RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 TRBV10-2A0A0K0K1G8 114 aa5.11□□□□□ -1.59
CTNNA1-240ENST00000523912 DDTP30046 118 aa5.11□□□□□ -1.59
CTNNA1-240ENST00000523912 FP248Q71RG6 208 aaPredicted RBP5.11□□□□□ -1.59
CTNNA1-240ENST00000523912 Q8NBF4 154 aa5.11□□□□□ -1.59
CTNNA1-240ENST00000523912 HSBP1L1C9JCN9 74 aa5.1□□□□□ -1.59
CTNNA1-240ENST00000523912 S100A7L2Q5SY68 101 aa5.1□□□□□ -1.59
CTNNA1-240ENST00000523912 DAND5Q8N907 189 aa5.1□□□□□ -1.59
CTNNA1-240ENST00000523912 SMCR5Q8TEV8 140 aa5.1□□□□□ -1.59
CTNNA1-240ENST00000523912 PPDPFQ9H3Y8 114 aa5.1□□□□□ -1.59
CTNNA1-240ENST00000523912 CBY1Q9Y3M2 126 aa5.1□□□□□ -1.59
CTNNA1-240ENST00000523912 LOC107984156A0A0G2JMH3 177 aa5.09□□□□□ -1.59
CTNNA1-240ENST00000523912 SCGB1D1O95968 90 aa5.09□□□□□ -1.59
CTNNA1-240ENST00000523912 SPINK1P00995 79 aa5.09□□□□□ -1.59
CTNNA1-240ENST00000523912 JOSD1Q15040 202 aaPredicted RBP5.09□□□□□ -1.59
CTNNA1-240ENST00000523912 LINC00483Q53H64 154 aa5.09□□□□□ -1.59
CTNNA1-240ENST00000523912 ANKRD39Q53RE8 183 aa5.09□□□□□ -1.59
CTNNA1-240ENST00000523912 GAGE2AQ6NT46 116 aa5.09□□□□□ -1.59
CTNNA1-240ENST00000523912 ARL17AQ8IVW1 177 aa5.09□□□□□ -1.59
CTNNA1-240ENST00000523912 ZNF815PA8K554 130 aa5.08□□□□□ -1.6
CTNNA1-240ENST00000523912 B5MCH6 92 aa5.08□□□□□ -1.6
CTNNA1-240ENST00000523912 KRTAP4-16G5E9R7 235 aaPredicted RBP5.08□□□□□ -1.6
CTNNA1-240ENST00000523912 NDUFC2O95298 119 aa5.08□□□□□ -1.6
CTNNA1-240ENST00000523912 TRAV23DV6A0A075B6W5 121 aa5.07□□□□□ -1.6
CTNNA1-240ENST00000523912 IGLV9-49A0A0B4J1Y8 123 aa5.07□□□□□ -1.6
CTNNA1-240ENST00000523912 A0A0J9YXY3 114 aa5.07□□□□□ -1.6
CTNNA1-240ENST00000523912 HINT1P49773 126 aaPredicted RBP5.07□□□□□ -1.6
CTNNA1-240ENST00000523912 MOBPQ13875 183 aa5.07□□□□□ -1.6
CTNNA1-240ENST00000523912 Q6ZRX8 168 aa5.07□□□□□ -1.6
CTNNA1-240ENST00000523912 FAT4Q6V0I7 4981 aa5.06□□□□□ -1.6
CTNNA1-240ENST00000523912 IGLV6-57P01721 117 aa5.06□□□□□ -1.6
CTNNA1-240ENST00000523912 TTTY13Q9BZ97 58 aa5.06□□□□□ -1.6
CTNNA1-240ENST00000523912 ZNF73O43830 326 aaPredicted RBP5.05□□□□□ -1.6
CTNNA1-240ENST00000523912 TIMM17BO60830 172 aa5.05□□□□□ -1.6
CTNNA1-240ENST00000523912 RPS29P62273 56 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-240ENST00000523912 PYY3Q5JQD4 70 aa5.05□□□□□ -1.6
CTNNA1-240ENST00000523912 C9orf153Q5TBE3 101 aa5.05□□□□□ -1.6
CTNNA1-240ENST00000523912 SCGB1D4Q6XE38 83 aa5.05□□□□□ -1.6
CTNNA1-240ENST00000523912 SSBP3-AS1Q7Z2R9 100 aa5.05□□□□□ -1.6
CTNNA1-240ENST00000523912 PCP2Q8IVA1 136 aa5.05□□□□□ -1.6
CTNNA1-240ENST00000523912 MUC17Q685J3 4493 aa5.05□□□□□ -1.6
CTNNA1-240ENST00000523912 NPC2P61916 151 aa5.04□□□□□ -1.6
CTNNA1-240ENST00000523912 Q9BRP9 147 aa5.04□□□□□ -1.6
CTNNA1-240ENST00000523912 VAMP8Q9BV40 100 aa5.04□□□□□ -1.6
CTNNA1-240ENST00000523912 SLC25A20O43772 301 aa5.03□□□□□ -1.6
CTNNA1-240ENST00000523912 ERC2-IT1O76042 136 aa5.03□□□□□ -1.6
CTNNA1-240ENST00000523912 SLC25A34Q6PIV7 304 aa5.03□□□□□ -1.6
CTNNA1-240ENST00000523912 LITAFQ99732 161 aa5.03□□□□□ -1.6
CTNNA1-240ENST00000523912 SPANXCQ9NY87 97 aa5.03□□□□□ -1.6
CTNNA1-240ENST00000523912 PAM16Q9Y3D7 125 aa5.03□□□□□ -1.6
CTNNA1-240ENST00000523912 COX8AP10176 69 aa5.02□□□□□ -1.61
CTNNA1-240ENST00000523912 KRTAP13-3Q3SY46 172 aa5.02□□□□□ -1.61
CTNNA1-240ENST00000523912 SPATA45Q537H7 98 aa5.02□□□□□ -1.61
CTNNA1-240ENST00000523912 OR13C6PQ8NH95 151 aa5.02□□□□□ -1.61
CTNNA1-240ENST00000523912 SPANXDQ9BXN6 97 aa5.02□□□□□ -1.61
CTNNA1-240ENST00000523912 ADAMTSL4-AS1Q5T5F5 129 aa5.01□□□□□ -1.61
CTNNA1-240ENST00000523912 SOSTDC1Q6X4U4 206 aa5.01□□□□□ -1.61
CTNNA1-240ENST00000523912 LINC00308Q8TCZ7 52 aa5.01□□□□□ -1.61
CTNNA1-240ENST00000523912 COPS9Q8WXC6 57 aa5.01□□□□□ -1.61
CTNNA1-240ENST00000523912 DHRS4-AS1Q9P1J3 65 aa5.01□□□□□ -1.61
CTNNA1-240ENST00000523912 DLEU1O43261 78 aa5□□□□□ -1.61
CTNNA1-240ENST00000523912 SEC61BP60468 96 aaKnown RBP5□□□□□ -1.61
CTNNA1-240ENST00000523912 Q6ZVH6 145 aa5□□□□□ -1.61
CTNNA1-240ENST00000523912 SMIM6P0DI80 62 aa4.99□□□□□ -1.61
CTNNA1-240ENST00000523912 IFITM1P13164 125 aa4.99□□□□□ -1.61
CTNNA1-240ENST00000523912 LINC00518Q8N0U6 118 aa4.99□□□□□ -1.61
CTNNA1-240ENST00000523912 Q8N377 158 aa4.99□□□□□ -1.61
CTNNA1-240ENST00000523912 LIMD2Q9BT23 127 aa4.99□□□□□ -1.61
CTNNA1-240ENST00000523912 EIF4EBP3O60516 100 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-240ENST00000523912 ASB16-AS1Q495Z4 193 aa4.98□□□□□ -1.61
CTNNA1-240ENST00000523912 ST20-AS1Q8NBB2 130 aa4.98□□□□□ -1.61
CTNNA1-240ENST00000523912 LAMTOR3Q9UHA4 124 aa4.98□□□□□ -1.61
CTNNA1-240ENST00000523912 COX7BP24311 80 aa4.97□□□□□ -1.61
CTNNA1-240ENST00000523912 LCE2DQ5TA82 110 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-240ENST00000523912 C14orf144Q96I85 54 aa4.97□□□□□ -1.61
CTNNA1-240ENST00000523912 LOC105371267A0A1B0GV96 52 aa4.96□□□□□ -1.62
CTNNA1-240ENST00000523912 HIGD1BQ9P298 99 aa4.96□□□□□ -1.62
CTNNA1-240ENST00000523912 SPRR1BP22528 89 aa4.95□□□□□ -1.62
CTNNA1-240ENST00000523912 ELOF1P60002 83 aaKnown RBP4.95□□□□□ -1.62
CTNNA1-240ENST00000523912 C6orf99Q4VX62 202 aa4.95□□□□□ -1.62
CTNNA1-240ENST00000523912 C2orf91Q6ZV80 131 aa4.95□□□□□ -1.62
CTNNA1-240ENST00000523912 MUSTN1Q8IVN3 82 aa4.95□□□□□ -1.62
CTNNA1-240ENST00000523912 LINC01547P58512 204 aaPredicted RBP4.94□□□□□ -1.62
CTNNA1-240ENST00000523912 TAL2Q16559 108 aa4.94□□□□□ -1.62
CTNNA1-240ENST00000523912 HIST1H4GQ99525 98 aa4.94□□□□□ -1.62
CTNNA1-240ENST00000523912 UQCR10Q9UDW1 63 aa4.94□□□□□ -1.62
CTNNA1-240ENST00000523912 TRBV7-6A0A0J9YX20 115 aa4.93□□□□□ -1.62
CTNNA1-240ENST00000523912 XP32Q5T750 250 aa4.93□□□□□ -1.62
CTNNA1-240ENST00000523912 PRO1933Q9H354 126 aa4.93□□□□□ -1.62
CTNNA1-240ENST00000523912 TEX49A0A1B0GTD5 131 aa4.92□□□□□ -1.62
CTNNA1-240ENST00000523912 A0A1B0GWB2 263 aa4.92□□□□□ -1.62
CTNNA1-240ENST00000523912 A6NDN8 102 aa4.92□□□□□ -1.62
CTNNA1-240ENST00000523912 HRCT1Q6UXD1 115 aa4.92□□□□□ -1.62
CTNNA1-240ENST00000523912 DEFB105AQ8NG35 78 aa4.92□□□□□ -1.62
CTNNA1-240ENST00000523912 NHP2Q9NX24 153 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-240ENST00000523912 TRAV13-2A0A0B4J235 113 aa4.91□□□□□ -1.62
CTNNA1-240ENST00000523912 A4D1N5 150 aa4.91□□□□□ -1.62
CTNNA1-240ENST00000523912 H7C2G1 150 aa4.91□□□□□ -1.62
CTNNA1-240ENST00000523912 CD164Q04900 197 aa4.91□□□□□ -1.62
CTNNA1-240ENST00000523912 Q1RN00 199 aa4.91□□□□□ -1.62
CTNNA1-240ENST00000523912 TMEM238LA0A1B0GVL6 79 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms