RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 ADAMTSL4-AS1Q5T5F5 129 aa9.83□□□□□ -0.84
UBXN1-216ENST00000533908 PMCHL2Q9BQD1 86 aa9.83□□□□□ -0.84
UBXN1-216ENST00000533908 ZNF73O43830 326 aaPredicted RBP9.82□□□□□ -0.84
UBXN1-216ENST00000533908 SVBPQ8N300 66 aa9.82□□□□□ -0.84
UBXN1-216ENST00000533908 NPC2P61916 151 aa9.81□□□□□ -0.84
UBXN1-216ENST00000533908 JOSD1Q15040 202 aaPredicted RBP9.81□□□□□ -0.84
UBXN1-216ENST00000533908 MIEN1Q9BRT3 115 aa9.81□□□□□ -0.84
UBXN1-216ENST00000533908 LEPROTL1O95214 131 aa9.8□□□□□ -0.84
UBXN1-216ENST00000533908 IGLV8-61A0A075B6I0 122 aa9.79□□□□□ -0.84
UBXN1-216ENST00000533908 PLNP26678 52 aa9.79□□□□□ -0.84
UBXN1-216ENST00000533908 NMUP48645 174 aa9.79□□□□□ -0.84
UBXN1-216ENST00000533908 HRCT1Q6UXD1 115 aa9.79□□□□□ -0.84
UBXN1-216ENST00000533908 C9orf92A6NGG3 77 aa9.78□□□□□ -0.84
UBXN1-216ENST00000533908 SERF1AO75920 110 aa9.78□□□□□ -0.84
UBXN1-216ENST00000533908 DPM2O94777 84 aa9.78□□□□□ -0.84
UBXN1-216ENST00000533908 LGALS3P17931 250 aaKnown RBP9.78□□□□□ -0.84
UBXN1-216ENST00000533908 A0A0J9YXY3 114 aa9.77□□□□□ -0.85
UBXN1-216ENST00000533908 C5orf52A6NGY3 159 aa9.77□□□□□ -0.85
UBXN1-216ENST00000533908 SPRR1BP22528 89 aa9.77□□□□□ -0.85
UBXN1-216ENST00000533908 TRGC2P03986 189 aa9.76□□□□□ -0.85
UBXN1-216ENST00000533908 FABP4P15090 132 aa9.76□□□□□ -0.85
UBXN1-216ENST00000533908 NDUFA5Q16718 116 aa9.76□□□□□ -0.85
UBXN1-216ENST00000533908 IGKCP01834 107 aa9.75□□□□□ -0.85
UBXN1-216ENST00000533908 HERVK_113P61574 105 aa9.75□□□□□ -0.85
UBXN1-216ENST00000533908 LORP23490 312 aaPredicted RBP9.73□□□□□ -0.85
UBXN1-216ENST00000533908 LITAFQ99732 161 aa9.72□□□□□ -0.85
UBXN1-216ENST00000533908 LIMD2Q9BT23 127 aa9.72□□□□□ -0.85
UBXN1-216ENST00000533908 HSPB8Q9UJY1 196 aa9.71□□□□□ -0.86
UBXN1-216ENST00000533908 E9PLD3 99 aa9.7□□□□□ -0.86
UBXN1-216ENST00000533908 HINT1P49773 126 aaPredicted RBP9.7□□□□□ -0.86
UBXN1-216ENST00000533908 KRTAP10-6P60371 365 aaPredicted RBP9.7□□□□□ -0.86
UBXN1-216ENST00000533908 CFC1BP0CG36 223 aa9.69□□□□□ -0.86
UBXN1-216ENST00000533908 OR13C6PQ8NH95 151 aa9.69□□□□□ -0.86
UBXN1-216ENST00000533908 LINC00308Q8TCZ7 52 aa9.69□□□□□ -0.86
UBXN1-216ENST00000533908 DHRS4-AS1Q9P1J3 65 aa9.68□□□□□ -0.86
UBXN1-216ENST00000533908 LAMTOR3Q9UHA4 124 aa9.68□□□□□ -0.86
UBXN1-216ENST00000533908 SLC25A34Q6PIV7 304 aa9.67□□□□□ -0.86
UBXN1-216ENST00000533908 SPANXCQ9NY87 97 aa9.67□□□□□ -0.86
UBXN1-216ENST00000533908 H7C2G1 150 aa9.66□□□□□ -0.86
UBXN1-216ENST00000533908 Q1RN00 199 aa9.66□□□□□ -0.86
UBXN1-216ENST00000533908 DEFB105AQ8NG35 78 aa9.65□□□□□ -0.86
UBXN1-216ENST00000533908 CBY1Q9Y3M2 126 aa9.65□□□□□ -0.86
UBXN1-216ENST00000533908 A0A0G2JQZ4 141 aa9.64□□□□□ -0.87
UBXN1-216ENST00000533908 ELOF1P60002 83 aaKnown RBP9.64□□□□□ -0.87
UBXN1-216ENST00000533908 CD164Q04900 197 aa9.64□□□□□ -0.87
UBXN1-216ENST00000533908 COX7BP24311 80 aa9.63□□□□□ -0.87
UBXN1-216ENST00000533908 TAL2Q16559 108 aa9.63□□□□□ -0.87
UBXN1-216ENST00000533908 C6orf99Q4VX62 202 aa9.63□□□□□ -0.87
UBXN1-216ENST00000533908 C1orf195Q5TG92 126 aa9.63□□□□□ -0.87
UBXN1-216ENST00000533908 SMIM29Q86T20 159 aa9.63□□□□□ -0.87
UBXN1-216ENST00000533908 SPANXDQ9BXN6 97 aa9.63□□□□□ -0.87
UBXN1-216ENST00000533908 PRO1933Q9H354 126 aa9.62□□□□□ -0.87
UBXN1-216ENST00000533908 TIMM17BO60830 172 aa9.61□□□□□ -0.87
UBXN1-216ENST00000533908 TTTY13Q9BZ97 58 aa9.61□□□□□ -0.87
UBXN1-216ENST00000533908 Q5XG85 94 aa9.6□□□□□ -0.87
UBXN1-216ENST00000533908 TEX49A0A1B0GTD5 131 aa9.59□□□□□ -0.87
UBXN1-216ENST00000533908 COLCA2A8K830 154 aa9.58□□□□□ -0.88
UBXN1-216ENST00000533908 SYS1-DBNDD2H3BUS1 97 aa9.58□□□□□ -0.88
UBXN1-216ENST00000533908 RPL37P61927 97 aaKnown RBP9.58□□□□□ -0.88
UBXN1-216ENST00000533908 AKR1D1P51857 326 aa9.57□□□□□ -0.88
UBXN1-216ENST00000533908 M0R2T5 61 aa9.56□□□□□ -0.88
UBXN1-216ENST00000533908 ZNF815PA8K554 130 aa9.55□□□□□ -0.88
UBXN1-216ENST00000533908 LINC00518Q8N0U6 118 aa9.55□□□□□ -0.88
UBXN1-216ENST00000533908 IGLV5-48A0A075B6I7 105 aa9.54□□□□□ -0.88
UBXN1-216ENST00000533908 LINC01545Q5VT33 79 aa9.54□□□□□ -0.88
UBXN1-216ENST00000533908 TRBV7-6A0A0J9YX20 115 aa9.53□□□□□ -0.88
UBXN1-216ENST00000533908 FLGP20930 4061 aaPredicted RBP9.53□□□□□ -0.88
UBXN1-216ENST00000533908 COX6B2Q6YFQ2 88 aa9.51□□□□□ -0.89
UBXN1-216ENST00000533908 A0A1B0GWB2 263 aa9.49□□□□□ -0.89
UBXN1-216ENST00000533908 PET117Q6UWS5 81 aa9.48□□□□□ -0.89
UBXN1-216ENST00000533908 A6NDN8 102 aa9.46□□□□□ -0.9
UBXN1-216ENST00000533908 HIST1H2BKO60814 126 aa9.46□□□□□ -0.9
UBXN1-216ENST00000533908 HIST1H2BJP06899 126 aa9.46□□□□□ -0.9
UBXN1-216ENST00000533908 HIST1H2BOP23527 126 aa9.46□□□□□ -0.9
UBXN1-216ENST00000533908 HIST1H2BBP33778 126 aa9.46□□□□□ -0.9
UBXN1-216ENST00000533908 HIST1H2BDP58876 126 aa9.46□□□□□ -0.9
UBXN1-216ENST00000533908 HIST1H2BCP62807 126 aa9.46□□□□□ -0.9
UBXN1-216ENST00000533908 HIST2H2BEQ16778 126 aa9.46□□□□□ -0.9
UBXN1-216ENST00000533908 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.46□□□□□ -0.9
UBXN1-216ENST00000533908 HIST1H2BHQ93079 126 aa9.46□□□□□ -0.9
UBXN1-216ENST00000533908 HIST1H2BNQ99877 126 aa9.46□□□□□ -0.9
UBXN1-216ENST00000533908 HIST1H2BMQ99879 126 aa9.46□□□□□ -0.9
UBXN1-216ENST00000533908 C3orf79P0CE67 100 aa9.45□□□□□ -0.9
UBXN1-216ENST00000533908 SLC7A5P1Q8MH63 180 aa9.45□□□□□ -0.9
UBXN1-216ENST00000533908 ANKRD39Q53RE8 183 aa9.42□□□□□ -0.9
UBXN1-216ENST00000533908 SCGB1D4Q6XE38 83 aa9.42□□□□□ -0.9
UBXN1-216ENST00000533908 MUSTN1Q8IVN3 82 aa9.42□□□□□ -0.9
UBXN1-216ENST00000533908 TCL1BO95988 128 aa9.41□□□□□ -0.9
UBXN1-216ENST00000533908 SMIM11BQ8TCY0 68 aa9.41□□□□□ -0.9
UBXN1-216ENST00000533908 IFITM1P13164 125 aa9.4□□□□□ -0.9
UBXN1-216ENST00000533908 A4D1N5 150 aa9.39□□□□□ -0.91
UBXN1-216ENST00000533908 PCP2Q8IVA1 136 aa9.37□□□□□ -0.91
UBXN1-216ENST00000533908 KRTDAPP60985 99 aa9.36□□□□□ -0.91
UBXN1-216ENST00000533908 Q6Q795 121 aa9.35□□□□□ -0.91
UBXN1-216ENST00000533908 Q6ZVH6 145 aa9.35□□□□□ -0.91
UBXN1-216ENST00000533908 COPS9Q8WXC6 57 aa9.35□□□□□ -0.91
UBXN1-216ENST00000533908 NHP2Q9NX24 153 aaKnown RBP9.35□□□□□ -0.91
UBXN1-216ENST00000533908 ATOH7Q8N100 152 aa9.34□□□□□ -0.91
UBXN1-216ENST00000533908 TRAV13-2A0A0B4J235 113 aa9.33□□□□□ -0.92
UBXN1-216ENST00000533908 OBSCN-AS1Q96MR7 158 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms