RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 NDUFA12Q9UI09 145 aa6.16□□□□□ -1.42
CAPN1-225ENST00000533704 NCR3O14931 201 aa6.15□□□□□ -1.42
CAPN1-225ENST00000533704 MIR7-3HGQ8N6C7 128 aa6.15□□□□□ -1.42
CAPN1-225ENST00000533704 HIGD2AQ9BW72 106 aa6.15□□□□□ -1.42
CAPN1-225ENST00000533704 IGKV2D-26A0A0A0MRZ7 120 aa6.14□□□□□ -1.43
CAPN1-225ENST00000533704 MYMXA0A1B0GTQ4 84 aa6.14□□□□□ -1.43
CAPN1-225ENST00000533704 K7EP34 96 aa6.14□□□□□ -1.43
CAPN1-225ENST00000533704 COX8AP10176 69 aa6.14□□□□□ -1.43
CAPN1-225ENST00000533704 SMCPP49901 116 aaPredicted RBP6.14□□□□□ -1.43
CAPN1-225ENST00000533704 HERV-K104P63124 156 aa6.14□□□□□ -1.43
CAPN1-225ENST00000533704 KRTAP13-2Q52LG2 175 aa6.14□□□□□ -1.43
CAPN1-225ENST00000533704 LPAP08519 4548 aa6.13□□□□□ -1.43
CAPN1-225ENST00000533704 A0A1B0GV72 72 aa6.13□□□□□ -1.43
CAPN1-225ENST00000533704 C9orf118A6NHY6 69 aa6.13□□□□□ -1.43
CAPN1-225ENST00000533704 TSPEAR-AS2P59090 65 aa6.13□□□□□ -1.43
CAPN1-225ENST00000533704 HSD52Q0P140 79 aa6.13□□□□□ -1.43
CAPN1-225ENST00000533704 FAM229BQ4G0N7 80 aa6.13□□□□□ -1.43
CAPN1-225ENST00000533704 J3QR89 54 aa6.12□□□□□ -1.43
CAPN1-225ENST00000533704 LEPROTO15243 131 aa6.12□□□□□ -1.43
CAPN1-225ENST00000533704 DPM2O94777 84 aa6.12□□□□□ -1.43
CAPN1-225ENST00000533704 PLNP26678 52 aa6.12□□□□□ -1.43
CAPN1-225ENST00000533704 HERVK_113P61574 105 aa6.12□□□□□ -1.43
CAPN1-225ENST00000533704 DAND5Q8N907 189 aa6.12□□□□□ -1.43
CAPN1-225ENST00000533704 PLEKHB2Q96CS7 222 aa6.12□□□□□ -1.43
CAPN1-225ENST00000533704 LGALS3P17931 250 aaKnown RBP6.11□□□□□ -1.43
CAPN1-225ENST00000533704 LINC01545Q5VT33 79 aa6.11□□□□□ -1.43
CAPN1-225ENST00000533704 LINC00304Q8N9R0 145 aa6.11□□□□□ -1.43
CAPN1-225ENST00000533704 RNF213Q63HN8 5207 aa6.1□□□□□ -1.43
CAPN1-225ENST00000533704 TRBV10-3A0A0K0K1G6 114 aa6.1□□□□□ -1.43
CAPN1-225ENST00000533704 TMEM238LA0A1B0GVL6 79 aa6.1□□□□□ -1.43
CAPN1-225ENST00000533704 J3QQQ9 107 aa6.1□□□□□ -1.43
CAPN1-225ENST00000533704 PRYO14603 147 aa6.1□□□□□ -1.43
CAPN1-225ENST00000533704 IGKCP01834 107 aa6.1□□□□□ -1.43
CAPN1-225ENST00000533704 RETNLBQ9BQ08 111 aa6.1□□□□□ -1.43
CAPN1-225ENST00000533704 ETDCA0A1B0GVM5 59 aa6.09□□□□□ -1.43
CAPN1-225ENST00000533704 FABP2P12104 132 aa6.09□□□□□ -1.43
CAPN1-225ENST00000533704 C3orf22Q8N5N4 141 aa6.09□□□□□ -1.43
CAPN1-225ENST00000533704 SPCS1Q9Y6A9 102 aa6.09□□□□□ -1.43
CAPN1-225ENST00000533704 C2orf91Q6ZV80 131 aa6.08□□□□□ -1.44
CAPN1-225ENST00000533704 SPRR4Q96PI1 79 aa6.08□□□□□ -1.44
CAPN1-225ENST00000533704 A0A1W2PPM0 123 aa6.07□□□□□ -1.44
CAPN1-225ENST00000533704 H3BUT2 72 aa6.07□□□□□ -1.44
CAPN1-225ENST00000533704 NPC2P61916 151 aa6.07□□□□□ -1.44
CAPN1-225ENST00000533704 SMCR5Q8TEV8 140 aa6.07□□□□□ -1.44
CAPN1-225ENST00000533704 PPDPFQ9H3Y8 114 aa6.07□□□□□ -1.44
CAPN1-225ENST00000533704 KCNQ1DNQ9H478 68 aa6.07□□□□□ -1.44
CAPN1-225ENST00000533704 ZNF706Q9Y5V0 76 aaPredicted RBP6.07□□□□□ -1.44
CAPN1-225ENST00000533704 NMUP48645 174 aa6.06□□□□□ -1.44
CAPN1-225ENST00000533704 MTURNQ8N3F0 131 aa6.06□□□□□ -1.44
CAPN1-225ENST00000533704 LINC00337Q8N6G1 96 aa6.06□□□□□ -1.44
CAPN1-225ENST00000533704 SPRR1AP35321 89 aa6.05□□□□□ -1.44
CAPN1-225ENST00000533704 SIGMAR1Q99720 223 aa6.05□□□□□ -1.44
CAPN1-225ENST00000533704 S100A7L2Q5SY68 101 aa6.04□□□□□ -1.44
CAPN1-225ENST00000533704 SPANXB1Q9NS25 103 aaPredicted RBP6.04□□□□□ -1.44
CAPN1-225ENST00000533704 HIGD1BQ9P298 99 aa6.04□□□□□ -1.44
CAPN1-225ENST00000533704 LOC107984156A0A0G2JMH3 177 aa6.03□□□□□ -1.44
CAPN1-225ENST00000533704 A0A0J9YXY3 114 aa6.03□□□□□ -1.44
CAPN1-225ENST00000533704 TRBV10-2A0A0K0K1G8 114 aa6.03□□□□□ -1.44
CAPN1-225ENST00000533704 E9PLD3 99 aa6.03□□□□□ -1.44
CAPN1-225ENST00000533704 KRTAP4-16G5E9R7 235 aaPredicted RBP6.03□□□□□ -1.44
CAPN1-225ENST00000533704 C4orf48Q5BLP8 95 aa6.03□□□□□ -1.44
CAPN1-225ENST00000533704 GAGE2AQ6NT46 116 aa6.03□□□□□ -1.44
CAPN1-225ENST00000533704 ARL17AQ8IVW1 177 aa6.03□□□□□ -1.44
CAPN1-225ENST00000533704 B5MCH6 92 aa6.02□□□□□ -1.45
CAPN1-225ENST00000533704 ADAMTSL4-AS1Q5T5F5 129 aa6.02□□□□□ -1.45
CAPN1-225ENST00000533704 LCE2AQ5TA79 106 aaPredicted RBP6.02□□□□□ -1.45
CAPN1-225ENST00000533704 SOSTDC1Q6X4U4 206 aa6.02□□□□□ -1.45
CAPN1-225ENST00000533704 Q8NBF4 154 aa6.02□□□□□ -1.45
CAPN1-225ENST00000533704 IGLV7-46A0A075B6I9 117 aa6.01□□□□□ -1.45
CAPN1-225ENST00000533704 EIF4EBP3O60516 100 aaPredicted RBP6.01□□□□□ -1.45
CAPN1-225ENST00000533704 ERC2-IT1O76042 136 aa6.01□□□□□ -1.45
CAPN1-225ENST00000533704 TAL2Q16559 108 aa6.01□□□□□ -1.45
CAPN1-225ENST00000533704 RAB37Q96AX2 223 aa6.01□□□□□ -1.45
CAPN1-225ENST00000533704 TRAV23DV6A0A075B6W5 121 aa6□□□□□ -1.45
CAPN1-225ENST00000533704 IGLV9-49A0A0B4J1Y8 123 aa6□□□□□ -1.45
CAPN1-225ENST00000533704 F8W1H4 67 aa6□□□□□ -1.45
CAPN1-225ENST00000533704 NDUFC2O95298 119 aa6□□□□□ -1.45
CAPN1-225ENST00000533704 SPAG11AQ6PDA7 123 aa6□□□□□ -1.45
CAPN1-225ENST00000533704 Q6ZRX8 168 aa6□□□□□ -1.45
CAPN1-225ENST00000533704 ZNF815PA8K554 130 aa5.99□□□□□ -1.45
CAPN1-225ENST00000533704 IGLV6-57P01721 117 aa5.99□□□□□ -1.45
CAPN1-225ENST00000533704 LYRM7Q5U5X0 104 aa5.99□□□□□ -1.45
CAPN1-225ENST00000533704 OR13C6PQ8NH95 151 aa5.99□□□□□ -1.45
CAPN1-225ENST00000533704 Q9BRP9 147 aa5.99□□□□□ -1.45
CAPN1-225ENST00000533704 CDIP1Q9H305 208 aa5.99□□□□□ -1.45
CAPN1-225ENST00000533704 MOBPQ13875 183 aa5.98□□□□□ -1.45
CAPN1-225ENST00000533704 LINC00483Q53H64 154 aa5.98□□□□□ -1.45
CAPN1-225ENST00000533704 TTTY13Q9BZ97 58 aa5.98□□□□□ -1.45
CAPN1-225ENST00000533704 ZNF73O43830 326 aaPredicted RBP5.97□□□□□ -1.45
CAPN1-225ENST00000533704 CEND1Q8N111 149 aa5.97□□□□□ -1.45
CAPN1-225ENST00000533704 LINC00308Q8TCZ7 52 aa5.97□□□□□ -1.45
CAPN1-225ENST00000533704 NAA38Q9BRA0 125 aaKnown RBP5.97□□□□□ -1.45
CAPN1-225ENST00000533704 LITAFQ99732 161 aa5.96□□□□□ -1.46
CAPN1-225ENST00000533704 NHP2Q9NX24 153 aaKnown RBP5.96□□□□□ -1.46
CAPN1-225ENST00000533704 SPANXCQ9NY87 97 aa5.96□□□□□ -1.46
CAPN1-225ENST00000533704 TIMM17BO60830 172 aa5.95□□□□□ -1.46
CAPN1-225ENST00000533704 TPRXLQ17RH7 258 aa5.95□□□□□ -1.46
CAPN1-225ENST00000533704 C9orf153Q5TBE3 101 aa5.95□□□□□ -1.46
CAPN1-225ENST00000533704 A6NJY4 79 aa5.94□□□□□ -1.46
CAPN1-225ENST00000533704 FXYD2P54710 66 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms