RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 FLNBO75369 2602 aaKnown RBP13.23□□□□□ -0.29
SMIM3-201ENST00000526627 HAMPP81172 84 aa13.23□□□□□ -0.29
SMIM3-201ENST00000526627 TM2D3Q9BRN9 247 aa13.22□□□□□ -0.29
SMIM3-201ENST00000526627 PLA2G2DQ9UNK4 145 aa13.22□□□□□ -0.29
SMIM3-201ENST00000526627 MAST4O15021 2626 aa13.21□□□□□ -0.29
SMIM3-201ENST00000526627 HUWE1Q7Z6Z7 4374 aaKnown RBP13.21□□□□□ -0.3
SMIM3-201ENST00000526627 MRAPQ8TCY5 172 aa13.21□□□□□ -0.3
SMIM3-201ENST00000526627 CXCL6P80162 114 aa13.19□□□□□ -0.3
SMIM3-201ENST00000526627 FAM168BA1KXE4 195 aa13.19□□□□□ -0.3
SMIM3-201ENST00000526627 KRTAP7-1Q8IUC3 87 aa13.18□□□□□ -0.3
SMIM3-201ENST00000526627 NOTCH1P46531 2555 aa13.17□□□□□ -0.3
SMIM3-201ENST00000526627 K7EIL1 84 aa13.17□□□□□ -0.3
SMIM3-201ENST00000526627 IGLV5-37A0A075B6J1 123 aa13.17□□□□□ -0.3
SMIM3-201ENST00000526627 KRTAP4-16G5E9R7 235 aaPredicted RBP13.16□□□□□ -0.3
SMIM3-201ENST00000526627 Q8N377 158 aa13.16□□□□□ -0.3
SMIM3-201ENST00000526627 RPL37AP8A6NKH3 93 aa13.14□□□□□ -0.31
SMIM3-201ENST00000526627 IGLV1-50A0A075B6I6 118 aa13.13□□□□□ -0.31
SMIM3-201ENST00000526627 SPRR1AP35321 89 aa13.13□□□□□ -0.31
SMIM3-201ENST00000526627 Q6ZRX8 168 aa13.12□□□□□ -0.31
SMIM3-201ENST00000526627 SCXQ7RTU7 201 aa13.12□□□□□ -0.31
SMIM3-201ENST00000526627 Q9BRP9 147 aa13.12□□□□□ -0.31
SMIM3-201ENST00000526627 BCE1O60756 84 aa13.12□□□□□ -0.31
SMIM3-201ENST00000526627 PRYO14603 147 aa13.11□□□□□ -0.31
SMIM3-201ENST00000526627 DEFB105AQ8NG35 78 aa13.11□□□□□ -0.31
SMIM3-201ENST00000526627 RMI2Q96E14 147 aa13.11□□□□□ -0.31
SMIM3-201ENST00000526627 BAHCC1Q9P281 2608 aa13.1□□□□□ -0.31
SMIM3-201ENST00000526627 IGLV5-48A0A075B6I7 105 aa13.08□□□□□ -0.31
SMIM3-201ENST00000526627 DHRS4-AS1Q9P1J3 65 aa13.08□□□□□ -0.31
SMIM3-201ENST00000526627 TMEM258P61165 79 aa13.08□□□□□ -0.32
SMIM3-201ENST00000526627 TRAV7A0A075B6U4 112 aa13.06□□□□□ -0.32
SMIM3-201ENST00000526627 FAM19A5Q7Z5A7 132 aaPredicted RBP13.05□□□□□ -0.32
SMIM3-201ENST00000526627 MRPL55Q7Z7F7 128 aaKnown RBP13.05□□□□□ -0.32
SMIM3-201ENST00000526627 LOC107984640A0A0U1RRK4 108 aa13.04□□□□□ -0.32
SMIM3-201ENST00000526627 ETDCA0A1B0GVM5 59 aa13.04□□□□□ -0.32
SMIM3-201ENST00000526627 NBEAL1Q6ZS30 2694 aa13.04□□□□□ -0.32
SMIM3-201ENST00000526627 C20orf197Q8N268 126 aa13.04□□□□□ -0.32
SMIM3-201ENST00000526627 ST20-AS1Q8NBB2 130 aa13.04□□□□□ -0.32
SMIM3-201ENST00000526627 TNP2Q05952 138 aa13.02□□□□□ -0.32
SMIM3-201ENST00000526627 COL6A5A8TX70 2615 aa13.02□□□□□ -0.33
SMIM3-201ENST00000526627 KRTAP1-5Q9BYS1 174 aa13.02□□□□□ -0.33
SMIM3-201ENST00000526627 ERC2-IT1O76042 136 aa13.01□□□□□ -0.33
SMIM3-201ENST00000526627 C3orf84H3BNL1 204 aa13.01□□□□□ -0.33
SMIM3-201ENST00000526627 J3KT08 172 aa13□□□□□ -0.33
SMIM3-201ENST00000526627 RPS28P62857 69 aaKnown RBP13□□□□□ -0.33
SMIM3-201ENST00000526627 NREPQ16612 68 aa13□□□□□ -0.33
SMIM3-201ENST00000526627 DPH3Q96FX2 82 aa12.99□□□□□ -0.33
SMIM3-201ENST00000526627 Q8N9L7 120 aa12.99□□□□□ -0.33
SMIM3-201ENST00000526627 A0A1W2PNM2 257 aa12.98□□□□□ -0.33
SMIM3-201ENST00000526627 IGKV4-1P06312 121 aa12.98□□□□□ -0.33
SMIM3-201ENST00000526627 DNAH10Q8IVF4 4471 aa12.95□□□□□ -0.34
SMIM3-201ENST00000526627 REG3GQ6UW15 175 aa12.94□□□□□ -0.34
SMIM3-201ENST00000526627 C1orf137Q5JT78 98 aa12.94□□□□□ -0.34
SMIM3-201ENST00000526627 A0A096LNI7 61 aa12.93□□□□□ -0.34
SMIM3-201ENST00000526627 BPY2O14599 106 aa12.93□□□□□ -0.34
SMIM3-201ENST00000526627 UBE2BP63146 152 aa12.93□□□□□ -0.34
SMIM3-201ENST00000526627 KLKP1Q107X0 134 aa12.93□□□□□ -0.34
SMIM3-201ENST00000526627 H7BZZ5 65 aa12.92□□□□□ -0.34
SMIM3-201ENST00000526627 FUSP35637 526 aaKnown RBP eCLIP12.91□□□□□ -0.34
SMIM3-201ENST00000526627 DNAH9Q9NYC9 4486 aa12.91□□□□□ -0.34
SMIM3-201ENST00000526627 A0A1B0GW54 56 aa12.91□□□□□ -0.34
SMIM3-201ENST00000526627 OXTP01178 125 aa12.91□□□□□ -0.34
SMIM3-201ENST00000526627 CNBPP62633 177 aaKnown RBP12.91□□□□□ -0.34
SMIM3-201ENST00000526627 Q8NBF4 154 aa12.9□□□□□ -0.34
SMIM3-201ENST00000526627 A0A1W2PNN7 141 aa12.9□□□□□ -0.34
SMIM3-201ENST00000526627 C16orf90A8MZG2 172 aa12.9□□□□□ -0.34
SMIM3-201ENST00000526627 SMIM29Q86T20 159 aa12.9□□□□□ -0.34
SMIM3-201ENST00000526627 SNURFQ9Y675 71 aa12.89□□□□□ -0.35
SMIM3-201ENST00000526627 SPRR4Q96PI1 79 aa12.88□□□□□ -0.35
SMIM3-201ENST00000526627 LYSTQ99698 3801 aa12.88□□□□□ -0.35
SMIM3-201ENST00000526627 APLNQ9ULZ1 77 aa12.88□□□□□ -0.35
SMIM3-201ENST00000526627 IGKV2-24A0A0C4DH68 120 aa12.87□□□□□ -0.35
SMIM3-201ENST00000526627 MGAM2Q2M2H8 2515 aa12.85□□□□□ -0.35
SMIM3-201ENST00000526627 COL7A1Q02388 2944 aa12.84□□□□□ -0.35
SMIM3-201ENST00000526627 PSCAO43653 123 aa12.83□□□□□ -0.36
SMIM3-201ENST00000526627 FAM236DA0A1B0GTK5 79 aa12.83□□□□□ -0.36
SMIM3-201ENST00000526627 FAM236CP0DP71 79 aa12.83□□□□□ -0.36
SMIM3-201ENST00000526627 OCR1Q9BZK8 76 aa12.83□□□□□ -0.36
SMIM3-201ENST00000526627 DYNC2H1Q8NCM8 4307 aaKnown RBP12.82□□□□□ -0.36
SMIM3-201ENST00000526627 PRLHP81277 87 aa12.82□□□□□ -0.36
SMIM3-201ENST00000526627 STAB2Q8WWQ8 2551 aa12.82□□□□□ -0.36
SMIM3-201ENST00000526627 UBE2DNLQ8IWF7 75 aa12.82□□□□□ -0.36
SMIM3-201ENST00000526627 LINC00476Q8WZB0 136 aa12.82□□□□□ -0.36
SMIM3-201ENST00000526627 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.8□□□□□ -0.36
SMIM3-201ENST00000526627 KRTAP11-1Q8IUC1 163 aa12.79□□□□□ -0.36
SMIM3-201ENST00000526627 A0A0G2JQZ4 141 aa12.79□□□□□ -0.36
SMIM3-201ENST00000526627 F8WEM9 126 aa12.78□□□□□ -0.36
SMIM3-201ENST00000526627 CHTF8P0CG12 524 aa12.78□□□□□ -0.36
SMIM3-201ENST00000526627 DSCR10P59022 87 aa12.77□□□□□ -0.36
SMIM3-201ENST00000526627 TMEM254Q8TBM7 123 aa12.77□□□□□ -0.37
SMIM3-201ENST00000526627 IGFL1Q6UW32 110 aa12.76□□□□□ -0.37
SMIM3-201ENST00000526627 C14orf177Q52M58 125 aa12.75□□□□□ -0.37
SMIM3-201ENST00000526627 PHF5AQ7RTV0 110 aaKnown RBP12.74□□□□□ -0.37
SMIM3-201ENST00000526627 HIGD2AQ9BW72 106 aa12.74□□□□□ -0.37
SMIM3-201ENST00000526627 IGLV8-61A0A075B6I0 122 aa12.73□□□□□ -0.37
SMIM3-201ENST00000526627 EPM2AB3EWF7 344 aa12.73□□□□□ -0.37
SMIM3-201ENST00000526627 C5orf47Q569G3 176 aa12.73□□□□□ -0.37
SMIM3-201ENST00000526627 LRCOL1A6NCL2 159 aa12.73□□□□□ -0.37
SMIM3-201ENST00000526627 NDUFC1O43677 76 aa12.72□□□□□ -0.37
SMIM3-201ENST00000526627 B9D2Q9BPU9 175 aa12.72□□□□□ -0.37
SMIM3-201ENST00000526627 DNAH7Q8WXX0 4024 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms