RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 TPRXLQ17RH7 258 aa12.82□□□□□ -0.36
TRAPPC4-210ENST00000531290 C4orf48Q5BLP8 95 aa12.82□□□□□ -0.36
TRAPPC4-210ENST00000531290 HIST3H2BBQ8N257 126 aa12.81□□□□□ -0.36
TRAPPC4-210ENST00000531290 SPRR1AP35321 89 aa12.8□□□□□ -0.36
TRAPPC4-210ENST00000531290 SCGB1D4Q6XE38 83 aa12.8□□□□□ -0.36
TRAPPC4-210ENST00000531290 ATOH7Q8N100 152 aa12.8□□□□□ -0.36
TRAPPC4-210ENST00000531290 SMCR5Q8TEV8 140 aa12.8□□□□□ -0.36
TRAPPC4-210ENST00000531290 SNRPEP62304 92 aaKnown RBP12.79□□□□□ -0.36
TRAPPC4-210ENST00000531290 HIST1H2BLQ99880 126 aa12.78□□□□□ -0.36
TRAPPC4-210ENST00000531290 CBY1Q9Y3M2 126 aa12.78□□□□□ -0.36
TRAPPC4-210ENST00000531290 LINC00308Q8TCZ7 52 aa12.77□□□□□ -0.37
TRAPPC4-210ENST00000531290 TTTY13Q9BZ97 58 aa12.77□□□□□ -0.37
TRAPPC4-210ENST00000531290 PPDPFQ9H3Y8 114 aa12.77□□□□□ -0.37
TRAPPC4-210ENST00000531290 SOSTDC1Q6X4U4 206 aa12.76□□□□□ -0.37
TRAPPC4-210ENST00000531290 LITAFQ99732 161 aa12.76□□□□□ -0.37
TRAPPC4-210ENST00000531290 KRTAP4-16G5E9R7 235 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-210ENST00000531290 ANKRD39Q53RE8 183 aa12.75□□□□□ -0.37
TRAPPC4-210ENST00000531290 SPANXCQ9NY87 97 aa12.75□□□□□ -0.37
TRAPPC4-210ENST00000531290 HSBP1L1C9JCN9 74 aa12.74□□□□□ -0.37
TRAPPC4-210ENST00000531290 Q8NBF4 154 aa12.74□□□□□ -0.37
TRAPPC4-210ENST00000531290 COPS9Q8WXC6 57 aa12.74□□□□□ -0.37
TRAPPC4-210ENST00000531290 MUC17Q685J3 4493 aa12.74□□□□□ -0.37
TRAPPC4-210ENST00000531290 EIF4EBP3O60516 100 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-210ENST00000531290 IGLV6-57P01721 117 aa12.72□□□□□ -0.37
TRAPPC4-210ENST00000531290 OR13C6PQ8NH95 151 aa12.72□□□□□ -0.37
TRAPPC4-210ENST00000531290 TRAV23DV6A0A075B6W5 121 aa12.71□□□□□ -0.37
TRAPPC4-210ENST00000531290 FP248Q71RG6 208 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-210ENST00000531290 B5MCH6 92 aa12.7□□□□□ -0.38
TRAPPC4-210ENST00000531290 HINT1P49773 126 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC4-210ENST00000531290 GAGE2AQ6NT46 116 aa12.7□□□□□ -0.38
TRAPPC4-210ENST00000531290 LINC00518Q8N0U6 118 aa12.7□□□□□ -0.38
TRAPPC4-210ENST00000531290 JOSD1Q15040 202 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC4-210ENST00000531290 LINC00483Q53H64 154 aa12.69□□□□□ -0.38
TRAPPC4-210ENST00000531290 FAT4Q6V0I7 4981 aa12.68□□□□□ -0.38
TRAPPC4-210ENST00000531290 SPINK1P00995 79 aa12.68□□□□□ -0.38
TRAPPC4-210ENST00000531290 Q6ZVH6 145 aa12.68□□□□□ -0.38
TRAPPC4-210ENST00000531290 SPANXDQ9BXN6 97 aa12.68□□□□□ -0.38
TRAPPC4-210ENST00000531290 ZNF73O43830 326 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-210ENST00000531290 PCP2Q8IVA1 136 aa12.67□□□□□ -0.38
TRAPPC4-210ENST00000531290 SCGB1D1O95968 90 aa12.66□□□□□ -0.38
TRAPPC4-210ENST00000531290 IFITM1P13164 125 aa12.66□□□□□ -0.38
TRAPPC4-210ENST00000531290 ERC2-IT1O76042 136 aa12.65□□□□□ -0.38
TRAPPC4-210ENST00000531290 Q6ZRX8 168 aa12.65□□□□□ -0.38
TRAPPC4-210ENST00000531290 IGLV9-49A0A0B4J1Y8 123 aa12.63□□□□□ -0.39
TRAPPC4-210ENST00000531290 C5orf52A6NGY3 159 aa12.63□□□□□ -0.39
TRAPPC4-210ENST00000531290 MOBPQ13875 183 aa12.62□□□□□ -0.39
TRAPPC4-210ENST00000531290 SSBP3-AS1Q7Z2R9 100 aa12.62□□□□□ -0.39
TRAPPC4-210ENST00000531290 Q9BRP9 147 aa12.62□□□□□ -0.39
TRAPPC4-210ENST00000531290 MUSTN1Q8IVN3 82 aa12.59□□□□□ -0.39
TRAPPC4-210ENST00000531290 A6NDN8 102 aa12.57□□□□□ -0.4
TRAPPC4-210ENST00000531290 KRTAP13-3Q3SY46 172 aa12.57□□□□□ -0.4
TRAPPC4-210ENST00000531290 LCE2AQ5TA79 106 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC4-210ENST00000531290 RPS29P62273 56 aaKnown RBP12.55□□□□□ -0.4
TRAPPC4-210ENST00000531290 DHRS4-AS1Q9P1J3 65 aa12.53□□□□□ -0.4
TRAPPC4-210ENST00000531290 SLC25A20O43772 301 aa12.52□□□□□ -0.41
TRAPPC4-210ENST00000531290 COX7BP24311 80 aa12.52□□□□□ -0.41
TRAPPC4-210ENST00000531290 C6orf99Q4VX62 202 aa12.52□□□□□ -0.41
TRAPPC4-210ENST00000531290 Q8N377 158 aa12.52□□□□□ -0.41
TRAPPC4-210ENST00000531290 TRAV13-2A0A0B4J235 113 aa12.51□□□□□ -0.41
TRAPPC4-210ENST00000531290 C9orf153Q5TBE3 101 aa12.51□□□□□ -0.41
TRAPPC4-210ENST00000531290 ASB16-AS1Q495Z4 193 aa12.49□□□□□ -0.41
TRAPPC4-210ENST00000531290 ST20-AS1Q8NBB2 130 aa12.48□□□□□ -0.41
TRAPPC4-210ENST00000531290 TRBV7-6A0A0J9YX20 115 aa12.47□□□□□ -0.41
TRAPPC4-210ENST00000531290 ELOF1P60002 83 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-210ENST00000531290 KRTAP9-2Q9BYQ4 174 aa12.47□□□□□ -0.41
TRAPPC4-210ENST00000531290 COX8AP10176 69 aa12.46□□□□□ -0.41
TRAPPC4-210ENST00000531290 SEC61BP60468 96 aaKnown RBP12.46□□□□□ -0.41
TRAPPC4-210ENST00000531290 SLC25A34Q6PIV7 304 aa12.45□□□□□ -0.42
TRAPPC4-210ENST00000531290 HIST1H4GQ99525 98 aa12.45□□□□□ -0.42
TRAPPC4-210ENST00000531290 A0A1B0GWB2 263 aa12.44□□□□□ -0.42
TRAPPC4-210ENST00000531290 VAMP8Q9BV40 100 aa12.43□□□□□ -0.42
TRAPPC4-210ENST00000531290 A4D1N5 150 aa12.42□□□□□ -0.42
TRAPPC4-210ENST00000531290 PAM16Q9Y3D7 125 aa12.42□□□□□ -0.42
TRAPPC4-210ENST00000531290 DLEU1O43261 78 aa12.41□□□□□ -0.42
TRAPPC4-210ENST00000531290 VAMP3Q15836 100 aa12.41□□□□□ -0.42
TRAPPC4-210ENST00000531290 TAL2Q16559 108 aa12.41□□□□□ -0.42
TRAPPC4-210ENST00000531290 SPATA45Q537H7 98 aa12.41□□□□□ -0.42
TRAPPC4-210ENST00000531290 SMIM11BQ8TCY0 68 aa12.39□□□□□ -0.43
TRAPPC4-210ENST00000531290 C14orf144Q96I85 54 aa12.39□□□□□ -0.43
TRAPPC4-210ENST00000531290 NHP2Q9NX24 153 aaKnown RBP12.38□□□□□ -0.43
TRAPPC4-210ENST00000531290 LAMTOR3Q9UHA4 124 aa12.38□□□□□ -0.43
TRAPPC4-210ENST00000531290 SPRR1BP22528 89 aa12.37□□□□□ -0.43
TRAPPC4-210ENST00000531290 DEFB105AQ8NG35 78 aa12.37□□□□□ -0.43
TRAPPC4-210ENST00000531290 LINC01547P58512 204 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-210ENST00000531290 TMA7Q9Y2S6 64 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-210ENST00000531290 TEX49A0A1B0GTD5 131 aa12.33□□□□□ -0.44
TRAPPC4-210ENST00000531290 XP32Q5T750 250 aa12.33□□□□□ -0.44
TRAPPC4-210ENST00000531290 HRCT1Q6UXD1 115 aa12.33□□□□□ -0.44
TRAPPC4-210ENST00000531290 LIMD2Q9BT23 127 aa12.33□□□□□ -0.44
TRAPPC4-210ENST00000531290 C12orf57Q99622 126 aa12.32□□□□□ -0.44
TRAPPC4-210ENST00000531290 KRTAP4-1Q9BYQ7 146 aa12.32□□□□□ -0.44
TRAPPC4-210ENST00000531290 HIGD1BQ9P298 99 aa12.32□□□□□ -0.44
TRAPPC4-210ENST00000531290 Q1RN00 199 aa12.28□□□□□ -0.44
TRAPPC4-210ENST00000531290 RAB37Q96AX2 223 aa12.28□□□□□ -0.44
TRAPPC4-210ENST00000531290 BVES-AS1Q5T3Y7 98 aa12.25□□□□□ -0.45
TRAPPC4-210ENST00000531290 PRO1933Q9H354 126 aa12.25□□□□□ -0.45
TRAPPC4-210ENST00000531290 IGLV5-48A0A075B6I7 105 aa12.24□□□□□ -0.45
TRAPPC4-210ENST00000531290 LINC00575Q6W349 94 aa12.24□□□□□ -0.45
TRAPPC4-210ENST00000531290 hADV29S1A0JD25 119 aa12.23□□□□□ -0.45
TRAPPC4-210ENST00000531290 H7C2G1 150 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms