RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ESRGQ1W209 222 aa12.86□□□□□ -0.35
CAPN1-226ENST00000533820 COX7BP24311 80 aa12.85□□□□□ -0.35
CAPN1-226ENST00000533820 Q6ZRU5 148 aa12.85□□□□□ -0.35
CAPN1-226ENST00000533820 MAST4O15021 2626 aa12.85□□□□□ -0.35
CAPN1-226ENST00000533820 KPRPQ5T749 579 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-226ENST00000533820 NDUFC1O43677 76 aa12.84□□□□□ -0.35
CAPN1-226ENST00000533820 MUC7Q8TAX7 377 aa12.84□□□□□ -0.35
CAPN1-226ENST00000533820 OXLD1Q5BKU9 147 aa12.84□□□□□ -0.35
CAPN1-226ENST00000533820 PRR15Q8IV56 129 aa12.83□□□□□ -0.36
CAPN1-226ENST00000533820 LOC110117498A0A087WWA1 95 aa12.83□□□□□ -0.36
CAPN1-226ENST00000533820 TMEM254Q8TBM7 123 aa12.83□□□□□ -0.36
CAPN1-226ENST00000533820 TRBV7-4A0A0J9YYF1 115 aa12.82□□□□□ -0.36
CAPN1-226ENST00000533820 PSPHP1O15172 72 aa12.82□□□□□ -0.36
CAPN1-226ENST00000533820 Q6ZTC4 211 aa12.82□□□□□ -0.36
CAPN1-226ENST00000533820 ATP5EP56381 51 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-226ENST00000533820 BAHCC1Q9P281 2608 aa12.81□□□□□ -0.36
CAPN1-226ENST00000533820 CD164Q04900 197 aa12.8□□□□□ -0.36
CAPN1-226ENST00000533820 NREPQ16612 68 aa12.8□□□□□ -0.36
CAPN1-226ENST00000533820 VPREB1P12018 145 aa12.8□□□□□ -0.36
CAPN1-226ENST00000533820 GVQW2A0A096LPI5 108 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-226ENST00000533820 FUSP35637 526 aaKnown RBP eCLIP12.79□□□□□ -0.36
CAPN1-226ENST00000533820 DEFB105AQ8NG35 78 aa12.79□□□□□ -0.36
CAPN1-226ENST00000533820 IGKV2D-24A0A075B6R9 120 aa12.78□□□□□ -0.36
CAPN1-226ENST00000533820 BCE1O60756 84 aa12.78□□□□□ -0.36
CAPN1-226ENST00000533820 Q8N9L7 120 aa12.78□□□□□ -0.36
CAPN1-226ENST00000533820 FBN1P35555 2871 aaKnown RBP12.78□□□□□ -0.36
CAPN1-226ENST00000533820 ELOF1P60002 83 aaKnown RBP12.77□□□□□ -0.37
CAPN1-226ENST00000533820 C15orf56Q8N910 161 aa12.76□□□□□ -0.37
CAPN1-226ENST00000533820 A8MU10 97 aa12.75□□□□□ -0.37
CAPN1-226ENST00000533820 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-226ENST00000533820 Q6ZRP5 223 aa12.75□□□□□ -0.37
CAPN1-226ENST00000533820 PRB2P02812 416 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-226ENST00000533820 M0R378 163 aa12.73□□□□□ -0.37
CAPN1-226ENST00000533820 MRPL55Q7Z7F7 128 aaKnown RBP12.73□□□□□ -0.37
CAPN1-226ENST00000533820 EGFEM1PQ0D2K5 195 aa12.73□□□□□ -0.37
CAPN1-226ENST00000533820 PRYO14603 147 aa12.72□□□□□ -0.37
CAPN1-226ENST00000533820 KRTAP26-1Q6PEX3 210 aa12.72□□□□□ -0.37
CAPN1-226ENST00000533820 BPY2O14599 106 aa12.71□□□□□ -0.37
CAPN1-226ENST00000533820 C3orf84H3BNL1 204 aa12.71□□□□□ -0.38
CAPN1-226ENST00000533820 PDE6GP18545 87 aa12.7□□□□□ -0.38
CAPN1-226ENST00000533820 HIGD2AQ9BW72 106 aa12.7□□□□□ -0.38
CAPN1-226ENST00000533820 LINC00528Q8N1L1 170 aa12.69□□□□□ -0.38
CAPN1-226ENST00000533820 KRTAP10-11P60412 298 aa12.68□□□□□ -0.38
CAPN1-226ENST00000533820 RPL37AP8A6NKH3 93 aa12.68□□□□□ -0.38
CAPN1-226ENST00000533820 COL6A5A8TX70 2615 aa12.67□□□□□ -0.38
CAPN1-226ENST00000533820 SERTAD4-AS1Q5TG53 156 aa12.67□□□□□ -0.38
CAPN1-226ENST00000533820 CXCL6P80162 114 aa12.66□□□□□ -0.38
CAPN1-226ENST00000533820 NKAPP1Q8N9T2 125 aa12.66□□□□□ -0.38
CAPN1-226ENST00000533820 SYCNQ0VAF6 134 aa12.65□□□□□ -0.38
CAPN1-226ENST00000533820 DEFB131BA0A096LNP1 70 aa12.63□□□□□ -0.39
CAPN1-226ENST00000533820 RBM12B-AS1Q9P1G2 102 aa12.63□□□□□ -0.39
CAPN1-226ENST00000533820 ANK2Q01484 3957 aa12.62□□□□□ -0.39
CAPN1-226ENST00000533820 FAM168BA1KXE4 195 aa12.62□□□□□ -0.39
CAPN1-226ENST00000533820 H3BQ85 93 aa12.62□□□□□ -0.39
CAPN1-226ENST00000533820 PRR4Q16378 134 aa12.62□□□□□ -0.39
CAPN1-226ENST00000533820 C7orf33Q8WU49 177 aa12.62□□□□□ -0.39
CAPN1-226ENST00000533820 NBEAL1Q6ZS30 2694 aa12.61□□□□□ -0.39
CAPN1-226ENST00000533820 hDV103S1A0JD37 113 aa12.59□□□□□ -0.39
CAPN1-226ENST00000533820 CASC10Q5T4H9 136 aa12.59□□□□□ -0.39
CAPN1-226ENST00000533820 C4orf48Q5BLP8 95 aa12.58□□□□□ -0.39
CAPN1-226ENST00000533820 TRAV22A0A0B4J277 110 aa12.58□□□□□ -0.4
CAPN1-226ENST00000533820 C1orf64Q8NEQ6 169 aa12.58□□□□□ -0.4
CAPN1-226ENST00000533820 C11orf45Q8TAV5 145 aa12.57□□□□□ -0.4
CAPN1-226ENST00000533820 A8MUN3 132 aa12.57□□□□□ -0.4
CAPN1-226ENST00000533820 Q8N377 158 aa12.56□□□□□ -0.4
CAPN1-226ENST00000533820 SPTSSBQ8NFR3 76 aa12.56□□□□□ -0.4
CAPN1-226ENST00000533820 ST20-AS1Q8NBB2 130 aa12.55□□□□□ -0.4
CAPN1-226ENST00000533820 LINC01556Q5JQF7 62 aa12.55□□□□□ -0.4
CAPN1-226ENST00000533820 H3BNG1 76 aa12.54□□□□□ -0.4
CAPN1-226ENST00000533820 Q1T7F1 81 aa12.54□□□□□ -0.4
CAPN1-226ENST00000533820 IGKV4-1P06312 121 aa12.52□□□□□ -0.4
CAPN1-226ENST00000533820 KCNQ1DNQ9H478 68 aa12.52□□□□□ -0.41
CAPN1-226ENST00000533820 FAM30AQ9NZY2 134 aa12.52□□□□□ -0.41
CAPN1-226ENST00000533820 OCR1Q9BZK8 76 aa12.51□□□□□ -0.41
CAPN1-226ENST00000533820 ERC2-IT1O76042 136 aa12.49□□□□□ -0.41
CAPN1-226ENST00000533820 Q9BRP9 147 aa12.49□□□□□ -0.41
CAPN1-226ENST00000533820 ETDCA0A1B0GVM5 59 aa12.49□□□□□ -0.41
CAPN1-226ENST00000533820 A0A0G2JQZ4 141 aa12.48□□□□□ -0.41
CAPN1-226ENST00000533820 A0A1W2PNN7 141 aa12.48□□□□□ -0.41
CAPN1-226ENST00000533820 KTN1-AS1Q86SY8 53 aa12.48□□□□□ -0.41
CAPN1-226ENST00000533820 Q6ZRX8 168 aa12.46□□□□□ -0.42
CAPN1-226ENST00000533820 A0A1W2PNM2 257 aa12.45□□□□□ -0.42
CAPN1-226ENST00000533820 UBE2BP63146 152 aa12.45□□□□□ -0.42
CAPN1-226ENST00000533820 LINC00588Q9Y4M8 146 aa12.44□□□□□ -0.42
CAPN1-226ENST00000533820 MGAM2Q2M2H8 2515 aa12.44□□□□□ -0.42
CAPN1-226ENST00000533820 SRRM2Q9UQ35 2752 aaKnown RBP12.44□□□□□ -0.42
CAPN1-226ENST00000533820 C1orf137Q5JT78 98 aa12.43□□□□□ -0.42
CAPN1-226ENST00000533820 KRTAP7-1Q8IUC3 87 aa12.43□□□□□ -0.42
CAPN1-226ENST00000533820 DNAH10OSP0CZ25 163 aa12.42□□□□□ -0.42
CAPN1-226ENST00000533820 IGLV1-50A0A075B6I6 118 aa12.41□□□□□ -0.42
CAPN1-226ENST00000533820 CHKB-CPT1BH3BT56 60 aa12.41□□□□□ -0.42
CAPN1-226ENST00000533820 SMIM29Q86T20 159 aa12.41□□□□□ -0.42
CAPN1-226ENST00000533820 IGLV5-48A0A075B6I7 105 aa12.4□□□□□ -0.42
CAPN1-226ENST00000533820 KRTAP24-1Q3LI83 254 aa12.4□□□□□ -0.42
CAPN1-226ENST00000533820 DHRS4-AS1Q9P1J3 65 aa12.4□□□□□ -0.42
CAPN1-226ENST00000533820 STAB2Q8WWQ8 2551 aa12.4□□□□□ -0.42
CAPN1-226ENST00000533820 C16orf90A8MZG2 172 aa12.38□□□□□ -0.43
CAPN1-226ENST00000533820 TENM2Q9NT68 2774 aa12.38□□□□□ -0.43
CAPN1-226ENST00000533820 IGKV2-24A0A0C4DH68 120 aa12.37□□□□□ -0.43
CAPN1-226ENST00000533820 DEFB116Q30KQ4 102 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms