RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 NOTCH1P46531 2555 aa11.85□□□□□ -0.51
UBXN1-213ENST00000532904 Q6ZRU5 148 aa11.85□□□□□ -0.51
UBXN1-213ENST00000532904 LINC00528Q8N1L1 170 aa11.85□□□□□ -0.51
UBXN1-213ENST00000532904 H7BZZ5 65 aa11.83□□□□□ -0.51
UBXN1-213ENST00000532904 PRB2P02812 416 aaPredicted RBP11.83□□□□□ -0.51
UBXN1-213ENST00000532904 KLKP1Q107X0 134 aa11.83□□□□□ -0.51
UBXN1-213ENST00000532904 ESRGQ1W209 222 aa11.83□□□□□ -0.51
UBXN1-213ENST00000532904 FAM236DA0A1B0GTK5 79 aa11.83□□□□□ -0.52
UBXN1-213ENST00000532904 FAM236CP0DP71 79 aa11.83□□□□□ -0.52
UBXN1-213ENST00000532904 C15orf56Q8N910 161 aa11.83□□□□□ -0.52
UBXN1-213ENST00000532904 SCXQ7RTU7 201 aa11.8□□□□□ -0.52
UBXN1-213ENST00000532904 NBEAL1Q6ZS30 2694 aa11.8□□□□□ -0.52
UBXN1-213ENST00000532904 LINC01556Q5JQF7 62 aa11.79□□□□□ -0.52
UBXN1-213ENST00000532904 Q5XG85 94 aa11.79□□□□□ -0.52
UBXN1-213ENST00000532904 EPM2AB3EWF7 344 aa11.77□□□□□ -0.52
UBXN1-213ENST00000532904 MRAPQ8TCY5 172 aa11.77□□□□□ -0.53
UBXN1-213ENST00000532904 MDFIQ99750 246 aa11.77□□□□□ -0.53
UBXN1-213ENST00000532904 F8WDY8 70 aa11.76□□□□□ -0.53
UBXN1-213ENST00000532904 Q6ZRP5 223 aa11.76□□□□□ -0.53
UBXN1-213ENST00000532904 SERP1Q9Y6X1 66 aa11.75□□□□□ -0.53
UBXN1-213ENST00000532904 RMI2Q96E14 147 aa11.75□□□□□ -0.53
UBXN1-213ENST00000532904 SNURFQ9Y675 71 aa11.75□□□□□ -0.53
UBXN1-213ENST00000532904 DNAH10OSP0CZ25 163 aa11.74□□□□□ -0.53
UBXN1-213ENST00000532904 C1orf43Q9BWL3 253 aa11.74□□□□□ -0.53
UBXN1-213ENST00000532904 C4orf26Q17RF5 130 aa11.73□□□□□ -0.53
UBXN1-213ENST00000532904 MGAM2Q2M2H8 2515 aa11.72□□□□□ -0.53
UBXN1-213ENST00000532904 KCNQ1DNQ9H478 68 aa11.72□□□□□ -0.53
UBXN1-213ENST00000532904 SYCNQ0VAF6 134 aa11.71□□□□□ -0.53
UBXN1-213ENST00000532904 F8WEM9 126 aa11.7□□□□□ -0.54
UBXN1-213ENST00000532904 BPY2O14599 106 aa11.7□□□□□ -0.54
UBXN1-213ENST00000532904 NDUFC1O43677 76 aa11.7□□□□□ -0.54
UBXN1-213ENST00000532904 NREPQ16612 68 aa11.7□□□□□ -0.54
UBXN1-213ENST00000532904 IGKV4-1P06312 121 aa11.69□□□□□ -0.54
UBXN1-213ENST00000532904 HUWE1Q7Z6Z7 4374 aaKnown RBP11.69□□□□□ -0.54
UBXN1-213ENST00000532904 IGKV2D-24A0A075B6R9 120 aa11.69□□□□□ -0.54
UBXN1-213ENST00000532904 ERC2-IT1O76042 136 aa11.68□□□□□ -0.54
UBXN1-213ENST00000532904 NKAPP1Q8N9T2 125 aa11.68□□□□□ -0.54
UBXN1-213ENST00000532904 SERTAD4-AS1Q5TG53 156 aa11.67□□□□□ -0.54
UBXN1-213ENST00000532904 Q8N377 158 aa11.67□□□□□ -0.54
UBXN1-213ENST00000532904 C7orf33Q8WU49 177 aa11.67□□□□□ -0.54
UBXN1-213ENST00000532904 LINC00588Q9Y4M8 146 aa11.67□□□□□ -0.54
UBXN1-213ENST00000532904 HRCT1Q6UXD1 115 aa11.66□□□□□ -0.54
UBXN1-213ENST00000532904 Q8N9L7 120 aa11.66□□□□□ -0.54
UBXN1-213ENST00000532904 IGLV5-48A0A075B6I7 105 aa11.65□□□□□ -0.54
UBXN1-213ENST00000532904 B9D2Q9BPU9 175 aa11.64□□□□□ -0.55
UBXN1-213ENST00000532904 DEFB105AQ8NG35 78 aa11.63□□□□□ -0.55
UBXN1-213ENST00000532904 TMEM254Q8TBM7 123 aa11.63□□□□□ -0.55
UBXN1-213ENST00000532904 PLA2G2DQ9UNK4 145 aa11.63□□□□□ -0.55
UBXN1-213ENST00000532904 C3orf84H3BNL1 204 aa11.63□□□□□ -0.55
UBXN1-213ENST00000532904 TLX1NBP0CAT3 122 aa11.63□□□□□ -0.55
UBXN1-213ENST00000532904 ATP5EP56381 51 aaPredicted RBP11.63□□□□□ -0.55
UBXN1-213ENST00000532904 DHRS4-AS1Q9P1J3 65 aa11.62□□□□□ -0.55
UBXN1-213ENST00000532904 OCR1Q9BZK8 76 aa11.61□□□□□ -0.55
UBXN1-213ENST00000532904 A0A1B0GW54 56 aa11.6□□□□□ -0.55
UBXN1-213ENST00000532904 Q6ZRX8 168 aa11.59□□□□□ -0.55
UBXN1-213ENST00000532904 KRTAP4-16G5E9R7 235 aaPredicted RBP11.59□□□□□ -0.55
UBXN1-213ENST00000532904 IGLV5-37A0A075B6J1 123 aa11.58□□□□□ -0.56
UBXN1-213ENST00000532904 PRYO14603 147 aa11.58□□□□□ -0.56
UBXN1-213ENST00000532904 SMIM26A0A096LP01 95 aa11.57□□□□□ -0.56
UBXN1-213ENST00000532904 Q9BRP9 147 aa11.57□□□□□ -0.56
UBXN1-213ENST00000532904 A0A0U1RQV1 116 aa11.56□□□□□ -0.56
UBXN1-213ENST00000532904 SPRR1AP35321 89 aa11.56□□□□□ -0.56
UBXN1-213ENST00000532904 FUSP35637 526 aaKnown RBP eCLIP11.56□□□□□ -0.56
UBXN1-213ENST00000532904 IGLV1-50A0A075B6I6 118 aa11.56□□□□□ -0.56
UBXN1-213ENST00000532904 TNP2Q05952 138 aa11.56□□□□□ -0.56
UBXN1-213ENST00000532904 A0A1W2PNM2 257 aa11.55□□□□□ -0.56
UBXN1-213ENST00000532904 RPL37AP8A6NKH3 93 aa11.55□□□□□ -0.56
UBXN1-213ENST00000532904 ETDCA0A1B0GVM5 59 aa11.53□□□□□ -0.56
UBXN1-213ENST00000532904 DNAH9Q9NYC9 4486 aa11.53□□□□□ -0.56
UBXN1-213ENST00000532904 FAM168BA1KXE4 195 aa11.53□□□□□ -0.56
UBXN1-213ENST00000532904 FP248Q71RG6 208 aaPredicted RBP11.53□□□□□ -0.56
UBXN1-213ENST00000532904 C1orf137Q5JT78 98 aa11.52□□□□□ -0.57
UBXN1-213ENST00000532904 KRTAP7-1Q8IUC3 87 aa11.51□□□□□ -0.57
UBXN1-213ENST00000532904 Q8NBF4 154 aa11.51□□□□□ -0.57
UBXN1-213ENST00000532904 ST20-AS1Q8NBB2 130 aa11.5□□□□□ -0.57
UBXN1-213ENST00000532904 APLNQ9ULZ1 77 aa11.5□□□□□ -0.57
UBXN1-213ENST00000532904 STAB2Q8WWQ8 2551 aa11.5□□□□□ -0.57
UBXN1-213ENST00000532904 SPRR4Q96PI1 79 aa11.49□□□□□ -0.57
UBXN1-213ENST00000532904 CASC10Q5T4H9 136 aa11.48□□□□□ -0.57
UBXN1-213ENST00000532904 SMIM29Q86T20 159 aa11.47□□□□□ -0.57
UBXN1-213ENST00000532904 COL7A1Q02388 2944 aa11.47□□□□□ -0.57
UBXN1-213ENST00000532904 HIGD2AQ9BW72 106 aa11.47□□□□□ -0.57
UBXN1-213ENST00000532904 MRPL55Q7Z7F7 128 aaKnown RBP11.46□□□□□ -0.57
UBXN1-213ENST00000532904 LCE6AA0A183 80 aa11.45□□□□□ -0.58
UBXN1-213ENST00000532904 LINC00474Q9P2X8 69 aa11.45□□□□□ -0.58
UBXN1-213ENST00000532904 FAM30AQ9NZY2 134 aa11.44□□□□□ -0.58
UBXN1-213ENST00000532904 DNAH1Q9P2D7 4330 aa11.43□□□□□ -0.58
UBXN1-213ENST00000532904 NUPR2A6NF83 97 aa11.43□□□□□ -0.58
UBXN1-213ENST00000532904 DSCR10P59022 87 aa11.43□□□□□ -0.58
UBXN1-213ENST00000532904 DYNC2H1Q8NCM8 4307 aaKnown RBP11.43□□□□□ -0.58
UBXN1-213ENST00000532904 UBE2DNLQ8IWF7 75 aa11.42□□□□□ -0.58
UBXN1-213ENST00000532904 UBE2BP63146 152 aa11.42□□□□□ -0.58
UBXN1-213ENST00000532904 LINC00336Q6ZUF6 198 aa11.41□□□□□ -0.58
UBXN1-213ENST00000532904 REG3GQ6UW15 175 aa11.39□□□□□ -0.59
UBXN1-213ENST00000532904 KRTAP1-5Q9BYS1 174 aa11.39□□□□□ -0.59
UBXN1-213ENST00000532904 FAM229BQ4G0N7 80 aa11.38□□□□□ -0.59
UBXN1-213ENST00000532904 K7EQZ3 153 aa11.37□□□□□ -0.59
UBXN1-213ENST00000532904 PRO0628Q9UI54 55 aa11.37□□□□□ -0.59
UBXN1-213ENST00000532904 LINC00476Q8WZB0 136 aa11.36□□□□□ -0.59
UBXN1-213ENST00000532904 ZCCHC13Q8WW36 166 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms