RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 C9orf92A6NGG3 77 aa11.41□□□□□ -0.58
FDFT1-220ENST00000531733 ZNF73O43830 326 aaPredicted RBP11.41□□□□□ -0.58
FDFT1-220ENST00000531733 LINC00310P59036 64 aa11.41□□□□□ -0.58
FDFT1-220ENST00000531733 HRCT1Q6UXD1 115 aa11.41□□□□□ -0.58
FDFT1-220ENST00000531733 JOSD1Q15040 202 aaPredicted RBP11.4□□□□□ -0.58
FDFT1-220ENST00000531733 ADAMTSL4-AS1Q5T5F5 129 aa11.4□□□□□ -0.58
FDFT1-220ENST00000531733 PMCHL2Q9BQD1 86 aa11.4□□□□□ -0.58
FDFT1-220ENST00000531733 MIEN1Q9BRT3 115 aa11.4□□□□□ -0.58
FDFT1-220ENST00000531733 SNAPINO95295 136 aa11.38□□□□□ -0.59
FDFT1-220ENST00000531733 LEPROTL1O95214 131 aa11.36□□□□□ -0.59
FDFT1-220ENST00000531733 PLNP26678 52 aa11.36□□□□□ -0.59
FDFT1-220ENST00000531733 SVBPQ8N300 66 aa11.36□□□□□ -0.59
FDFT1-220ENST00000531733 LGALS3P17931 250 aaKnown RBP11.35□□□□□ -0.59
FDFT1-220ENST00000531733 LORP23490 312 aaPredicted RBP11.35□□□□□ -0.59
FDFT1-220ENST00000531733 NMUP48645 174 aa11.35□□□□□ -0.59
FDFT1-220ENST00000531733 SERF1AO75920 110 aa11.34□□□□□ -0.59
FDFT1-220ENST00000531733 SPRR1BP22528 89 aa11.34□□□□□ -0.59
FDFT1-220ENST00000531733 A0A0J9YXY3 114 aa11.33□□□□□ -0.6
FDFT1-220ENST00000531733 DPM2O94777 84 aa11.33□□□□□ -0.6
FDFT1-220ENST00000531733 KRTAP10-6P60371 365 aaPredicted RBP11.33□□□□□ -0.6
FDFT1-220ENST00000531733 C5orf52A6NGY3 159 aa11.32□□□□□ -0.6
FDFT1-220ENST00000531733 CFC1BP0CG36 223 aa11.32□□□□□ -0.6
FDFT1-220ENST00000531733 HERVK_113P61574 105 aa11.32□□□□□ -0.6
FDFT1-220ENST00000531733 IGKCP01834 107 aa11.31□□□□□ -0.6
FDFT1-220ENST00000531733 FABP4P15090 132 aa11.31□□□□□ -0.6
FDFT1-220ENST00000531733 LIMD2Q9BT23 127 aa11.31□□□□□ -0.6
FDFT1-220ENST00000531733 TRGC2P03986 189 aa11.3□□□□□ -0.6
FDFT1-220ENST00000531733 NDUFA5Q16718 116 aa11.3□□□□□ -0.6
FDFT1-220ENST00000531733 FLGP20930 4061 aaPredicted RBP11.3□□□□□ -0.6
FDFT1-220ENST00000531733 LITAFQ99732 161 aa11.27□□□□□ -0.61
FDFT1-220ENST00000531733 HINT1P49773 126 aaPredicted RBP11.26□□□□□ -0.61
FDFT1-220ENST00000531733 H7C2G1 150 aa11.25□□□□□ -0.61
FDFT1-220ENST00000531733 OR13C6PQ8NH95 151 aa11.25□□□□□ -0.61
FDFT1-220ENST00000531733 LAMTOR3Q9UHA4 124 aa11.25□□□□□ -0.61
FDFT1-220ENST00000531733 HSPB8Q9UJY1 196 aa11.25□□□□□ -0.61
FDFT1-220ENST00000531733 Q1RN00 199 aa11.24□□□□□ -0.61
FDFT1-220ENST00000531733 LINC00308Q8TCZ7 52 aa11.24□□□□□ -0.61
FDFT1-220ENST00000531733 DHRS4-AS1Q9P1J3 65 aa11.24□□□□□ -0.61
FDFT1-220ENST00000531733 E9PLD3 99 aa11.23□□□□□ -0.61
FDFT1-220ENST00000531733 SLC25A34Q6PIV7 304 aa11.23□□□□□ -0.61
FDFT1-220ENST00000531733 SPANXCQ9NY87 97 aa11.23□□□□□ -0.61
FDFT1-220ENST00000531733 A0A0G2JQZ4 141 aa11.21□□□□□ -0.61
FDFT1-220ENST00000531733 DEFB105AQ8NG35 78 aa11.21□□□□□ -0.61
FDFT1-220ENST00000531733 ELOF1P60002 83 aaKnown RBP11.2□□□□□ -0.62
FDFT1-220ENST00000531733 C1orf195Q5TG92 126 aa11.19□□□□□ -0.62
FDFT1-220ENST00000531733 CBY1Q9Y3M2 126 aa11.19□□□□□ -0.62
FDFT1-220ENST00000531733 COX7BP24311 80 aa11.18□□□□□ -0.62
FDFT1-220ENST00000531733 CD164Q04900 197 aa11.18□□□□□ -0.62
FDFT1-220ENST00000531733 C6orf99Q4VX62 202 aa11.18□□□□□ -0.62
FDFT1-220ENST00000531733 SMIM29Q86T20 159 aa11.18□□□□□ -0.62
FDFT1-220ENST00000531733 M0R2T5 61 aa11.17□□□□□ -0.62
FDFT1-220ENST00000531733 TAL2Q16559 108 aa11.17□□□□□ -0.62
FDFT1-220ENST00000531733 SLC7A5P1Q8MH63 180 aa11.17□□□□□ -0.62
FDFT1-220ENST00000531733 SPANXDQ9BXN6 97 aa11.17□□□□□ -0.62
FDFT1-220ENST00000531733 PRO1933Q9H354 126 aa11.17□□□□□ -0.62
FDFT1-220ENST00000531733 RPL37P61927 97 aaKnown RBP11.16□□□□□ -0.62
FDFT1-220ENST00000531733 TTTY13Q9BZ97 58 aa11.15□□□□□ -0.62
FDFT1-220ENST00000531733 Q5XG85 94 aa11.14□□□□□ -0.63
FDFT1-220ENST00000531733 TEX49A0A1B0GTD5 131 aa11.13□□□□□ -0.63
FDFT1-220ENST00000531733 TIMM17BO60830 172 aa11.13□□□□□ -0.63
FDFT1-220ENST00000531733 COX6B2Q6YFQ2 88 aa11.11□□□□□ -0.63
FDFT1-220ENST00000531733 AKR1D1P51857 326 aa11.1□□□□□ -0.63
FDFT1-220ENST00000531733 ZNF815PA8K554 130 aa11.09□□□□□ -0.63
FDFT1-220ENST00000531733 SYS1-DBNDD2H3BUS1 97 aa11.09□□□□□ -0.63
FDFT1-220ENST00000531733 IGLV5-48A0A075B6I7 105 aa11.06□□□□□ -0.64
FDFT1-220ENST00000531733 COLCA2A8K830 154 aa11.06□□□□□ -0.64
FDFT1-220ENST00000531733 LINC00518Q8N0U6 118 aa11.06□□□□□ -0.64
FDFT1-220ENST00000531733 LINC01545Q5VT33 79 aa11.04□□□□□ -0.64
FDFT1-220ENST00000531733 TRBV7-6A0A0J9YX20 115 aa11.03□□□□□ -0.64
FDFT1-220ENST00000531733 A0A1B0GWB2 263 aa11.01□□□□□ -0.65
FDFT1-220ENST00000531733 USH2AO75445 5202 aa10.97□□□□□ -0.65
FDFT1-220ENST00000531733 PET117Q6UWS5 81 aa10.97□□□□□ -0.65
FDFT1-220ENST00000531733 A6NDN8 102 aa10.96□□□□□ -0.65
FDFT1-220ENST00000531733 SSPOA2VEC9 5147 aa10.96□□□□□ -0.66
FDFT1-220ENST00000531733 HIST1H2BKO60814 126 aa10.95□□□□□ -0.66
FDFT1-220ENST00000531733 HIST1H2BJP06899 126 aa10.95□□□□□ -0.66
FDFT1-220ENST00000531733 HIST1H2BOP23527 126 aa10.95□□□□□ -0.66
FDFT1-220ENST00000531733 HIST1H2BBP33778 126 aa10.95□□□□□ -0.66
FDFT1-220ENST00000531733 HIST1H2BDP58876 126 aa10.95□□□□□ -0.66
FDFT1-220ENST00000531733 HIST1H2BCP62807 126 aa10.95□□□□□ -0.66
FDFT1-220ENST00000531733 HIST2H2BEQ16778 126 aa10.95□□□□□ -0.66
FDFT1-220ENST00000531733 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.95□□□□□ -0.66
FDFT1-220ENST00000531733 HIST1H2BHQ93079 126 aa10.95□□□□□ -0.66
FDFT1-220ENST00000531733 HIST1H2BNQ99877 126 aa10.95□□□□□ -0.66
FDFT1-220ENST00000531733 HIST1H2BMQ99879 126 aa10.95□□□□□ -0.66
FDFT1-220ENST00000531733 TCL1BO95988 128 aa10.93□□□□□ -0.66
FDFT1-220ENST00000531733 C3orf79P0CE67 100 aa10.93□□□□□ -0.66
FDFT1-220ENST00000531733 SCGB1D4Q6XE38 83 aa10.93□□□□□ -0.66
FDFT1-220ENST00000531733 S100A1P23297 94 aa10.92□□□□□ -0.66
FDFT1-220ENST00000531733 Q6Q795 121 aa10.92□□□□□ -0.66
FDFT1-220ENST00000531733 MUSTN1Q8IVN3 82 aa10.92□□□□□ -0.66
FDFT1-220ENST00000531733 ANKRD39Q53RE8 183 aa10.91□□□□□ -0.66
FDFT1-220ENST00000531733 SMIM11BQ8TCY0 68 aa10.91□□□□□ -0.66
FDFT1-220ENST00000531733 IFITM1P13164 125 aa10.89□□□□□ -0.67
FDFT1-220ENST00000531733 A4D1N5 150 aa10.88□□□□□ -0.67
FDFT1-220ENST00000531733 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.87□□□□□ -0.67
FDFT1-220ENST00000531733 PCP2Q8IVA1 136 aa10.87□□□□□ -0.67
FDFT1-220ENST00000531733 OBSCN-AS1Q96MR7 158 aa10.86□□□□□ -0.67
FDFT1-220ENST00000531733 KRTDAPP60985 99 aa10.85□□□□□ -0.67
FDFT1-220ENST00000531733 NHP2Q9NX24 153 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms