RNA–Protein interactions for RNA: ENST00000538174.6

PTPRB-203, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best)

Gene PTPRB, Length 2,661 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-203ENST00000538174 Q8IZM0 81 aa4.6□□□□□ -1.67
PTPRB-203ENST00000538174 PRSS2P07478 247 aa4.59□□□□□ -1.67
PTPRB-203ENST00000538174 COX7B2Q8TF08 81 aa4.59□□□□□ -1.67
PTPRB-203ENST00000538174 OBSCN-AS1Q96MR7 158 aa4.59□□□□□ -1.67
PTPRB-203ENST00000538174 NDUFC1O43677 76 aa4.59□□□□□ -1.67
PTPRB-203ENST00000538174 Q6ZTI0 123 aa4.59□□□□□ -1.67
PTPRB-203ENST00000538174 LINC00167Q96N53 147 aa4.59□□□□□ -1.67
PTPRB-203ENST00000538174 NBEAL2Q6ZNJ1 2754 aa4.59□□□□□ -1.68
PTPRB-203ENST00000538174 A0A1B0GVY2 172 aa4.59□□□□□ -1.68
PTPRB-203ENST00000538174 COX6A2Q02221 97 aa4.59□□□□□ -1.68
PTPRB-203ENST00000538174 KLKP1Q107X0 134 aa4.59□□□□□ -1.68
PTPRB-203ENST00000538174 LINC00269Q8N2A0 174 aa4.59□□□□□ -1.68
PTPRB-203ENST00000538174 PRO0255Q9UI72 69 aa4.59□□□□□ -1.68
PTPRB-203ENST00000538174 HUWE1Q7Z6Z7 4374 aaKnown RBP4.58□□□□□ -1.68
PTPRB-203ENST00000538174 SYCNQ0VAF6 134 aa4.58□□□□□ -1.68
PTPRB-203ENST00000538174 PCLOQ9Y6V0 5065 aa4.57□□□□□ -1.68
PTPRB-203ENST00000538174 GVQW2A0A096LPI5 108 aaPredicted RBP4.57□□□□□ -1.68
PTPRB-203ENST00000538174 Q1RN00 199 aa4.57□□□□□ -1.68
PTPRB-203ENST00000538174 REG3GQ6UW15 175 aa4.57□□□□□ -1.68
PTPRB-203ENST00000538174 NOP10Q9NPE3 64 aaKnown RBP4.57□□□□□ -1.68
PTPRB-203ENST00000538174 HECTD4Q9Y4D8 3996 aa4.57□□□□□ -1.68
PTPRB-203ENST00000538174 IGHV3-73A0A0B4J1V6 119 aa4.57□□□□□ -1.68
PTPRB-203ENST00000538174 TRGV4A0A0C4DH28 118 aa4.57□□□□□ -1.68
PTPRB-203ENST00000538174 MIFP14174 115 aa4.57□□□□□ -1.68
PTPRB-203ENST00000538174 TRGV2A0A075B6R0 118 aa4.56□□□□□ -1.68
PTPRB-203ENST00000538174 NANOS2P60321 138 aaKnown RBP4.56□□□□□ -1.68
PTPRB-203ENST00000538174 SPTSSBQ8NFR3 76 aa4.56□□□□□ -1.68
PTPRB-203ENST00000538174 DNAH10Q8IVF4 4471 aa4.56□□□□□ -1.68
PTPRB-203ENST00000538174 LINC00959A0A1B0GUT2 108 aa4.56□□□□□ -1.68
PTPRB-203ENST00000538174 F8WEM9 126 aa4.56□□□□□ -1.68
PTPRB-203ENST00000538174 HYDINQ4G0P3 5121 aa4.56□□□□□ -1.68
PTPRB-203ENST00000538174 PLECQ15149 4684 aaKnown RBP4.55□□□□□ -1.68
PTPRB-203ENST00000538174 C16orf90A8MZG2 172 aa4.55□□□□□ -1.68
PTPRB-203ENST00000538174 A8MU10 97 aa4.55□□□□□ -1.68
PTPRB-203ENST00000538174 CRPP02741 224 aa4.55□□□□□ -1.68
PTPRB-203ENST00000538174 A0A0J9YWU9 116 aa4.54□□□□□ -1.68
PTPRB-203ENST00000538174 IGHV4-30-4P0DP06 118 aa4.54□□□□□ -1.68
PTPRB-203ENST00000538174 HTN1P15515 57 aa4.54□□□□□ -1.68
PTPRB-203ENST00000538174 IGHV3-64A0A075B6Q5 118 aa4.53□□□□□ -1.68
PTPRB-203ENST00000538174 IGHV3-38A0A0C4DH36 116 aa4.53□□□□□ -1.68
PTPRB-203ENST00000538174 BCE1O60756 84 aa4.53□□□□□ -1.68
PTPRB-203ENST00000538174 PRR34Q9NV39 138 aa4.53□□□□□ -1.68
PTPRB-203ENST00000538174 COL7A1Q02388 2944 aa4.53□□□□□ -1.69
PTPRB-203ENST00000538174 DNAH17Q9UFH2 4485 aa4.52□□□□□ -1.69
PTPRB-203ENST00000538174 JMJD7-PLA2G4BH0Y9G9 81 aa4.52□□□□□ -1.69
PTPRB-203ENST00000538174 LELP1Q5T871 98 aa4.52□□□□□ -1.69
PTPRB-203ENST00000538174 Q6ZRP5 223 aa4.52□□□□□ -1.69
PTPRB-203ENST00000538174 IGKV2-28A0A075B6P5 120 aa4.52□□□□□ -1.69
PTPRB-203ENST00000538174 IGKV2D-28P01615 120 aa4.52□□□□□ -1.69
PTPRB-203ENST00000538174 ATP5EP2Q5VTU8 51 aa4.52□□□□□ -1.69
PTPRB-203ENST00000538174 Q6JHZ5 121 aa4.52□□□□□ -1.69
PTPRB-203ENST00000538174 DYNC1H1Q14204 4646 aaKnown RBP4.52□□□□□ -1.69
PTPRB-203ENST00000538174 TRBV10-3A0A0K0K1G6 114 aa4.51□□□□□ -1.69
PTPRB-203ENST00000538174 CCL18P55774 89 aa4.51□□□□□ -1.69
PTPRB-203ENST00000538174 PDE6GP18545 87 aa4.51□□□□□ -1.69
PTPRB-203ENST00000538174 MIR7-3HGQ8N6C7 128 aa4.51□□□□□ -1.69
PTPRB-203ENST00000538174 IGLV4-60A0A075B6I1 120 aa4.5□□□□□ -1.69
PTPRB-203ENST00000538174 HCG22E2RYF7 251 aa4.5□□□□□ -1.69
PTPRB-203ENST00000538174 BAALC-AS2P0C853 105 aa4.5□□□□□ -1.69
PTPRB-203ENST00000538174 C22orf24Q9Y442 160 aa4.5□□□□□ -1.69
PTPRB-203ENST00000538174 TRAV7A0A075B6U4 112 aa4.5□□□□□ -1.69
PTPRB-203ENST00000538174 A0A087WVE0 104 aa4.5□□□□□ -1.69
PTPRB-203ENST00000538174 TRAV22A0A0B4J277 110 aa4.5□□□□□ -1.69
PTPRB-203ENST00000538174 RNASE13Q5GAN3 156 aaKnown RBP4.5□□□□□ -1.69
PTPRB-203ENST00000538174 H7C2G1 150 aa4.49□□□□□ -1.69
PTPRB-203ENST00000538174 SPART-AS1P0CW21 52 aa4.49□□□□□ -1.69
PTPRB-203ENST00000538174 Q8NAQ8 132 aa4.49□□□□□ -1.69
PTPRB-203ENST00000538174 RMI2Q96E14 147 aa4.49□□□□□ -1.69
PTPRB-203ENST00000538174 RETNLBQ9BQ08 111 aa4.49□□□□□ -1.69
PTPRB-203ENST00000538174 DNAH11Q96DT5 4516 aa4.49□□□□□ -1.69
PTPRB-203ENST00000538174 A0A1B0GW54 56 aa4.49□□□□□ -1.69
PTPRB-203ENST00000538174 Q8N1X5 172 aa4.49□□□□□ -1.69
PTPRB-203ENST00000538174 SMIM11BQ8TCY0 68 aa4.49□□□□□ -1.69
PTPRB-203ENST00000538174 FAT2Q9NYQ8 4349 aa4.48□□□□□ -1.69
PTPRB-203ENST00000538174 FAM229AH3BQW9 127 aa4.48□□□□□ -1.69
PTPRB-203ENST00000538174 DNAL4O96015 105 aa4.48□□□□□ -1.69
PTPRB-203ENST00000538174 ADM2Q7Z4H4 148 aa4.48□□□□□ -1.69
PTPRB-203ENST00000538174 NOTCH3Q9UM47 2321 aa4.48□□□□□ -1.69
PTPRB-203ENST00000538174 KRTAP16-1A8MUX0 517 aa4.48□□□□□ -1.69
PTPRB-203ENST00000538174 LINC00158P58513 81 aa4.48□□□□□ -1.69
PTPRB-203ENST00000538174 ORMDL1Q9P0S3 153 aa4.47□□□□□ -1.69
PTPRB-203ENST00000538174 LOC110117498A0A087WWA1 95 aa4.47□□□□□ -1.69
PTPRB-203ENST00000538174 SNURFQ9Y675 71 aa4.47□□□□□ -1.69
PTPRB-203ENST00000538174 IGKV3D-7A0A0C4DH55 119 aa4.46□□□□□ -1.7
PTPRB-203ENST00000538174 LY6G6CO95867 125 aa4.46□□□□□ -1.7
PTPRB-203ENST00000538174 STARD9Q9P2P6 4700 aa4.46□□□□□ -1.7
PTPRB-203ENST00000538174 TENM2Q9NT68 2774 aa4.46□□□□□ -1.7
PTPRB-203ENST00000538174 IGLV6-57P01721 117 aa4.46□□□□□ -1.7
PTPRB-203ENST00000538174 DEFB104AQ8WTQ1 72 aa4.46□□□□□ -1.7
PTPRB-203ENST00000538174 PRAC1Q96KF2 57 aa4.46□□□□□ -1.7
PTPRB-203ENST00000538174 Q5VV11 94 aa4.45□□□□□ -1.7
PTPRB-203ENST00000538174 Q8N814 137 aa4.45□□□□□ -1.7
PTPRB-203ENST00000538174 hDV103S1A0JD37 113 aa4.44□□□□□ -1.7
PTPRB-203ENST00000538174 CHTF8P0CG12 524 aa4.44□□□□□ -1.7
PTPRB-203ENST00000538174 C9orf116Q5BN46 136 aaPredicted RBP4.44□□□□□ -1.7
PTPRB-203ENST00000538174 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.43□□□□□ -1.7
PTPRB-203ENST00000538174 LINC00575Q6W349 94 aa4.43□□□□□ -1.7
PTPRB-203ENST00000538174 WFDC10AQ9H1F0 79 aa4.43□□□□□ -1.7
PTPRB-203ENST00000538174 SORL1Q92673 2214 aa4.43□□□□□ -1.7
PTPRB-203ENST00000538174 TRAV23DV6A0A075B6W5 121 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms