RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 SERF1AO75920 110 aa8.56□□□□□ -1.04
CHMP4A-203ENST00000527154 RPL37P61927 97 aaKnown RBP8.56□□□□□ -1.04
CHMP4A-203ENST00000527154 LEPROTL1O95214 131 aa8.55□□□□□ -1.04
CHMP4A-203ENST00000527154 IGLV6-57P01721 117 aa8.55□□□□□ -1.04
CHMP4A-203ENST00000527154 S100A12P80511 92 aa8.55□□□□□ -1.04
CHMP4A-203ENST00000527154 KRTAP19-1Q8IUB9 90 aa8.55□□□□□ -1.04
CHMP4A-203ENST00000527154 HERV-K104P63124 156 aa8.54□□□□□ -1.04
CHMP4A-203ENST00000527154 LOC105371267A0A1B0GV96 52 aa8.53□□□□□ -1.04
CHMP4A-203ENST00000527154 LINC00587B1AMM8 73 aa8.53□□□□□ -1.04
CHMP4A-203ENST00000527154 LINC00310P59036 64 aa8.53□□□□□ -1.04
CHMP4A-203ENST00000527154 Q6ZRX8 168 aa8.53□□□□□ -1.04
CHMP4A-203ENST00000527154 LIMD2Q9BT23 127 aa8.53□□□□□ -1.04
CHMP4A-203ENST00000527154 PLNP26678 52 aa8.51□□□□□ -1.05
CHMP4A-203ENST00000527154 C9orf153Q5TBE3 101 aa8.51□□□□□ -1.05
CHMP4A-203ENST00000527154 MAP1LC3CQ9BXW4 147 aa8.51□□□□□ -1.05
CHMP4A-203ENST00000527154 MYMXA0A1B0GTQ4 84 aa8.5□□□□□ -1.05
CHMP4A-203ENST00000527154 HIST1H2BKO60814 126 aa8.5□□□□□ -1.05
CHMP4A-203ENST00000527154 HIST1H2BJP06899 126 aa8.5□□□□□ -1.05
CHMP4A-203ENST00000527154 HIST1H2BOP23527 126 aa8.5□□□□□ -1.05
CHMP4A-203ENST00000527154 HIST1H2BBP33778 126 aa8.5□□□□□ -1.05
CHMP4A-203ENST00000527154 HIST1H2BDP58876 126 aa8.5□□□□□ -1.05
CHMP4A-203ENST00000527154 HIST1H2BCP62807 126 aa8.5□□□□□ -1.05
CHMP4A-203ENST00000527154 HIST2H2BEQ16778 126 aa8.5□□□□□ -1.05
CHMP4A-203ENST00000527154 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.5□□□□□ -1.05
CHMP4A-203ENST00000527154 HIST1H2BHQ93079 126 aa8.5□□□□□ -1.05
CHMP4A-203ENST00000527154 HIST1H2BNQ99877 126 aa8.5□□□□□ -1.05
CHMP4A-203ENST00000527154 HIST1H2BMQ99879 126 aa8.5□□□□□ -1.05
CHMP4A-203ENST00000527154 DDTP30046 118 aa8.49□□□□□ -1.05
CHMP4A-203ENST00000527154 C5orf52A6NGY3 159 aa8.48□□□□□ -1.05
CHMP4A-203ENST00000527154 LOC107984156A0A0G2JMH3 177 aa8.46□□□□□ -1.06
CHMP4A-203ENST00000527154 TRBV10-2A0A0K0K1G8 114 aa8.46□□□□□ -1.06
CHMP4A-203ENST00000527154 LCE2BO14633 110 aa8.46□□□□□ -1.06
CHMP4A-203ENST00000527154 DPM2O94777 84 aa8.46□□□□□ -1.06
CHMP4A-203ENST00000527154 FABP4P15090 132 aa8.46□□□□□ -1.06
CHMP4A-203ENST00000527154 SPRR1BP22528 89 aa8.46□□□□□ -1.06
CHMP4A-203ENST00000527154 COA6Q5JTJ3 125 aaKnown RBP8.46□□□□□ -1.06
CHMP4A-203ENST00000527154 Q5XG85 94 aa8.46□□□□□ -1.06
CHMP4A-203ENST00000527154 ARL17AQ8IVW1 177 aa8.46□□□□□ -1.06
CHMP4A-203ENST00000527154 H0Y8G0 127 aa8.45□□□□□ -1.06
CHMP4A-203ENST00000527154 HERVK_113P61574 105 aa8.45□□□□□ -1.06
CHMP4A-203ENST00000527154 TSPEAR-AS2P59090 65 aa8.44□□□□□ -1.06
CHMP4A-203ENST00000527154 MIEN1Q9BRT3 115 aa8.44□□□□□ -1.06
CHMP4A-203ENST00000527154 SPANXB1Q9NS25 103 aaPredicted RBP8.44□□□□□ -1.06
CHMP4A-203ENST00000527154 TMA7Q9Y2S6 64 aaKnown RBP8.44□□□□□ -1.06
CHMP4A-203ENST00000527154 IGKCP01834 107 aa8.43□□□□□ -1.06
CHMP4A-203ENST00000527154 CD164Q04900 197 aa8.43□□□□□ -1.06
CHMP4A-203ENST00000527154 S100A7L2Q5SY68 101 aa8.43□□□□□ -1.06
CHMP4A-203ENST00000527154 ST20-AS1Q8NBB2 130 aa8.43□□□□□ -1.06
CHMP4A-203ENST00000527154 JOSD1Q15040 202 aaPredicted RBP8.42□□□□□ -1.06
CHMP4A-203ENST00000527154 TRAV23DV6A0A075B6W5 121 aa8.41□□□□□ -1.06
CHMP4A-203ENST00000527154 LEPROTO15243 131 aa8.41□□□□□ -1.06
CHMP4A-203ENST00000527154 SYS1-DBNDD2H3BUS1 97 aa8.4□□□□□ -1.06
CHMP4A-203ENST00000527154 NMUP48645 174 aa8.4□□□□□ -1.06
CHMP4A-203ENST00000527154 C1orf195Q5TG92 126 aa8.4□□□□□ -1.06
CHMP4A-203ENST00000527154 PET117Q6UWS5 81 aa8.4□□□□□ -1.06
CHMP4A-203ENST00000527154 J3QQQ9 107 aa8.39□□□□□ -1.07
CHMP4A-203ENST00000527154 NDUFC2O95298 119 aa8.39□□□□□ -1.07
CHMP4A-203ENST00000527154 AKR1D1P51857 326 aa8.39□□□□□ -1.07
CHMP4A-203ENST00000527154 HRCT1Q6UXD1 115 aa8.39□□□□□ -1.07
CHMP4A-203ENST00000527154 ZNF73O43830 326 aaPredicted RBP8.38□□□□□ -1.07
CHMP4A-203ENST00000527154 MT2AP02795 61 aa8.38□□□□□ -1.07
CHMP4A-203ENST00000527154 LINC01545Q5VT33 79 aa8.37□□□□□ -1.07
CHMP4A-203ENST00000527154 KRTAP9-3Q9BYQ3 159 aa8.37□□□□□ -1.07
CHMP4A-203ENST00000527154 E9PLD3 99 aa8.36□□□□□ -1.07
CHMP4A-203ENST00000527154 LGALS3P17931 250 aaKnown RBP8.36□□□□□ -1.07
CHMP4A-203ENST00000527154 PMCHL2Q9BQD1 86 aa8.36□□□□□ -1.07
CHMP4A-203ENST00000527154 C20orf202A1L168 122 aa8.35□□□□□ -1.07
CHMP4A-203ENST00000527154 NPC2P61916 151 aa8.35□□□□□ -1.07
CHMP4A-203ENST00000527154 HINT1P49773 126 aaPredicted RBP8.34□□□□□ -1.07
CHMP4A-203ENST00000527154 SLC25A34Q6PIV7 304 aa8.34□□□□□ -1.07
CHMP4A-203ENST00000527154 SOSTDC1Q6X4U4 206 aa8.34□□□□□ -1.07
CHMP4A-203ENST00000527154 EIF4EBP3O60516 100 aaPredicted RBP8.33□□□□□ -1.08
CHMP4A-203ENST00000527154 C3orf79P0CE67 100 aa8.33□□□□□ -1.08
CHMP4A-203ENST00000527154 MT1FP04733 61 aa8.32□□□□□ -1.08
CHMP4A-203ENST00000527154 KRTDAPP60985 99 aa8.32□□□□□ -1.08
CHMP4A-203ENST00000527154 Q6Q795 121 aa8.32□□□□□ -1.08
CHMP4A-203ENST00000527154 KRTAP6-3Q3LI67 103 aa8.31□□□□□ -1.08
CHMP4A-203ENST00000527154 SMIM29Q86T20 159 aa8.31□□□□□ -1.08
CHMP4A-203ENST00000527154 CBY1Q9Y3M2 126 aa8.31□□□□□ -1.08
CHMP4A-203ENST00000527154 A0A0J9YXY3 114 aa8.3□□□□□ -1.08
CHMP4A-203ENST00000527154 KRTAP19-6Q3LI70 58 aa8.3□□□□□ -1.08
CHMP4A-203ENST00000527154 ADAMTSL4-AS1Q5T5F5 129 aa8.3□□□□□ -1.08
CHMP4A-203ENST00000527154 S100A6P06703 90 aa8.29□□□□□ -1.08
CHMP4A-203ENST00000527154 S100A2P29034 98 aa8.29□□□□□ -1.08
CHMP4A-203ENST00000527154 LAMTOR3Q9UHA4 124 aa8.29□□□□□ -1.08
CHMP4A-203ENST00000527154 OR13C6PQ8NH95 151 aa8.28□□□□□ -1.08
CHMP4A-203ENST00000527154 PRO1933Q9H354 126 aa8.28□□□□□ -1.08
CHMP4A-203ENST00000527154 DHRS4-AS1Q9P1J3 65 aa8.28□□□□□ -1.08
CHMP4A-203ENST00000527154 NEBP20929 6669 aa8.27□□□□□ -1.09
CHMP4A-203ENST00000527154 H7C2G1 150 aa8.27□□□□□ -1.09
CHMP4A-203ENST00000527154 TIMM17BO60830 172 aa8.27□□□□□ -1.09
CHMP4A-203ENST00000527154 SNRPEP62304 92 aaKnown RBP8.27□□□□□ -1.09
CHMP4A-203ENST00000527154 HIST3H2BBQ8N257 126 aa8.27□□□□□ -1.09
CHMP4A-203ENST00000527154 Q75L30 129 aa8.26□□□□□ -1.09
CHMP4A-203ENST00000527154 HIST1H2BLQ99880 126 aa8.25□□□□□ -1.09
CHMP4A-203ENST00000527154 SPANXCQ9NY87 97 aa8.25□□□□□ -1.09
CHMP4A-203ENST00000527154 LINC00308Q8TCZ7 52 aa8.24□□□□□ -1.09
CHMP4A-203ENST00000527154 ZNF815PA8K554 130 aa8.23□□□□□ -1.09
CHMP4A-203ENST00000527154 Q1RN00 199 aa8.23□□□□□ -1.09
CHMP4A-203ENST00000527154 LINC00518Q8N0U6 118 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms