RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 MEGF8Q7Z7M0 2845 aa8.36□□□□□ -1.07
CAPN1-208ENST00000527323 H3BS24 57 aa8.36□□□□□ -1.07
CAPN1-208ENST00000527323 CAMK2N2Q96S95 79 aa8.36□□□□□ -1.07
CAPN1-208ENST00000527323 CXCL6P80162 114 aa8.35□□□□□ -1.07
CAPN1-208ENST00000527323 RMI2Q96E14 147 aa8.35□□□□□ -1.07
CAPN1-208ENST00000527323 PRR34Q9NV39 138 aa8.35□□□□□ -1.07
CAPN1-208ENST00000527323 BCE1O60756 84 aa8.35□□□□□ -1.07
CAPN1-208ENST00000527323 H7BZZ5 65 aa8.34□□□□□ -1.07
CAPN1-208ENST00000527323 MIFP14174 115 aa8.34□□□□□ -1.07
CAPN1-208ENST00000527323 Q8NAQ8 132 aa8.34□□□□□ -1.07
CAPN1-208ENST00000527323 GVQW2A0A096LPI5 108 aaPredicted RBP8.33□□□□□ -1.08
CAPN1-208ENST00000527323 Q5XG85 94 aa8.33□□□□□ -1.08
CAPN1-208ENST00000527323 LYSTQ99698 3801 aa8.33□□□□□ -1.08
CAPN1-208ENST00000527323 TRBV7-4A0A0J9YYF1 115 aa8.32□□□□□ -1.08
CAPN1-208ENST00000527323 ELOF1P60002 83 aaKnown RBP8.32□□□□□ -1.08
CAPN1-208ENST00000527323 F8WEM9 126 aa8.31□□□□□ -1.08
CAPN1-208ENST00000527323 TM2D3Q9BRN9 247 aa8.31□□□□□ -1.08
CAPN1-208ENST00000527323 SERP1Q9Y6X1 66 aa8.31□□□□□ -1.08
CAPN1-208ENST00000527323 M0R378 163 aa8.3□□□□□ -1.08
CAPN1-208ENST00000527323 KLKP1Q107X0 134 aa8.3□□□□□ -1.08
CAPN1-208ENST00000527323 VPREB1P12018 145 aa8.3□□□□□ -1.08
CAPN1-208ENST00000527323 A0A0A0MQY5 61 aa8.29□□□□□ -1.08
CAPN1-208ENST00000527323 Q6ZRU5 148 aa8.29□□□□□ -1.08
CAPN1-208ENST00000527323 WFDC10BQ8IUB3 73 aa8.29□□□□□ -1.08
CAPN1-208ENST00000527323 Q8N9L7 120 aa8.29□□□□□ -1.08
CAPN1-208ENST00000527323 DEFB105AQ8NG35 78 aa8.28□□□□□ -1.08
CAPN1-208ENST00000527323 K7EIL1 84 aa8.28□□□□□ -1.08
CAPN1-208ENST00000527323 EGFEM1PQ0D2K5 195 aa8.28□□□□□ -1.08
CAPN1-208ENST00000527323 NREPQ16612 68 aa8.28□□□□□ -1.08
CAPN1-208ENST00000527323 PRKDCP78527 4128 aaKnown RBP8.27□□□□□ -1.09
CAPN1-208ENST00000527323 TRBV7-6A0A0J9YX20 115 aa8.27□□□□□ -1.09
CAPN1-208ENST00000527323 BPY2O14599 106 aa8.27□□□□□ -1.09
CAPN1-208ENST00000527323 V9GYY9 64 aa8.27□□□□□ -1.09
CAPN1-208ENST00000527323 PLA2G2DQ9UNK4 145 aa8.26□□□□□ -1.09
CAPN1-208ENST00000527323 C3orf84H3BNL1 204 aa8.25□□□□□ -1.09
CAPN1-208ENST00000527323 LINC00528Q8N1L1 170 aa8.25□□□□□ -1.09
CAPN1-208ENST00000527323 KPRPQ5T749 579 aaPredicted RBP8.25□□□□□ -1.09
CAPN1-208ENST00000527323 Q6ZTC4 211 aa8.24□□□□□ -1.09
CAPN1-208ENST00000527323 HUWE1Q7Z6Z7 4374 aaKnown RBP8.23□□□□□ -1.09
CAPN1-208ENST00000527323 IGKV2D-24A0A075B6R9 120 aa8.23□□□□□ -1.09
CAPN1-208ENST00000527323 NDUFC1O43677 76 aa8.23□□□□□ -1.09
CAPN1-208ENST00000527323 TMEM254Q8TBM7 123 aa8.23□□□□□ -1.09
CAPN1-208ENST00000527323 Q6ZRP5 223 aa8.22□□□□□ -1.09
CAPN1-208ENST00000527323 NKAPP1Q8N9T2 125 aa8.22□□□□□ -1.09
CAPN1-208ENST00000527323 DNAH3Q8TD57 4116 aa8.22□□□□□ -1.09
CAPN1-208ENST00000527323 FBN3Q75N90 2809 aa8.22□□□□□ -1.09
CAPN1-208ENST00000527323 C15orf56Q8N910 161 aa8.21□□□□□ -1.09
CAPN1-208ENST00000527323 SMIM26A0A096LP01 95 aa8.21□□□□□ -1.1
CAPN1-208ENST00000527323 TNP2Q05952 138 aa8.2□□□□□ -1.1
CAPN1-208ENST00000527323 EPM2AB3EWF7 344 aa8.19□□□□□ -1.1
CAPN1-208ENST00000527323 IGKV4-1P06312 121 aa8.19□□□□□ -1.1
CAPN1-208ENST00000527323 SYCNQ0VAF6 134 aa8.19□□□□□ -1.1
CAPN1-208ENST00000527323 KRTAP26-1Q6PEX3 210 aa8.19□□□□□ -1.1
CAPN1-208ENST00000527323 ESRGQ1W209 222 aa8.18□□□□□ -1.1
CAPN1-208ENST00000527323 LINC00474Q9P2X8 69 aa8.17□□□□□ -1.1
CAPN1-208ENST00000527323 RPL37AP8A6NKH3 93 aa8.16□□□□□ -1.1
CAPN1-208ENST00000527323 Q8N377 158 aa8.16□□□□□ -1.1
CAPN1-208ENST00000527323 C7orf33Q8WU49 177 aa8.16□□□□□ -1.1
CAPN1-208ENST00000527323 FUSP35637 526 aaKnown RBP eCLIP8.16□□□□□ -1.1
CAPN1-208ENST00000527323 ATP5EP56381 51 aaPredicted RBP8.16□□□□□ -1.1
CAPN1-208ENST00000527323 LINC00336Q6ZUF6 198 aa8.16□□□□□ -1.1
CAPN1-208ENST00000527323 FP248Q71RG6 208 aaPredicted RBP8.16□□□□□ -1.1
CAPN1-208ENST00000527323 KCNQ1DNQ9H478 68 aa8.14□□□□□ -1.11
CAPN1-208ENST00000527323 PRYO14603 147 aa8.14□□□□□ -1.11
CAPN1-208ENST00000527323 ERC2-IT1O76042 136 aa8.14□□□□□ -1.11
CAPN1-208ENST00000527323 C11orf45Q8TAV5 145 aa8.14□□□□□ -1.11
CAPN1-208ENST00000527323 OCR1Q9BZK8 76 aa8.14□□□□□ -1.11
CAPN1-208ENST00000527323 DNAH9Q9NYC9 4486 aa8.14□□□□□ -1.11
CAPN1-208ENST00000527323 HIGD2AQ9BW72 106 aa8.14□□□□□ -1.11
CAPN1-208ENST00000527323 H3BNG1 76 aa8.13□□□□□ -1.11
CAPN1-208ENST00000527323 FAM30AQ9NZY2 134 aa8.13□□□□□ -1.11
CAPN1-208ENST00000527323 ETDCA0A1B0GVM5 59 aa8.12□□□□□ -1.11
CAPN1-208ENST00000527323 DNAH7Q8WXX0 4024 aa8.12□□□□□ -1.11
CAPN1-208ENST00000527323 A0A0U1RQV1 116 aa8.11□□□□□ -1.11
CAPN1-208ENST00000527323 MPLKIPQ8TAP9 179 aa8.11□□□□□ -1.11
CAPN1-208ENST00000527323 DEFB131BA0A096LNP1 70 aa8.11□□□□□ -1.11
CAPN1-208ENST00000527323 DHRS4-AS1Q9P1J3 65 aa8.11□□□□□ -1.11
CAPN1-208ENST00000527323 C1orf137Q5JT78 98 aa8.11□□□□□ -1.11
CAPN1-208ENST00000527323 IGLV5-48A0A075B6I7 105 aa8.1□□□□□ -1.11
CAPN1-208ENST00000527323 LINC01556Q5JQF7 62 aa8.1□□□□□ -1.11
CAPN1-208ENST00000527323 SMIM29Q86T20 159 aa8.1□□□□□ -1.11
CAPN1-208ENST00000527323 ST20-AS1Q8NBB2 130 aa8.1□□□□□ -1.11
CAPN1-208ENST00000527323 A0A1W2PNM2 257 aa8.09□□□□□ -1.11
CAPN1-208ENST00000527323 FAM168BA1KXE4 195 aa8.09□□□□□ -1.11
CAPN1-208ENST00000527323 PRO0628Q9UI54 55 aa8.09□□□□□ -1.11
CAPN1-208ENST00000527323 Q6ZRX8 168 aa8.09□□□□□ -1.12
CAPN1-208ENST00000527323 Q9BRP9 147 aa8.08□□□□□ -1.12
CAPN1-208ENST00000527323 PKIGQ9Y2B9 76 aa8.08□□□□□ -1.12
CAPN1-208ENST00000527323 FAM229BQ4G0N7 80 aa8.07□□□□□ -1.12
CAPN1-208ENST00000527323 UBE2BP63146 152 aa8.07□□□□□ -1.12
CAPN1-208ENST00000527323 PRR26Q8N8Z3 221 aa8.06□□□□□ -1.12
CAPN1-208ENST00000527323 BRK1Q8WUW1 75 aa8.06□□□□□ -1.12
CAPN1-208ENST00000527323 IGLV1-50A0A075B6I6 118 aa8.05□□□□□ -1.12
CAPN1-208ENST00000527323 Q8NBF4 154 aa8.05□□□□□ -1.12
CAPN1-208ENST00000527323 DNAH10Q8IVF4 4471 aa8.03□□□□□ -1.12
CAPN1-208ENST00000527323 A0A1B0GW54 56 aa8.03□□□□□ -1.12
CAPN1-208ENST00000527323 CASC10Q5T4H9 136 aa8.03□□□□□ -1.12
CAPN1-208ENST00000527323 STARD9Q9P2P6 4700 aa8.03□□□□□ -1.12
CAPN1-208ENST00000527323 LRCOL1A6NCL2 159 aa8.01□□□□□ -1.13
CAPN1-208ENST00000527323 TLX1NBP0CAT3 122 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms