RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 SLC7A5P1Q8MH63 180 aa5.06□□□□□ -1.6
COPB1-211ENST00000534234 SPANXB1Q9NS25 103 aaPredicted RBP5.06□□□□□ -1.6
COPB1-211ENST00000534234 IGLV9-49A0A0B4J1Y8 123 aa5.05□□□□□ -1.6
COPB1-211ENST00000534234 H3BS24 57 aa5.05□□□□□ -1.6
COPB1-211ENST00000534234 NDUFC2O95298 119 aa5.05□□□□□ -1.6
COPB1-211ENST00000534234 Q6ZRX8 168 aa5.05□□□□□ -1.6
COPB1-211ENST00000534234 Q9BRP9 147 aa5.05□□□□□ -1.6
COPB1-211ENST00000534234 IGLV6-57P01721 117 aa5.04□□□□□ -1.6
COPB1-211ENST00000534234 NPC2P61916 151 aa5.04□□□□□ -1.6
COPB1-211ENST00000534234 ADAMTSL4-AS1Q5T5F5 129 aa5.04□□□□□ -1.6
COPB1-211ENST00000534234 SSBP3-AS1Q7Z2R9 100 aa5.04□□□□□ -1.6
COPB1-211ENST00000534234 A0A0J9YXY3 114 aa5.04□□□□□ -1.6
COPB1-211ENST00000534234 MOBPQ13875 183 aa5.04□□□□□ -1.6
COPB1-211ENST00000534234 SOSTDC1Q6X4U4 206 aa5.04□□□□□ -1.6
COPB1-211ENST00000534234 TRAV23DV6A0A075B6W5 121 aa5.03□□□□□ -1.6
COPB1-211ENST00000534234 E9PLD3 99 aa5.03□□□□□ -1.6
COPB1-211ENST00000534234 JOSD1Q15040 202 aaPredicted RBP5.03□□□□□ -1.6
COPB1-211ENST00000534234 ZNF73O43830 326 aaPredicted RBP5.02□□□□□ -1.61
COPB1-211ENST00000534234 KRTAP13-3Q3SY46 172 aa5.02□□□□□ -1.61
COPB1-211ENST00000534234 SYS1-DBNDD2H3BUS1 97 aa5.01□□□□□ -1.61
COPB1-211ENST00000534234 HINT1P49773 126 aaPredicted RBP5.01□□□□□ -1.61
COPB1-211ENST00000534234 RPS29P62273 56 aaKnown RBP5.01□□□□□ -1.61
COPB1-211ENST00000534234 KRTAP4-8Q9BYQ9 185 aa5.01□□□□□ -1.61
COPB1-211ENST00000534234 Q8N377 158 aa5□□□□□ -1.61
COPB1-211ENST00000534234 CBY1Q9Y3M2 126 aa5□□□□□ -1.61
COPB1-211ENST00000534234 SLC25A20O43772 301 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 HIST1H2BKO60814 126 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 HIST1H2BJP06899 126 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 HIST1H2BOP23527 126 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 HIST1H2BBP33778 126 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 HIST1H2BDP58876 126 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 HIST1H2BCP62807 126 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 HIST2H2BEQ16778 126 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.99□□□□□ -1.61
COPB1-211ENST00000534234 ST20-AS1Q8NBB2 130 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 OR13C6PQ8NH95 151 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 LINC00308Q8TCZ7 52 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 HIST1H2BHQ93079 126 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 LITAFQ99732 161 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 HIST1H2BNQ99877 126 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 HIST1H2BMQ99879 126 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 SPANXCQ9NY87 97 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 ASB16-AS1Q495Z4 193 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 C9orf153Q5TBE3 101 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 LINC01545Q5VT33 79 aa4.99□□□□□ -1.61
COPB1-211ENST00000534234 C5orf52A6NGY3 159 aa4.98□□□□□ -1.61
COPB1-211ENST00000534234 TIMM17BO60830 172 aa4.98□□□□□ -1.61
COPB1-211ENST00000534234 PET117Q6UWS5 81 aa4.98□□□□□ -1.61
COPB1-211ENST00000534234 MUC17Q685J3 4493 aa4.97□□□□□ -1.61
COPB1-211ENST00000534234 ZNF815PA8K554 130 aa4.97□□□□□ -1.61
COPB1-211ENST00000534234 KRTAP9-2Q9BYQ4 174 aa4.97□□□□□ -1.61
COPB1-211ENST00000534234 SEC61BP60468 96 aaKnown RBP4.96□□□□□ -1.62
COPB1-211ENST00000534234 LINC00518Q8N0U6 118 aa4.96□□□□□ -1.62
COPB1-211ENST00000534234 TTTY13Q9BZ97 58 aa4.96□□□□□ -1.62
COPB1-211ENST00000534234 DHRS4-AS1Q9P1J3 65 aa4.96□□□□□ -1.62
COPB1-211ENST00000534234 FAT4Q6V0I7 4981 aa4.96□□□□□ -1.62
COPB1-211ENST00000534234 C3orf79P0CE67 100 aa4.95□□□□□ -1.62
COPB1-211ENST00000534234 SPANXDQ9BXN6 97 aa4.95□□□□□ -1.62
COPB1-211ENST00000534234 SPRR1BP22528 89 aa4.95□□□□□ -1.62
COPB1-211ENST00000534234 SLC25A34Q6PIV7 304 aa4.95□□□□□ -1.62
COPB1-211ENST00000534234 COX7BP24311 80 aa4.94□□□□□ -1.62
COPB1-211ENST00000534234 C6orf99Q4VX62 202 aa4.94□□□□□ -1.62
COPB1-211ENST00000534234 KRTAP4-1Q9BYQ7 146 aa4.94□□□□□ -1.62
COPB1-211ENST00000534234 LAMTOR3Q9UHA4 124 aa4.94□□□□□ -1.62
COPB1-211ENST00000534234 ELOF1P60002 83 aaKnown RBP4.93□□□□□ -1.62
COPB1-211ENST00000534234 KRTDAPP60985 99 aa4.93□□□□□ -1.62
COPB1-211ENST00000534234 TAL2Q16559 108 aa4.93□□□□□ -1.62
COPB1-211ENST00000534234 HRCT1Q6UXD1 115 aa4.93□□□□□ -1.62
COPB1-211ENST00000534234 SCGB1D4Q6XE38 83 aa4.93□□□□□ -1.62
COPB1-211ENST00000534234 COA6Q5JTJ3 125 aaKnown RBP4.92□□□□□ -1.62
COPB1-211ENST00000534234 DEFB105AQ8NG35 78 aa4.92□□□□□ -1.62
COPB1-211ENST00000534234 LINC01547P58512 204 aaPredicted RBP4.91□□□□□ -1.62
COPB1-211ENST00000534234 LIMD2Q9BT23 127 aa4.91□□□□□ -1.62
COPB1-211ENST00000534234 TRBV7-6A0A0J9YX20 115 aa4.91□□□□□ -1.62
COPB1-211ENST00000534234 Q1RN00 199 aa4.91□□□□□ -1.62
COPB1-211ENST00000534234 COPS9Q8WXC6 57 aa4.91□□□□□ -1.62
COPB1-211ENST00000534234 TEX49A0A1B0GTD5 131 aa4.9□□□□□ -1.63
COPB1-211ENST00000534234 C20orf202A1L168 122 aa4.9□□□□□ -1.63
COPB1-211ENST00000534234 A6NDN8 102 aa4.9□□□□□ -1.63
COPB1-211ENST00000534234 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.9□□□□□ -1.63
COPB1-211ENST00000534234 IFITM1P13164 125 aa4.9□□□□□ -1.63
COPB1-211ENST00000534234 Q6ZVH6 145 aa4.89□□□□□ -1.63
COPB1-211ENST00000534234 MUSTN1Q8IVN3 82 aa4.89□□□□□ -1.63
COPB1-211ENST00000534234 ATOH7Q8N100 152 aa4.89□□□□□ -1.63
COPB1-211ENST00000534234 PRO1933Q9H354 126 aa4.89□□□□□ -1.63
COPB1-211ENST00000534234 A0A1B0GWB2 263 aa4.88□□□□□ -1.63
COPB1-211ENST00000534234 AKR1D1P51857 326 aa4.88□□□□□ -1.63
COPB1-211ENST00000534234 CD164Q04900 197 aa4.88□□□□□ -1.63
COPB1-211ENST00000534234 PCP2Q8IVA1 136 aa4.88□□□□□ -1.63
COPB1-211ENST00000534234 KRTAP9-6A0A140TA67 174 aa4.87□□□□□ -1.63
COPB1-211ENST00000534234 C9orf92A6NGG3 77 aa4.87□□□□□ -1.63
COPB1-211ENST00000534234 SMIM29Q86T20 159 aa4.87□□□□□ -1.63
COPB1-211ENST00000534234 H7C2G1 150 aa4.87□□□□□ -1.63
COPB1-211ENST00000534234 IGLV5-48A0A075B6I7 105 aa4.86□□□□□ -1.63
COPB1-211ENST00000534234 A4D1N5 150 aa4.86□□□□□ -1.63
COPB1-211ENST00000534234 TRAV13-2A0A0B4J235 113 aa4.85□□□□□ -1.63
COPB1-211ENST00000534234 A0A0G2JQZ4 141 aa4.85□□□□□ -1.63
COPB1-211ENST00000534234 PCOTHQ58A44 107 aa4.85□□□□□ -1.63
COPB1-211ENST00000534234 SMIM11BQ8TCY0 68 aa4.85□□□□□ -1.63
COPB1-211ENST00000534234 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms