RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 NPC2P61916 151 aa13.04□□□□□ -0.32
USP47-205ENST00000525257 HRCT1Q6UXD1 115 aa13.04□□□□□ -0.32
USP47-205ENST00000525257 SNAPINO95295 136 aa13.03□□□□□ -0.32
USP47-205ENST00000525257 LIMD2Q9BT23 127 aa13.03□□□□□ -0.32
USP47-205ENST00000525257 CFC1BP0CG36 223 aa13.02□□□□□ -0.33
USP47-205ENST00000525257 LGALS3P17931 250 aaKnown RBP13.02□□□□□ -0.33
USP47-205ENST00000525257 PLNP26678 52 aa13.02□□□□□ -0.33
USP47-205ENST00000525257 NMUP48645 174 aa13.02□□□□□ -0.33
USP47-205ENST00000525257 SOSTDC1Q6X4U4 206 aa13.02□□□□□ -0.33
USP47-205ENST00000525257 YPEL4Q96NS1 127 aa13.02□□□□□ -0.33
USP47-205ENST00000525257 EIF4EBP3O60516 100 aaPredicted RBP13.01□□□□□ -0.33
USP47-205ENST00000525257 HERVK_113P61574 105 aa13.01□□□□□ -0.33
USP47-205ENST00000525257 LEPROTL1O95214 131 aa13□□□□□ -0.33
USP47-205ENST00000525257 SVBPQ8N300 66 aa13□□□□□ -0.33
USP47-205ENST00000525257 C5orf52A6NGY3 159 aa12.99□□□□□ -0.33
USP47-205ENST00000525257 PMCHL2Q9BQD1 86 aa12.99□□□□□ -0.33
USP47-205ENST00000525257 DPM2O94777 84 aa12.98□□□□□ -0.33
USP47-205ENST00000525257 HINT1P49773 126 aaPredicted RBP12.97□□□□□ -0.33
USP47-205ENST00000525257 NDUFA5Q16718 116 aa12.97□□□□□ -0.33
USP47-205ENST00000525257 ADAMTSL4-AS1Q5T5F5 129 aa12.97□□□□□ -0.33
USP47-205ENST00000525257 SPRR1BP22528 89 aa12.95□□□□□ -0.34
USP47-205ENST00000525257 SLC25A34Q6PIV7 304 aa12.94□□□□□ -0.34
USP47-205ENST00000525257 A0A0J9YXY3 114 aa12.93□□□□□ -0.34
USP47-205ENST00000525257 SERF1AO75920 110 aa12.93□□□□□ -0.34
USP47-205ENST00000525257 IGKCP01834 107 aa12.93□□□□□ -0.34
USP47-205ENST00000525257 LORP23490 312 aaPredicted RBP12.93□□□□□ -0.34
USP47-205ENST00000525257 LINC00310P59036 64 aa12.93□□□□□ -0.34
USP47-205ENST00000525257 CBY1Q9Y3M2 126 aa12.92□□□□□ -0.34
USP47-205ENST00000525257 FABP4P15090 132 aa12.91□□□□□ -0.34
USP47-205ENST00000525257 KRTAP10-6P60371 365 aaPredicted RBP12.91□□□□□ -0.34
USP47-205ENST00000525257 LAMTOR3Q9UHA4 124 aa12.91□□□□□ -0.34
USP47-205ENST00000525257 OR13C6PQ8NH95 151 aa12.9□□□□□ -0.34
USP47-205ENST00000525257 DHRS4-AS1Q9P1J3 65 aa12.9□□□□□ -0.34
USP47-205ENST00000525257 HSPB8Q9UJY1 196 aa12.9□□□□□ -0.34
USP47-205ENST00000525257 TRGC2P03986 189 aa12.88□□□□□ -0.35
USP47-205ENST00000525257 SPANXCQ9NY87 97 aa12.86□□□□□ -0.35
USP47-205ENST00000525257 H7C2G1 150 aa12.85□□□□□ -0.35
USP47-205ENST00000525257 Q1RN00 199 aa12.85□□□□□ -0.35
USP47-205ENST00000525257 M0R2T5 61 aa12.84□□□□□ -0.35
USP47-205ENST00000525257 LINC00308Q8TCZ7 52 aa12.84□□□□□ -0.35
USP47-205ENST00000525257 E9PLD3 99 aa12.83□□□□□ -0.36
USP47-205ENST00000525257 CD164Q04900 197 aa12.83□□□□□ -0.36
USP47-205ENST00000525257 DEFB105AQ8NG35 78 aa12.83□□□□□ -0.36
USP47-205ENST00000525257 FLGP20930 4061 aaPredicted RBP12.82□□□□□ -0.36
USP47-205ENST00000525257 TAL2Q16559 108 aa12.82□□□□□ -0.36
USP47-205ENST00000525257 LITAFQ99732 161 aa12.82□□□□□ -0.36
USP47-205ENST00000525257 PRO1933Q9H354 126 aa12.82□□□□□ -0.36
USP47-205ENST00000525257 COX7BP24311 80 aa12.81□□□□□ -0.36
USP47-205ENST00000525257 ELOF1P60002 83 aaKnown RBP12.81□□□□□ -0.36
USP47-205ENST00000525257 SPANXDQ9BXN6 97 aa12.8□□□□□ -0.36
USP47-205ENST00000525257 KRTAP3-3Q9BYR6 98 aa12.8□□□□□ -0.36
USP47-205ENST00000525257 KRTAP3-2Q9BYR7 98 aa12.8□□□□□ -0.36
USP47-205ENST00000525257 C6orf99Q4VX62 202 aa12.78□□□□□ -0.36
USP47-205ENST00000525257 COX6B2Q6YFQ2 88 aa12.78□□□□□ -0.36
USP47-205ENST00000525257 RPL37P61927 97 aaKnown RBP12.77□□□□□ -0.37
USP47-205ENST00000525257 C1orf195Q5TG92 126 aa12.77□□□□□ -0.37
USP47-205ENST00000525257 TEX49A0A1B0GTD5 131 aa12.75□□□□□ -0.37
USP47-205ENST00000525257 Q5XG85 94 aa12.75□□□□□ -0.37
USP47-205ENST00000525257 TIMM17BO60830 172 aa12.74□□□□□ -0.37
USP47-205ENST00000525257 A0A0G2JQZ4 141 aa12.73□□□□□ -0.37
USP47-205ENST00000525257 AKR1D1P51857 326 aa12.73□□□□□ -0.37
USP47-205ENST00000525257 SMIM29Q86T20 159 aa12.72□□□□□ -0.37
USP47-205ENST00000525257 LINC00518Q8N0U6 118 aa12.7□□□□□ -0.38
USP47-205ENST00000525257 ZNF815PA8K554 130 aa12.69□□□□□ -0.38
USP47-205ENST00000525257 TTTY13Q9BZ97 58 aa12.67□□□□□ -0.38
USP47-205ENST00000525257 SYS1-DBNDD2H3BUS1 97 aa12.66□□□□□ -0.38
USP47-205ENST00000525257 IGLV5-48A0A075B6I7 105 aa12.64□□□□□ -0.39
USP47-205ENST00000525257 TRBV7-6A0A0J9YX20 115 aa12.64□□□□□ -0.39
USP47-205ENST00000525257 A0A1B0GWB2 263 aa12.62□□□□□ -0.39
USP47-205ENST00000525257 LINC01545Q5VT33 79 aa12.6□□□□□ -0.39
USP47-205ENST00000525257 TCL1BO95988 128 aa12.58□□□□□ -0.4
USP47-205ENST00000525257 A6NDN8 102 aa12.57□□□□□ -0.4
USP47-205ENST00000525257 COLCA2A8K830 154 aa12.57□□□□□ -0.4
USP47-205ENST00000525257 PET117Q6UWS5 81 aa12.54□□□□□ -0.4
USP47-205ENST00000525257 SCGB1D4Q6XE38 83 aa12.54□□□□□ -0.4
USP47-205ENST00000525257 Q6Q795 121 aa12.53□□□□□ -0.4
USP47-205ENST00000525257 A4D1N5 150 aa12.5□□□□□ -0.41
USP47-205ENST00000525257 COPS9Q8WXC6 57 aa12.5□□□□□ -0.41
USP47-205ENST00000525257 NHP2Q9NX24 153 aaKnown RBP12.5□□□□□ -0.41
USP47-205ENST00000525257 IFITM1P13164 125 aa12.48□□□□□ -0.41
USP47-205ENST00000525257 PCP2Q8IVA1 136 aa12.48□□□□□ -0.41
USP47-205ENST00000525257 F8WEM9 126 aa12.47□□□□□ -0.41
USP47-205ENST00000525257 HIST1H2BKO60814 126 aa12.47□□□□□ -0.41
USP47-205ENST00000525257 HIST1H2BJP06899 126 aa12.47□□□□□ -0.41
USP47-205ENST00000525257 HIST1H2BOP23527 126 aa12.47□□□□□ -0.41
USP47-205ENST00000525257 HIST1H2BBP33778 126 aa12.47□□□□□ -0.41
USP47-205ENST00000525257 HIST1H2BDP58876 126 aa12.47□□□□□ -0.41
USP47-205ENST00000525257 HIST1H2BCP62807 126 aa12.47□□□□□ -0.41
USP47-205ENST00000525257 HIST2H2BEQ16778 126 aa12.47□□□□□ -0.41
USP47-205ENST00000525257 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.47□□□□□ -0.41
USP47-205ENST00000525257 HIST1H2BHQ93079 126 aa12.47□□□□□ -0.41
USP47-205ENST00000525257 HIST1H2BNQ99877 126 aa12.47□□□□□ -0.41
USP47-205ENST00000525257 HIST1H2BMQ99879 126 aa12.47□□□□□ -0.41
USP47-205ENST00000525257 C3orf79P0CE67 100 aa12.46□□□□□ -0.41
USP47-205ENST00000525257 MUSTN1Q8IVN3 82 aa12.46□□□□□ -0.41
USP47-205ENST00000525257 SMIM11BQ8TCY0 68 aa12.45□□□□□ -0.42
USP47-205ENST00000525257 ATP11AUNQ6ZP68 121 aa12.44□□□□□ -0.42
USP47-205ENST00000525257 OBSCN-AS1Q96MR7 158 aa12.44□□□□□ -0.42
USP47-205ENST00000525257 ANKRD39Q53RE8 183 aa12.42□□□□□ -0.42
USP47-205ENST00000525257 Q6ZVH6 145 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms