RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 GHRHP01286 108 aa9.05□□□□□ -0.96
LIMK1-208ENST00000538333 KRTAP7-1Q8IUC3 87 aa9.05□□□□□ -0.96
LIMK1-208ENST00000538333 STAB2Q8WWQ8 2551 aa9.05□□□□□ -0.96
LIMK1-208ENST00000538333 M0R2N4 97 aa9.05□□□□□ -0.96
LIMK1-208ENST00000538333 DSCR8Q96T75 97 aa9.05□□□□□ -0.96
LIMK1-208ENST00000538333 DYNC2H1Q8NCM8 4307 aaKnown RBP9.04□□□□□ -0.96
LIMK1-208ENST00000538333 TRBV7-4A0A0J9YYF1 115 aa9.03□□□□□ -0.96
LIMK1-208ENST00000538333 APLNQ9ULZ1 77 aa9.03□□□□□ -0.96
LIMK1-208ENST00000538333 PDE6GP18545 87 aa9.03□□□□□ -0.96
LIMK1-208ENST00000538333 B9D2Q9BPU9 175 aa9.03□□□□□ -0.96
LIMK1-208ENST00000538333 DNAH10Q8IVF4 4471 aa9.02□□□□□ -0.97
LIMK1-208ENST00000538333 IGLV1-50A0A075B6I6 118 aa9.02□□□□□ -0.97
LIMK1-208ENST00000538333 KRTAP4-16G5E9R7 235 aaPredicted RBP9.02□□□□□ -0.97
LIMK1-208ENST00000538333 ATP5EP2Q5VTU8 51 aa9.02□□□□□ -0.97
LIMK1-208ENST00000538333 LOC107984640A0A0U1RRK4 108 aa9.01□□□□□ -0.97
LIMK1-208ENST00000538333 UBL5Q9BZL1 73 aa9.01□□□□□ -0.97
LIMK1-208ENST00000538333 SPRR1AP35321 89 aa9□□□□□ -0.97
LIMK1-208ENST00000538333 RPL37AP8A6NKH3 93 aa9□□□□□ -0.97
LIMK1-208ENST00000538333 PRYO14603 147 aa9□□□□□ -0.97
LIMK1-208ENST00000538333 A0A087WVE0 104 aa8.99□□□□□ -0.97
LIMK1-208ENST00000538333 B5MCH6 92 aa8.99□□□□□ -0.97
LIMK1-208ENST00000538333 MEGF8Q7Z7M0 2845 aa8.99□□□□□ -0.97
LIMK1-208ENST00000538333 Q6ZRX8 168 aa8.99□□□□□ -0.97
LIMK1-208ENST00000538333 CSMD3Q7Z407 3707 aa8.97□□□□□ -0.97
LIMK1-208ENST00000538333 FAM19A5Q7Z5A7 132 aaPredicted RBP8.97□□□□□ -0.97
LIMK1-208ENST00000538333 MRPL55Q7Z7F7 128 aaKnown RBP8.97□□□□□ -0.97
LIMK1-208ENST00000538333 UBE2DNLQ8IWF7 75 aa8.97□□□□□ -0.97
LIMK1-208ENST00000538333 Q9BRP9 147 aa8.97□□□□□ -0.97
LIMK1-208ENST00000538333 CNBPP62633 177 aaKnown RBP8.96□□□□□ -0.97
LIMK1-208ENST00000538333 PRKDCP78527 4128 aaKnown RBP8.96□□□□□ -0.98
LIMK1-208ENST00000538333 ATOX1O00244 68 aa8.96□□□□□ -0.98
LIMK1-208ENST00000538333 LINC01547P58512 204 aaPredicted RBP8.96□□□□□ -0.98
LIMK1-208ENST00000538333 Q6ZVQ6 151 aa8.96□□□□□ -0.98
LIMK1-208ENST00000538333 Q8N377 158 aa8.96□□□□□ -0.98
LIMK1-208ENST00000538333 DHRS4-AS1Q9P1J3 65 aa8.96□□□□□ -0.98
LIMK1-208ENST00000538333 DNAH7Q8WXX0 4024 aa8.96□□□□□ -0.98
LIMK1-208ENST00000538333 ETDCA0A1B0GVM5 59 aa8.93□□□□□ -0.98
LIMK1-208ENST00000538333 FAM19A1Q7Z5A9 133 aa8.93□□□□□ -0.98
LIMK1-208ENST00000538333 A0A096LNI7 61 aa8.93□□□□□ -0.98
LIMK1-208ENST00000538333 C16orf90A8MZG2 172 aa8.93□□□□□ -0.98
LIMK1-208ENST00000538333 PSCAO43653 123 aa8.93□□□□□ -0.98
LIMK1-208ENST00000538333 PLECQ15149 4684 aaKnown RBP8.92□□□□□ -0.98
LIMK1-208ENST00000538333 UQCRQO14949 82 aa8.92□□□□□ -0.98
LIMK1-208ENST00000538333 C3orf22Q8N5N4 141 aa8.92□□□□□ -0.98
LIMK1-208ENST00000538333 DEFB105AQ8NG35 78 aa8.92□□□□□ -0.98
LIMK1-208ENST00000538333 IGLV5-48A0A075B6I7 105 aa8.91□□□□□ -0.98
LIMK1-208ENST00000538333 COX7CP15954 63 aa8.91□□□□□ -0.98
LIMK1-208ENST00000538333 REG3GQ6UW15 175 aa8.89□□□□□ -0.99
LIMK1-208ENST00000538333 A0A1W2PNN7 141 aa8.89□□□□□ -0.99
LIMK1-208ENST00000538333 NUPR2A6NF83 97 aa8.89□□□□□ -0.99
LIMK1-208ENST00000538333 CXCL6P80162 114 aa8.89□□□□□ -0.99
LIMK1-208ENST00000538333 HAMPP81172 84 aa8.89□□□□□ -0.99
LIMK1-208ENST00000538333 SS18L2Q9UHA2 77 aa8.89□□□□□ -0.99
LIMK1-208ENST00000538333 IGKV2-24A0A0C4DH68 120 aa8.88□□□□□ -0.99
LIMK1-208ENST00000538333 ERC2-IT1O76042 136 aa8.88□□□□□ -0.99
LIMK1-208ENST00000538333 TNP2Q05952 138 aa8.88□□□□□ -0.99
LIMK1-208ENST00000538333 C14orf177Q52M58 125 aa8.88□□□□□ -0.99
LIMK1-208ENST00000538333 ST20-AS1Q8NBB2 130 aa8.88□□□□□ -0.99
LIMK1-208ENST00000538333 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.88□□□□□ -0.99
LIMK1-208ENST00000538333 NBDYA0A0U1RRE5 68 aa8.87□□□□□ -0.99
LIMK1-208ENST00000538333 LRCOL1A6NCL2 159 aa8.87□□□□□ -0.99
LIMK1-208ENST00000538333 C9orf153Q5TBE3 101 aa8.86□□□□□ -0.99
LIMK1-208ENST00000538333 SERP2Q8N6R1 65 aa8.86□□□□□ -0.99
LIMK1-208ENST00000538333 TENM2Q9NT68 2774 aa8.86□□□□□ -0.99
LIMK1-208ENST00000538333 UBE2BP63146 152 aa8.85□□□□□ -0.99
LIMK1-208ENST00000538333 Q6ZRN7 208 aaPredicted RBP8.85□□□□□ -0.99
LIMK1-208ENST00000538333 FBN3Q75N90 2809 aa8.84□□□□□ -0.99
LIMK1-208ENST00000538333 STARD9Q9P2P6 4700 aa8.84□□□□□ -0.99
LIMK1-208ENST00000538333 CRYGAP11844 174 aa8.83□□□□□ -1
LIMK1-208ENST00000538333 C9orf163Q8N9P6 203 aa8.83□□□□□ -1
LIMK1-208ENST00000538333 CHTF8P0CG12 524 aa8.82□□□□□ -1
LIMK1-208ENST00000538333 VPS13DQ5THJ4 4388 aa8.82□□□□□ -1
LIMK1-208ENST00000538333 A0A1W2PNM2 257 aa8.81□□□□□ -1
LIMK1-208ENST00000538333 SCXQ7RTU7 201 aa8.81□□□□□ -1
LIMK1-208ENST00000538333 SMIM29Q86T20 159 aa8.8□□□□□ -1
LIMK1-208ENST00000538333 C3orf84H3BNL1 204 aa8.8□□□□□ -1
LIMK1-208ENST00000538333 C1orf137Q5JT78 98 aa8.8□□□□□ -1
LIMK1-208ENST00000538333 KRTAP11-1Q8IUC1 163 aa8.8□□□□□ -1
LIMK1-208ENST00000538333 PRLHP81277 87 aa8.79□□□□□ -1
LIMK1-208ENST00000538333 A0A1B0GW54 56 aa8.79□□□□□ -1
LIMK1-208ENST00000538333 BCE1O60756 84 aa8.78□□□□□ -1
LIMK1-208ENST00000538333 NREPQ16612 68 aa8.78□□□□□ -1
LIMK1-208ENST00000538333 PHF5AQ7RTV0 110 aaKnown RBP8.78□□□□□ -1
LIMK1-208ENST00000538333 CYSTM1Q9H1C7 97 aa8.78□□□□□ -1
LIMK1-208ENST00000538333 FUSP35637 526 aaKnown RBP eCLIP8.78□□□□□ -1
LIMK1-208ENST00000538333 Q8NBF4 154 aa8.78□□□□□ -1
LIMK1-208ENST00000538333 TGP01266 2768 aa8.77□□□□□ -1.01
LIMK1-208ENST00000538333 SPRR4Q96PI1 79 aa8.76□□□□□ -1.01
LIMK1-208ENST00000538333 PKIGQ9Y2B9 76 aa8.76□□□□□ -1.01
LIMK1-208ENST00000538333 PANO1I0J062 215 aa8.75□□□□□ -1.01
LIMK1-208ENST00000538333 IGKV4-1P06312 121 aa8.74□□□□□ -1.01
LIMK1-208ENST00000538333 H0Y9J4 135 aa8.73□□□□□ -1.01
LIMK1-208ENST00000538333 LINC00476Q8WZB0 136 aa8.73□□□□□ -1.01
LIMK1-208ENST00000538333 HIGD2AQ9BW72 106 aa8.73□□□□□ -1.01
LIMK1-208ENST00000538333 LINC00474Q9P2X8 69 aa8.73□□□□□ -1.01
LIMK1-208ENST00000538333 Q8N9L7 120 aa8.73□□□□□ -1.01
LIMK1-208ENST00000538333 BPY2O14599 106 aa8.72□□□□□ -1.01
LIMK1-208ENST00000538333 IGLV8-61A0A075B6I0 122 aa8.72□□□□□ -1.01
LIMK1-208ENST00000538333 TRAV7A0A075B6U4 112 aa8.72□□□□□ -1.01
LIMK1-208ENST00000538333 EPM2AB3EWF7 344 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms