RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 IGKV2D-24A0A075B6R9 120 aa5.27□□□□□ -1.57
CSDE1-214ENST00000530886 CNBPP62633 177 aaKnown RBP5.27□□□□□ -1.57
CSDE1-214ENST00000530886 KRTAP29-1A8MX34 341 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-214ENST00000530886 SPTA1P02549 2419 aa5.27□□□□□ -1.57
CSDE1-214ENST00000530886 KMT2BQ9UMN6 2715 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-214ENST00000530886 KHDC1LQ5JSQ8 128 aa5.27□□□□□ -1.57
CSDE1-214ENST00000530886 Q6YL49 198 aa5.27□□□□□ -1.57
CSDE1-214ENST00000530886 IGLV7-46A0A075B6I9 117 aa5.26□□□□□ -1.57
CSDE1-214ENST00000530886 C1orf137Q5JT78 98 aa5.26□□□□□ -1.57
CSDE1-214ENST00000530886 COA5Q86WW8 74 aa5.26□□□□□ -1.57
CSDE1-214ENST00000530886 PRR34Q9NV39 138 aa5.26□□□□□ -1.57
CSDE1-214ENST00000530886 PRO0255Q9UI72 69 aa5.26□□□□□ -1.57
CSDE1-214ENST00000530886 IGLV10-54A0A075B6I4 117 aa5.25□□□□□ -1.57
CSDE1-214ENST00000530886 B4DSR2 109 aa5.25□□□□□ -1.57
CSDE1-214ENST00000530886 H3BS24 57 aa5.25□□□□□ -1.57
CSDE1-214ENST00000530886 ANGP03950 147 aaKnown RBP5.25□□□□□ -1.57
CSDE1-214ENST00000530886 EGFEM1PQ0D2K5 195 aa5.25□□□□□ -1.57
CSDE1-214ENST00000530886 XAGE1AQ9HD64 81 aa5.25□□□□□ -1.57
CSDE1-214ENST00000530886 DHRS4-AS1Q9P1J3 65 aa5.25□□□□□ -1.57
CSDE1-214ENST00000530886 ATRXP46100 2492 aa5.25□□□□□ -1.57
CSDE1-214ENST00000530886 GVINP1Q7Z2Y8 2422 aa5.25□□□□□ -1.57
CSDE1-214ENST00000530886 FLNCQ14315 2725 aa5.24□□□□□ -1.57
CSDE1-214ENST00000530886 WNK1Q9H4A3 2382 aa5.24□□□□□ -1.57
CSDE1-214ENST00000530886 H0Y9P7 68 aa5.24□□□□□ -1.57
CSDE1-214ENST00000530886 NCOR2Q9Y618 2525 aa5.23□□□□□ -1.57
CSDE1-214ENST00000530886 PLA2G1BP04054 148 aaKnown RBP5.23□□□□□ -1.57
CSDE1-214ENST00000530886 ALMS1Q8TCU4 4167 aa5.23□□□□□ -1.57
CSDE1-214ENST00000530886 CSPG4Q6UVK1 2322 aa5.23□□□□□ -1.57
CSDE1-214ENST00000530886 LINC01554Q52M75 96 aa5.22□□□□□ -1.57
CSDE1-214ENST00000530886 LINC00313P59037 77 aa5.21□□□□□ -1.57
CSDE1-214ENST00000530886 CASC2Q6XLA1 102 aa5.21□□□□□ -1.57
CSDE1-214ENST00000530886 C2CD3Q4AC94 2353 aa5.21□□□□□ -1.58
CSDE1-214ENST00000530886 PRB2P02812 416 aaPredicted RBP5.21□□□□□ -1.58
CSDE1-214ENST00000530886 PTPN13Q12923 2485 aa5.21□□□□□ -1.58
CSDE1-214ENST00000530886 KRTAP4-16G5E9R7 235 aaPredicted RBP5.21□□□□□ -1.58
CSDE1-214ENST00000530886 NBEAL2Q6ZNJ1 2754 aa5.2□□□□□ -1.58
CSDE1-214ENST00000530886 Q6ZRX8 168 aa5.2□□□□□ -1.58
CSDE1-214ENST00000530886 CMYA5Q8N3K9 4069 aa5.2□□□□□ -1.58
CSDE1-214ENST00000530886 SPRR1AP35321 89 aa5.2□□□□□ -1.58
CSDE1-214ENST00000530886 C7orf33Q8WU49 177 aa5.2□□□□□ -1.58
CSDE1-214ENST00000530886 DEFB130BP0DP73 79 aa5.19□□□□□ -1.58
CSDE1-214ENST00000530886 DEFB130AP0DP74 79 aa5.19□□□□□ -1.58
CSDE1-214ENST00000530886 DEFB105AQ8NG35 78 aa5.19□□□□□ -1.58
CSDE1-214ENST00000530886 PLA2G2DQ9UNK4 145 aa5.19□□□□□ -1.58
CSDE1-214ENST00000530886 ZFHX2Q9C0A1 2572 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-214ENST00000530886 SPINK7P58062 85 aa5.18□□□□□ -1.58
CSDE1-214ENST00000530886 LELP1Q5T871 98 aa5.18□□□□□ -1.58
CSDE1-214ENST00000530886 TENM2Q9NT68 2774 aa5.18□□□□□ -1.58
CSDE1-214ENST00000530886 NBASA2RRP1 2371 aa5.18□□□□□ -1.58
CSDE1-214ENST00000530886 IGLV5-37A0A075B6J1 123 aa5.18□□□□□ -1.58
CSDE1-214ENST00000530886 CCL19Q99731 98 aa5.17□□□□□ -1.58
CSDE1-214ENST00000530886 JMJD1CQ15652 2540 aa5.17□□□□□ -1.58
CSDE1-214ENST00000530886 VWFP04275 2813 aa5.17□□□□□ -1.58
CSDE1-214ENST00000530886 WFDC13Q8IUB5 93 aa5.17□□□□□ -1.58
CSDE1-214ENST00000530886 CAMK2N2Q96S95 79 aa5.17□□□□□ -1.58
CSDE1-214ENST00000530886 GCN1Q92616 2671 aaKnown RBP5.17□□□□□ -1.58
CSDE1-214ENST00000530886 IGLV8-61A0A075B6I0 122 aa5.17□□□□□ -1.58
CSDE1-214ENST00000530886 A0A096LPF7 62 aa5.17□□□□□ -1.58
CSDE1-214ENST00000530886 KRTAP26-1Q6PEX3 210 aa5.16□□□□□ -1.58
CSDE1-214ENST00000530886 CREBBPQ92793 2442 aa5.16□□□□□ -1.58
CSDE1-214ENST00000530886 PRR26Q8N8Z3 221 aa5.16□□□□□ -1.58
CSDE1-214ENST00000530886 IGLV1-51P01701 117 aa5.16□□□□□ -1.58
CSDE1-214ENST00000530886 X6R8D5 127 aa5.16□□□□□ -1.58
CSDE1-214ENST00000530886 TTC28Q96AY4 2481 aa5.15□□□□□ -1.58
CSDE1-214ENST00000530886 TLN2Q9Y4G6 2542 aa5.15□□□□□ -1.58
CSDE1-214ENST00000530886 DNAH10Q8IVF4 4471 aa5.15□□□□□ -1.59
CSDE1-214ENST00000530886 Q8NAQ8 132 aa5.15□□□□□ -1.59
CSDE1-214ENST00000530886 DNAH3Q8TD57 4116 aa5.15□□□□□ -1.59
CSDE1-214ENST00000530886 ANKRD17O75179 2603 aaKnown RBP5.14□□□□□ -1.59
CSDE1-214ENST00000530886 WFDC10BQ8IUB3 73 aa5.14□□□□□ -1.59
CSDE1-214ENST00000530886 SPAG11AQ6PDA7 123 aa5.14□□□□□ -1.59
CSDE1-214ENST00000530886 LINC00476Q8WZB0 136 aa5.14□□□□□ -1.59
CSDE1-214ENST00000530886 CENPEQ02224 2701 aa5.14□□□□□ -1.59
CSDE1-214ENST00000530886 IGF2RP11717 2491 aa5.14□□□□□ -1.59
CSDE1-214ENST00000530886 IGLV1-50A0A075B6I6 118 aa5.13□□□□□ -1.59
CSDE1-214ENST00000530886 RTL8CO15255 209 aa5.13□□□□□ -1.59
CSDE1-214ENST00000530886 DEFB116Q30KQ4 102 aa5.13□□□□□ -1.59
CSDE1-214ENST00000530886 C15orf56Q8N910 161 aa5.13□□□□□ -1.59
CSDE1-214ENST00000530886 EPG5Q9HCE0 2579 aa5.12□□□□□ -1.59
CSDE1-214ENST00000530886 A8MWP4 228 aa5.12□□□□□ -1.59
CSDE1-214ENST00000530886 IGFL1Q6UW32 110 aa5.12□□□□□ -1.59
CSDE1-214ENST00000530886 PRAC1Q96KF2 57 aa5.12□□□□□ -1.59
CSDE1-214ENST00000530886 DNAJC9-AS1A6NH13 148 aa5.12□□□□□ -1.59
CSDE1-214ENST00000530886 TLX1NBP0CAT3 122 aa5.12□□□□□ -1.59
CSDE1-214ENST00000530886 DNAH9Q9NYC9 4486 aa5.12□□□□□ -1.59
CSDE1-214ENST00000530886 USP9XQ93008 2570 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-214ENST00000530886 RIF1Q5UIP0 2472 aaKnown RBP5.12□□□□□ -1.59
CSDE1-214ENST00000530886 HIVEP1P15822 2718 aa5.12□□□□□ -1.59
CSDE1-214ENST00000530886 PKD1L1Q8TDX9 2849 aa5.11□□□□□ -1.59
CSDE1-214ENST00000530886 SERTAD4-AS1Q5TG53 156 aa5.11□□□□□ -1.59
CSDE1-214ENST00000530886 Q6ZR54 194 aa5.11□□□□□ -1.59
CSDE1-214ENST00000530886 DEFB131BA0A096LNP1 70 aa5.1□□□□□ -1.59
CSDE1-214ENST00000530886 TP53AIP1Q9HCN2 124 aa5.1□□□□□ -1.59
CSDE1-214ENST00000530886 MYO9AB2RTY4 2548 aa5.1□□□□□ -1.59
CSDE1-214ENST00000530886 HRES1P13985 223 aa5.1□□□□□ -1.59
CSDE1-214ENST00000530886 UBR5O95071 2799 aaPredicted RBP5.1□□□□□ -1.59
CSDE1-214ENST00000530886 RPL37AP8A6NKH3 93 aa5.09□□□□□ -1.59
CSDE1-214ENST00000530886 LINC00472Q9H8W2 130 aa5.09□□□□□ -1.6
CSDE1-214ENST00000530886 DOPEY1Q5JWR5 2465 aa5.08□□□□□ -1.6
CSDE1-214ENST00000530886 MAPK1IP1LQ8NDC0 245 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms