -1.47
DDB1-213ENST00000539332 FAM236DA0A1B0GTK5 79 aa5.86□□□□□ -1.47
DDB1-213ENST00000539332 FAM236CP0DP71 79 aa5.86□□□□□ -1.47
DDB1-213ENST00000539332 C1orf195Q5TG92 126 aa5.86□□□□□ -1.47
DDB1-213ENST00000539332 DSCR8Q96T75 97 aa5.86□□□□□ -1.47
DDB1-213ENST00000539332 SERP1Q9Y6X1 66 aa5.86□□□□□ -1.47
DDB1-213ENST00000539332 TRAV7A0A075B6U4 112 aa5.85□□□□□ -1.47
DDB1-213ENST00000539332 SPAG11BQ08648 103 aa5.85□□□□□ -1.47
DDB1-213ENST00000539332 CYSTM1Q9H1C7 97 aa5.85□□□□□ -1.47
DDB1-213ENST00000539332 GVQW2A0A096LPI5 108 aaPredicted RBP5.85□□□□□ -1.47
DDB1-213ENST00000539332 PDE6GP18545 87 aa5.85□□□□□ -1.47
DDB1-213ENST00000539332 COX17Q14061 63 aa5.85□□□□□ -1.47
DDB1-213ENST00000539332 C9orf129Q5T035 196 aaKnown RBP5.85□□□□□ -1.47
DDB1-213ENST00000539332 Q8N814 137 aa5.85□□□□□ -1.47
DDB1-213ENST00000539332 C15orf56Q8N910 161 aa5.85□□□□□ -1.47
DDB1-213ENST00000539332 KRTAP1-5Q9BYS1 174 aa5.85□□□□□ -1.47
DDB1-213ENST00000539332 EPM2AB3EWF7 344 aa5.84□□□□□ -1.47
DDB1-213ENST00000539332 Q5XG85 94 aa5.84□□□□□ -1.47
DDB1-213ENST00000539332 LOC110117498A0A087WWA1 95 aa5.83□□□□□ -1.48
DDB1-213ENST00000539332 NDUFC1O43677 76 aa5.83□□□□□ -1.48
DDB1-213ENST00000539332 ATP5EP56381 51 aaPredicted RBP5.83□□□□□ -1.48
DDB1-213ENST00000539332 KMT2AQ03164 3969 aa5.83□□□□□ -1.48
DDB1-213ENST00000539332 NBDYA0A0U1RRE5 68 aa5.83□□□□□ -1.48
DDB1-213ENST00000539332 C10orf25Q5T742 122 aa5.83□□□□□ -1.48
DDB1-213ENST00000539332 C6orf223Q8N319 242 aa5.83□□□□□ -1.48
DDB1-213ENST00000539332 LINC00476Q8WZB0 136 aa5.83□□□□□ -1.48
DDB1-213ENST00000539332 IGKV2D-24A0A075B6R9 120 aa5.82□□□□□ -1.48
DDB1-213ENST00000539332 PFN2P35080 140 aa5.82□□□□□ -1.48
DDB1-213ENST00000539332 UNQ6190/PRO20217Q6UXQ8 127 aa5.82□□□□□ -1.48
DDB1-213ENST00000539332 RMI2Q96E14 147 aa5.82□□□□□ -1.48
DDB1-213ENST00000539332 TRAV23DV6A0A075B6W5 121 aa5.81□□□□□ -1.48
DDB1-213ENST00000539332 LY6G6CO95867 125 aa5.81□□□□□ -1.48
DDB1-213ENST00000539332 SLPIP03973 132 aa5.81□□□□□ -1.48
DDB1-213ENST00000539332 KLKP1Q107X0 134 aa5.81□□□□□ -1.48
DDB1-213ENST00000539332 ALMS1Q8TCU4 4167 aa5.81□□□□□ -1.48
DDB1-213ENST00000539332 CXCL6P80162 114 aa5.8□□□□□ -1.48
DDB1-213ENST00000539332 HRCT1Q6UXD1 115 aa5.8□□□□□ -1.48
DDB1-213ENST00000539332 C20orf197Q8N268 126 aa5.8□□□□□ -1.48
DDB1-213ENST00000539332 C6orf48Q9UBA6 75 aa5.8□□□□□ -1.48
DDB1-213ENST00000539332 RBM3P98179 157 aaKnown RBP5.8□□□□□ -1.48
DDB1-213ENST00000539332 C9orf116Q5BN46 136 aaPredicted RBP5.8□□□□□ -1.48
DDB1-213ENST00000539332 SMIM26A0A096LP01 95 aa5.79□□□□□ -1.48
DDB1-213ENST00000539332 M0R2N4 97 aa5.79□□□□□ -1.48
DDB1-213ENST00000539332 HIGD2BQ4VC39 106 aa5.79□□□□□ -1.48
DDB1-213ENST00000539332 Q6ZR54 194 aa5.79□□□□□ -1.48
DDB1-213ENST00000539332 Q6ZQT0 140 aa5.78□□□□□ -1.48
DDB1-213ENST00000539332 DNAH10Q8IVF4 4471 aa5.78□□□□□ -1.48
DDB1-213ENST00000539332 DNAH6Q9C0G6 4158 aa5.78□□□□□ -1.48
DDB1-213ENST00000539332 H7BZZ5 65 aa5.78□□□□□ -1.48
DDB1-213ENST00000539332 Q6ZRU5 148 aa5.78□□□□□ -1.48
DDB1-213ENST00000539332 CAMK2N2Q96S95 79 aa5.78□□□□□ -1.48
DDB1-213ENST00000539332 FAM229AH3BQW9 127 aa5.77□□□□□ -1.49
DDB1-213ENST00000539332 LINC00575Q6W349 94 aa5.77□□□□□ -1.49
DDB1-213ENST00000539332 ERC2-IT1O76042 136 aa5.76□□□□□ -1.49
DDB1-213ENST00000539332 TLX1NBP0CAT3 122 aa5.75□□□□□ -1.49
DDB1-213ENST00000539332 LINC01547P58512 204 aaPredicted RBP5.75□□□□□ -1.49
DDB1-213ENST00000539332 SYCNQ0VAF6 134 aa5.75□□□□□ -1.49
DDB1-213ENST00000539332 Q6ZRN7 208 aaPredicted RBP5.75□□□□□ -1.49
DDB1-213ENST00000539332 PSCAO43653 123 aa5.75□□□□□ -1.49
DDB1-213ENST00000539332 Q8NDZ9 215 aa5.75□□□□□ -1.49
DDB1-213ENST00000539332 PKIGQ9Y2B9 76 aa5.75□□□□□ -1.49
DDB1-213ENST00000539332 C6orf99Q4VX62 202 aa5.74□□□□□ -1.49
DDB1-213ENST00000539332 Q6ZVQ6 151 aa5.74□□□□□ -1.49
DDB1-213ENST00000539332 LAMTOR3Q9UHA4 124 aa5.74□□□□□ -1.49
DDB1-213ENST00000539332 LCE6AA0A183 80 aa5.73□□□□□ -1.49
DDB1-213ENST00000539332 HAMPP81172 84 aa5.72□□□□□ -1.49
DDB1-213ENST00000539332 C1orf134Q5TEV5 83 aa5.72□□□□□ -1.49
DDB1-213ENST00000539332 DNAH2Q9P225 4427 aa5.72□□□□□ -1.49
DDB1-213ENST00000539332 CNBPP62633 177 aaKnown RBP5.72□□□□□ -1.49
DDB1-213ENST00000539332 SACSQ9NZJ4 4579 aa5.71□□□□□ -1.49
DDB1-213ENST00000539332 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.71□□□□□ -1.5
DDB1-213ENST00000539332 Q6ZRP5 223 aa5.71□□□□□ -1.5
DDB1-213ENST00000539332 HYDINQ4G0P3 5121 aa5.71□□□□□ -1.5
DDB1-213ENST00000539332 TRBV7-6A0A0J9YX20 115 aa5.7□□□□□ -1.5
DDB1-213ENST00000539332 LRCOL1A6NCL2 159 aa5.7□□□□□ -1.5
DDB1-213ENST00000539332 IGLV6-57P01721 117 aa5.7□□□□□ -1.5
DDB1-213ENST00000539332 C14orf177Q52M58 125 aa5.7□□□□□ -1.5
DDB1-213ENST00000539332 KMT2CQ8NEZ4 4911 aaKnown RBP5.7□□□□□ -1.5
DDB1-213ENST00000539332 TRBV7-4A0A0J9YYF1 115 aa5.7□□□□□ -1.5
DDB1-213ENST00000539332 F8WEM9 126 aa5.7□□□□□ -1.5
DDB1-213ENST00000539332 XAGE1AQ9HD64 81 aa5.7□□□□□ -1.5
DDB1-213ENST00000539332 FRAS1Q86XX4 4008 aa5.7□□□□□ -1.5
DDB1-213ENST00000539332 SEC61BP60468 96 aaKnown RBP5.69□□□□□ -1.5
DDB1-213ENST00000539332 PRR3P79522 188 aaKnown RBP5.69□□□□□ -1.5
DDB1-213ENST00000539332 DIRC1Q969H9 104 aa5.68□□□□□ -1.5
DDB1-213ENST00000539332 IGLV5-37A0A075B6J1 123 aa5.67□□□□□ -1.5
DDB1-213ENST00000539332 A0A087WTM6 91 aa5.67□□□□□ -1.5
DDB1-213ENST00000539332 RTL8CO15255 209 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms