RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 HERC1Q15751 4861 aa7.77□□□□□ -1.17
USF1-208ENST00000528768 PKD1P98161 4303 aa7.76□□□□□ -1.17
USF1-208ENST00000528768 TRAV23DV6A0A075B6W5 121 aa7.76□□□□□ -1.17
USF1-208ENST00000528768 TRBV7-6A0A0J9YX20 115 aa7.76□□□□□ -1.17
USF1-208ENST00000528768 hADV29S1A0JD25 119 aa7.76□□□□□ -1.17
USF1-208ENST00000528768 LINC00575Q6W349 94 aa7.76□□□□□ -1.17
USF1-208ENST00000528768 A0A1B0GV72 72 aa7.75□□□□□ -1.17
USF1-208ENST00000528768 HSPG2P98160 4391 aa7.74□□□□□ -1.17
USF1-208ENST00000528768 GAGE2AQ6NT46 116 aa7.74□□□□□ -1.17
USF1-208ENST00000528768 LINC00643Q86TS7 51 aa7.74□□□□□ -1.17
USF1-208ENST00000528768 Q8N1X5 172 aa7.74□□□□□ -1.17
USF1-208ENST00000528768 OBSCN-AS1Q96MR7 158 aa7.74□□□□□ -1.17
USF1-208ENST00000528768 XAGE1AQ9HD64 81 aa7.74□□□□□ -1.17
USF1-208ENST00000528768 VPREB1P12018 145 aa7.73□□□□□ -1.17
USF1-208ENST00000528768 COX7BP24311 80 aa7.73□□□□□ -1.17
USF1-208ENST00000528768 TTC32Q5I0X7 151 aa7.73□□□□□ -1.17
USF1-208ENST00000528768 TRBV10-3A0A0K0K1G6 114 aa7.72□□□□□ -1.17
USF1-208ENST00000528768 SLPIP03973 132 aa7.72□□□□□ -1.17
USF1-208ENST00000528768 TLX1NBP0CAT3 122 aa7.72□□□□□ -1.17
USF1-208ENST00000528768 NKAPP1Q8N9T2 125 aa7.72□□□□□ -1.17
USF1-208ENST00000528768 IMUPQ9GZP8 106 aa7.72□□□□□ -1.17
USF1-208ENST00000528768 C22orf24Q9Y442 160 aa7.72□□□□□ -1.17
USF1-208ENST00000528768 ZNF73O43830 326 aaPredicted RBP7.71□□□□□ -1.18
USF1-208ENST00000528768 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.71□□□□□ -1.18
USF1-208ENST00000528768 UBE2DNLQ8IWF7 75 aa7.71□□□□□ -1.18
USF1-208ENST00000528768 Q8NDZ9 215 aa7.71□□□□□ -1.18
USF1-208ENST00000528768 C16orf90A8MZG2 172 aa7.7□□□□□ -1.18
USF1-208ENST00000528768 USP17L23D6RBM5 183 aa7.7□□□□□ -1.18
USF1-208ENST00000528768 C14orf132Q9NPU4 83 aa7.7□□□□□ -1.18
USF1-208ENST00000528768 PLA2G2DQ9UNK4 145 aa7.7□□□□□ -1.18
USF1-208ENST00000528768 M0R2N4 97 aa7.69□□□□□ -1.18
USF1-208ENST00000528768 PDE6GP18545 87 aa7.69□□□□□ -1.18
USF1-208ENST00000528768 TRBV7-7A0A0K0K1E9 115 aa7.68□□□□□ -1.18
USF1-208ENST00000528768 CCKP06307 115 aa7.68□□□□□ -1.18
USF1-208ENST00000528768 Q6ZR54 194 aa7.68□□□□□ -1.18
USF1-208ENST00000528768 Q6ZRP5 223 aa7.68□□□□□ -1.18
USF1-208ENST00000528768 ELOF1P60002 83 aaKnown RBP7.67□□□□□ -1.18
USF1-208ENST00000528768 C1orf134Q5TEV5 83 aa7.67□□□□□ -1.18
USF1-208ENST00000528768 LAMTOR3Q9UHA4 124 aa7.67□□□□□ -1.18
USF1-208ENST00000528768 LOC107984640A0A0U1RRK4 108 aa7.66□□□□□ -1.18
USF1-208ENST00000528768 RBM3P98179 157 aaKnown RBP7.66□□□□□ -1.18
USF1-208ENST00000528768 C14orf177Q52M58 125 aa7.66□□□□□ -1.18
USF1-208ENST00000528768 SDIM1Q6ZPB5 146 aa7.66□□□□□ -1.18
USF1-208ENST00000528768 ANAPC13Q9BS18 74 aa7.66□□□□□ -1.18
USF1-208ENST00000528768 PKIGQ9Y2B9 76 aa7.66□□□□□ -1.18
USF1-208ENST00000528768 Q6ZQY7 126 aa7.65□□□□□ -1.18
USF1-208ENST00000528768 IGLV5-37A0A075B6J1 123 aa7.64□□□□□ -1.19
USF1-208ENST00000528768 PSCAO43653 123 aa7.64□□□□□ -1.19
USF1-208ENST00000528768 DSCR8Q96T75 97 aa7.64□□□□□ -1.19
USF1-208ENST00000528768 LOC110117498A0A087WWA1 95 aa7.63□□□□□ -1.19
USF1-208ENST00000528768 NDUFV3P56181 108 aaKnown RBP7.63□□□□□ -1.19
USF1-208ENST00000528768 C9orf129Q5T035 196 aaKnown RBP7.63□□□□□ -1.19
USF1-208ENST00000528768 Q6JHZ5 121 aa7.63□□□□□ -1.19
USF1-208ENST00000528768 KCNQ1DNQ9H478 68 aa7.63□□□□□ -1.19
USF1-208ENST00000528768 PRYO14603 147 aa7.62□□□□□ -1.19
USF1-208ENST00000528768 ATP5EP2Q5VTU8 51 aa7.62□□□□□ -1.19
USF1-208ENST00000528768 LINC00528Q8N1L1 170 aa7.61□□□□□ -1.19
USF1-208ENST00000528768 C7orf33Q8WU49 177 aa7.61□□□□□ -1.19
USF1-208ENST00000528768 UBL5Q9BZL1 73 aa7.61□□□□□ -1.19
USF1-208ENST00000528768 DHRS4-AS1Q9P1J3 65 aa7.61□□□□□ -1.19
USF1-208ENST00000528768 EPM2AB3EWF7 344 aa7.6□□□□□ -1.19
USF1-208ENST00000528768 SMCR5Q8TEV8 140 aa7.6□□□□□ -1.19
USF1-208ENST00000528768 ETDCA0A1B0GVM5 59 aa7.59□□□□□ -1.19
USF1-208ENST00000528768 LINC00846Q9NV44 126 aa7.59□□□□□ -1.19
USF1-208ENST00000528768 APOBP04114 4563 aaKnown RBP7.59□□□□□ -1.2
USF1-208ENST00000528768 SRRM2Q9UQ35 2752 aaKnown RBP7.59□□□□□ -1.2
USF1-208ENST00000528768 TNP2Q05952 138 aa7.58□□□□□ -1.2
USF1-208ENST00000528768 SERTAD4-AS1Q5TG53 156 aa7.58□□□□□ -1.2
USF1-208ENST00000528768 LRP1BQ9NZR2 4599 aa7.58□□□□□ -1.2
USF1-208ENST00000528768 CNBPP62633 177 aaKnown RBP7.57□□□□□ -1.2
USF1-208ENST00000528768 Q6ZQT0 140 aa7.57□□□□□ -1.2
USF1-208ENST00000528768 IGLV1-50A0A075B6I6 118 aa7.56□□□□□ -1.2
USF1-208ENST00000528768 MRPL55Q7Z7F7 128 aaKnown RBP7.56□□□□□ -1.2
USF1-208ENST00000528768 FAM236AA0A1B0GUQ0 79 aa7.55□□□□□ -1.2
USF1-208ENST00000528768 FAM236BA0A1B0GV22 79 aa7.55□□□□□ -1.2
USF1-208ENST00000528768 SPRR1AP35321 89 aa7.53□□□□□ -1.2
USF1-208ENST00000528768 Q6ZRX8 168 aa7.53□□□□□ -1.2
USF1-208ENST00000528768 FAM19A5Q7Z5A7 132 aaPredicted RBP7.53□□□□□ -1.2
USF1-208ENST00000528768 DNAH5Q8TE73 4624 aa7.52□□□□□ -1.21
USF1-208ENST00000528768 IGKV3D-7A0A0C4DH55 119 aa7.52□□□□□ -1.21
USF1-208ENST00000528768 NBDYA0A0U1RRE5 68 aa7.52□□□□□ -1.21
USF1-208ENST00000528768 B5MCH6 92 aa7.52□□□□□ -1.21
USF1-208ENST00000528768 ATOX1O00244 68 aa7.52□□□□□ -1.21
USF1-208ENST00000528768 TRBV7-4A0A0J9YYF1 115 aa7.51□□□□□ -1.21
USF1-208ENST00000528768 RPL37AP8A6NKH3 93 aa7.51□□□□□ -1.21
USF1-208ENST00000528768 REG3GQ6UW15 175 aa7.51□□□□□ -1.21
USF1-208ENST00000528768 LINC00474Q9P2X8 69 aa7.51□□□□□ -1.21
USF1-208ENST00000528768 FAM168BA1KXE4 195 aa7.5□□□□□ -1.21
USF1-208ENST00000528768 KRTAP1-5Q9BYS1 174 aa7.5□□□□□ -1.21
USF1-208ENST00000528768 A0A1B0GW54 56 aa7.49□□□□□ -1.21
USF1-208ENST00000528768 UBE2BP63146 152 aa7.49□□□□□ -1.21
USF1-208ENST00000528768 KRTAP4-16G5E9R7 235 aaPredicted RBP7.48□□□□□ -1.21
USF1-208ENST00000528768 HIST1H4AP62805 103 aaKnown RBP7.48□□□□□ -1.21
USF1-208ENST00000528768 DEFB105AQ8NG35 78 aa7.48□□□□□ -1.21
USF1-208ENST00000528768 MYCBP2O75592 4640 aa7.48□□□□□ -1.21
USF1-208ENST00000528768 UBR4Q5T4S7 5183 aa7.47□□□□□ -1.21
USF1-208ENST00000528768 A0A096LNI7 61 aa7.47□□□□□ -1.21
USF1-208ENST00000528768 IGKV2-24A0A0C4DH68 120 aa7.47□□□□□ -1.21
USF1-208ENST00000528768 Q5VSD8 79 aa7.47□□□□□ -1.21
USF1-208ENST00000528768 J3QL48 77 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms