RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 CAMK2N2Q96S95 79 aa9.66□□□□□ -0.86
CDCA3-207ENST00000538862 PKIGQ9Y2B9 76 aa9.66□□□□□ -0.86
CDCA3-207ENST00000538862 EPM2AB3EWF7 344 aa9.65□□□□□ -0.86
CDCA3-207ENST00000538862 USP17L23D6RBM5 183 aa9.65□□□□□ -0.86
CDCA3-207ENST00000538862 GHRHP01286 108 aa9.65□□□□□ -0.86
CDCA3-207ENST00000538862 PDE6GP18545 87 aa9.65□□□□□ -0.86
CDCA3-207ENST00000538862 Q6ZQY7 126 aa9.65□□□□□ -0.86
CDCA3-207ENST00000538862 STARD9Q9P2P6 4700 aa9.65□□□□□ -0.87
CDCA3-207ENST00000538862 ZNF73O43830 326 aaPredicted RBP9.64□□□□□ -0.87
CDCA3-207ENST00000538862 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.64□□□□□ -0.87
CDCA3-207ENST00000538862 SERP2Q8N6R1 65 aa9.64□□□□□ -0.87
CDCA3-207ENST00000538862 DSCR8Q96T75 97 aa9.64□□□□□ -0.87
CDCA3-207ENST00000538862 VPREB1P12018 145 aa9.64□□□□□ -0.87
CDCA3-207ENST00000538862 COX7BP24311 80 aa9.63□□□□□ -0.87
CDCA3-207ENST00000538862 ELOF1P60002 83 aaKnown RBP9.63□□□□□ -0.87
CDCA3-207ENST00000538862 HIGD2BQ4VC39 106 aa9.63□□□□□ -0.87
CDCA3-207ENST00000538862 Q6ZTC4 211 aa9.63□□□□□ -0.87
CDCA3-207ENST00000538862 M0R378 163 aa9.62□□□□□ -0.87
CDCA3-207ENST00000538862 UPK3BQ9BT76 320 aa9.62□□□□□ -0.87
CDCA3-207ENST00000538862 TENM2Q9NT68 2774 aa9.62□□□□□ -0.87
CDCA3-207ENST00000538862 ESRGQ1W209 222 aa9.62□□□□□ -0.87
CDCA3-207ENST00000538862 C15orf56Q8N910 161 aa9.62□□□□□ -0.87
CDCA3-207ENST00000538862 Q6ZRU5 148 aa9.61□□□□□ -0.87
CDCA3-207ENST00000538862 FAM236DA0A1B0GTK5 79 aa9.6□□□□□ -0.87
CDCA3-207ENST00000538862 C3orf84H3BNL1 204 aa9.6□□□□□ -0.87
CDCA3-207ENST00000538862 FAM236CP0DP71 79 aa9.6□□□□□ -0.87
CDCA3-207ENST00000538862 CASC10Q5T4H9 136 aa9.6□□□□□ -0.87
CDCA3-207ENST00000538862 LINC01556Q5JQF7 62 aa9.6□□□□□ -0.87
CDCA3-207ENST00000538862 SERP1Q9Y6X1 66 aa9.59□□□□□ -0.87
CDCA3-207ENST00000538862 RYR3Q15413 4870 aa9.58□□□□□ -0.88
CDCA3-207ENST00000538862 FAM19A1Q7Z5A9 133 aa9.58□□□□□ -0.88
CDCA3-207ENST00000538862 TRBV7-4A0A0J9YYF1 115 aa9.56□□□□□ -0.88
CDCA3-207ENST00000538862 DYNC2H1Q8NCM8 4307 aaKnown RBP9.56□□□□□ -0.88
CDCA3-207ENST00000538862 M0R2N4 97 aa9.56□□□□□ -0.88
CDCA3-207ENST00000538862 DEFB131BA0A096LNP1 70 aa9.55□□□□□ -0.88
CDCA3-207ENST00000538862 LINC00528Q8N1L1 170 aa9.55□□□□□ -0.88
CDCA3-207ENST00000538862 LYSTQ99698 3801 aa9.55□□□□□ -0.88
CDCA3-207ENST00000538862 CYSTM1Q9H1C7 97 aa9.55□□□□□ -0.88
CDCA3-207ENST00000538862 IGKV2D-24A0A075B6R9 120 aa9.54□□□□□ -0.88
CDCA3-207ENST00000538862 BCE1O60756 84 aa9.54□□□□□ -0.88
CDCA3-207ENST00000538862 LINC01547P58512 204 aaPredicted RBP9.54□□□□□ -0.88
CDCA3-207ENST00000538862 Q6ZVQ6 151 aa9.54□□□□□ -0.88
CDCA3-207ENST00000538862 Q6ZRP5 223 aa9.54□□□□□ -0.88
CDCA3-207ENST00000538862 C11orf45Q8TAV5 145 aa9.54□□□□□ -0.88
CDCA3-207ENST00000538862 CXCL6P80162 114 aa9.53□□□□□ -0.88
CDCA3-207ENST00000538862 SYCNQ0VAF6 134 aa9.53□□□□□ -0.88
CDCA3-207ENST00000538862 SMIM26A0A096LP01 95 aa9.52□□□□□ -0.88
CDCA3-207ENST00000538862 DNAH10OSP0CZ25 163 aa9.52□□□□□ -0.89
CDCA3-207ENST00000538862 SACSQ9NZJ4 4579 aa9.52□□□□□ -0.89
CDCA3-207ENST00000538862 HAMPP81172 84 aa9.51□□□□□ -0.89
CDCA3-207ENST00000538862 PLECQ15149 4684 aaKnown RBP9.51□□□□□ -0.89
CDCA3-207ENST00000538862 RYR2Q92736 4967 aa9.5□□□□□ -0.89
CDCA3-207ENST00000538862 KCNQ1DNQ9H478 68 aa9.49□□□□□ -0.89
CDCA3-207ENST00000538862 TLX1NBP0CAT3 122 aa9.48□□□□□ -0.89
CDCA3-207ENST00000538862 NKAPP1Q8N9T2 125 aa9.48□□□□□ -0.89
CDCA3-207ENST00000538862 HYDINQ4G0P3 5121 aa9.47□□□□□ -0.89
CDCA3-207ENST00000538862 PLA2G2DQ9UNK4 145 aa9.47□□□□□ -0.89
CDCA3-207ENST00000538862 TRAV7A0A075B6U4 112 aa9.45□□□□□ -0.9
CDCA3-207ENST00000538862 C7orf33Q8WU49 177 aa9.44□□□□□ -0.9
CDCA3-207ENST00000538862 TRAV10A0A0B4J240 114 aa9.44□□□□□ -0.9
CDCA3-207ENST00000538862 SERTAD4-AS1Q5TG53 156 aa9.44□□□□□ -0.9
CDCA3-207ENST00000538862 ALMS1Q8TCU4 4167 aa9.44□□□□□ -0.9
CDCA3-207ENST00000538862 LCE6AA0A183 80 aa9.43□□□□□ -0.9
CDCA3-207ENST00000538862 CD164Q04900 197 aa9.43□□□□□ -0.9
CDCA3-207ENST00000538862 DNAH1Q9P2D7 4330 aa9.43□□□□□ -0.9
CDCA3-207ENST00000538862 IGLV5-37A0A075B6J1 123 aa9.43□□□□□ -0.9
CDCA3-207ENST00000538862 BRK1Q8WUW1 75 aa9.42□□□□□ -0.9
CDCA3-207ENST00000538862 NUPR2A6NF83 97 aa9.41□□□□□ -0.9
CDCA3-207ENST00000538862 PMAIP1Q13794 54 aa9.41□□□□□ -0.9
CDCA3-207ENST00000538862 LINC00588Q9Y4M8 146 aa9.41□□□□□ -0.9
CDCA3-207ENST00000538862 DHRS4-AS1Q9P1J3 65 aa9.41□□□□□ -0.9
CDCA3-207ENST00000538862 PRYO14603 147 aa9.4□□□□□ -0.9
CDCA3-207ENST00000538862 RMI2Q96E14 147 aa9.4□□□□□ -0.9
CDCA3-207ENST00000538862 ATP5EP56381 51 aaPredicted RBP9.39□□□□□ -0.91
CDCA3-207ENST00000538862 C20orf197Q8N268 126 aa9.39□□□□□ -0.91
CDCA3-207ENST00000538862 Q8N377 158 aa9.39□□□□□ -0.91
CDCA3-207ENST00000538862 IGLV5-48A0A075B6I7 105 aa9.39□□□□□ -0.91
CDCA3-207ENST00000538862 FP248Q71RG6 208 aaPredicted RBP9.39□□□□□ -0.91
CDCA3-207ENST00000538862 IGLV1-50A0A075B6I6 118 aa9.38□□□□□ -0.91
CDCA3-207ENST00000538862 A0A0U1RQV1 116 aa9.38□□□□□ -0.91
CDCA3-207ENST00000538862 KRTAP4-16G5E9R7 235 aaPredicted RBP9.38□□□□□ -0.91
CDCA3-207ENST00000538862 SPRR1AP35321 89 aa9.38□□□□□ -0.91
CDCA3-207ENST00000538862 Q6ZRX8 168 aa9.38□□□□□ -0.91
CDCA3-207ENST00000538862 SCXQ7RTU7 201 aa9.37□□□□□ -0.91
CDCA3-207ENST00000538862 A0A1B0GW54 56 aa9.37□□□□□ -0.91
CDCA3-207ENST00000538862 NREPQ16612 68 aa9.36□□□□□ -0.91
CDCA3-207ENST00000538862 KMT2AQ03164 3969 aa9.36□□□□□ -0.91
CDCA3-207ENST00000538862 LY6G6CO95867 125 aa9.35□□□□□ -0.91
CDCA3-207ENST00000538862 KLKP1Q107X0 134 aa9.35□□□□□ -0.91
CDCA3-207ENST00000538862 DEFB105AQ8NG35 78 aa9.35□□□□□ -0.91
CDCA3-207ENST00000538862 LINC00476Q8WZB0 136 aa9.35□□□□□ -0.91
CDCA3-207ENST00000538862 ETDCA0A1B0GVM5 59 aa9.34□□□□□ -0.91
CDCA3-207ENST00000538862 RPL37AP8A6NKH3 93 aa9.34□□□□□ -0.91
CDCA3-207ENST00000538862 PRR15Q8IV56 129 aa9.34□□□□□ -0.91
CDCA3-207ENST00000538862 Q9BRP9 147 aa9.34□□□□□ -0.91
CDCA3-207ENST00000538862 FAM168BA1KXE4 195 aa9.33□□□□□ -0.92
CDCA3-207ENST00000538862 KRTAP7-1Q8IUC3 87 aa9.32□□□□□ -0.92
CDCA3-207ENST00000538862 H7BZZ5 65 aa9.31□□□□□ -0.92
CDCA3-207ENST00000538862 MRPL55Q7Z7F7 128 aaKnown RBP9.31□□□□□ -0.92
CDCA3-207ENST00000538862 VPS13DQ5THJ4 4388 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms