RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 Q9BRP9 147 aa5.53□□□□□ -1.52
PABPC1-222ENST00000523555 AKR1D1P51857 326 aa5.52□□□□□ -1.53
PABPC1-222ENST00000523555 PRR4Q16378 134 aa5.52□□□□□ -1.53
PABPC1-222ENST00000523555 HIST3H2BBQ8N257 126 aa5.52□□□□□ -1.53
PABPC1-222ENST00000523555 PPDPFQ9H3Y8 114 aa5.52□□□□□ -1.53
PABPC1-222ENST00000523555 TIMM17BO60830 172 aa5.51□□□□□ -1.53
PABPC1-222ENST00000523555 S100A7L2Q5SY68 101 aa5.51□□□□□ -1.53
PABPC1-222ENST00000523555 PCP2Q8IVA1 136 aa5.51□□□□□ -1.53
PABPC1-222ENST00000523555 LINC00304Q8N9R0 145 aa5.51□□□□□ -1.53
PABPC1-222ENST00000523555 HIST1H2BLQ99880 126 aa5.51□□□□□ -1.53
PABPC1-222ENST00000523555 RETNLBQ9BQ08 111 aa5.51□□□□□ -1.53
PABPC1-222ENST00000523555 MUC17Q685J3 4493 aa5.51□□□□□ -1.53
PABPC1-222ENST00000523555 TRAV23DV6A0A075B6W5 121 aa5.5□□□□□ -1.53
PABPC1-222ENST00000523555 Q6ZRX8 168 aa5.5□□□□□ -1.53
PABPC1-222ENST00000523555 C20orf202A1L168 122 aa5.49□□□□□ -1.53
PABPC1-222ENST00000523555 SPANXCQ9NY87 97 aa5.49□□□□□ -1.53
PABPC1-222ENST00000523555 C5orf52A6NGY3 159 aa5.48□□□□□ -1.53
PABPC1-222ENST00000523555 ZNF73O43830 326 aaPredicted RBP5.48□□□□□ -1.53
PABPC1-222ENST00000523555 LINC00483Q53H64 154 aa5.48□□□□□ -1.53
PABPC1-222ENST00000523555 GAGE2AQ6NT46 116 aa5.48□□□□□ -1.53
PABPC1-222ENST00000523555 SPANXDQ9BXN6 97 aa5.48□□□□□ -1.53
PABPC1-222ENST00000523555 S100A2P29034 98 aa5.47□□□□□ -1.53
PABPC1-222ENST00000523555 S100A12P80511 92 aa5.47□□□□□ -1.53
PABPC1-222ENST00000523555 ST20-AS1Q8NBB2 130 aa5.47□□□□□ -1.53
PABPC1-222ENST00000523555 OR13C6PQ8NH95 151 aa5.47□□□□□ -1.53
PABPC1-222ENST00000523555 ZNF706Q9Y5V0 76 aaPredicted RBP5.47□□□□□ -1.53
PABPC1-222ENST00000523555 MUC2Q02817 5179 aa5.47□□□□□ -1.53
PABPC1-222ENST00000523555 SNRPEP62304 92 aaKnown RBP5.46□□□□□ -1.54
PABPC1-222ENST00000523555 SCGB1D4Q6XE38 83 aa5.46□□□□□ -1.54
PABPC1-222ENST00000523555 Q8NBF4 154 aa5.46□□□□□ -1.54
PABPC1-222ENST00000523555 MUSTN1Q8IVN3 82 aa5.45□□□□□ -1.54
PABPC1-222ENST00000523555 IGLV9-49A0A0B4J1Y8 123 aa5.44□□□□□ -1.54
PABPC1-222ENST00000523555 MOBPQ13875 183 aa5.44□□□□□ -1.54
PABPC1-222ENST00000523555 C6orf99Q4VX62 202 aa5.43□□□□□ -1.54
PABPC1-222ENST00000523555 LCE2BO14633 110 aa5.42□□□□□ -1.54
PABPC1-222ENST00000523555 JOSD1Q15040 202 aaPredicted RBP5.42□□□□□ -1.54
PABPC1-222ENST00000523555 IFITM1P13164 125 aa5.41□□□□□ -1.54
PABPC1-222ENST00000523555 ELOF1P60002 83 aaKnown RBP5.41□□□□□ -1.54
PABPC1-222ENST00000523555 LINC00518Q8N0U6 118 aa5.41□□□□□ -1.54
PABPC1-222ENST00000523555 COX7BP24311 80 aa5.4□□□□□ -1.54
PABPC1-222ENST00000523555 SPAG11AQ6PDA7 123 aa5.4□□□□□ -1.54
PABPC1-222ENST00000523555 Q6ZVH6 145 aa5.4□□□□□ -1.54
PABPC1-222ENST00000523555 IGLV7-46A0A075B6I9 117 aa5.39□□□□□ -1.55
PABPC1-222ENST00000523555 A6NDN8 102 aa5.39□□□□□ -1.55
PABPC1-222ENST00000523555 SCGB1D1O95968 90 aa5.39□□□□□ -1.55
PABPC1-222ENST00000523555 HINT1P49773 126 aaPredicted RBP5.39□□□□□ -1.55
PABPC1-222ENST00000523555 C9orf153Q5TBE3 101 aa5.39□□□□□ -1.55
PABPC1-222ENST00000523555 SPRR1BP22528 89 aa5.38□□□□□ -1.55
PABPC1-222ENST00000523555 CTAG1AP78358 180 aa5.38□□□□□ -1.55
PABPC1-222ENST00000523555 C4orf48Q5BLP8 95 aa5.38□□□□□ -1.55
PABPC1-222ENST00000523555 SSBP3-AS1Q7Z2R9 100 aa5.38□□□□□ -1.55
PABPC1-222ENST00000523555 DHRS4-AS1Q9P1J3 65 aa5.38□□□□□ -1.55
PABPC1-222ENST00000523555 TMA7Q9Y2S6 64 aaKnown RBP5.38□□□□□ -1.55
PABPC1-222ENST00000523555 CBY1Q9Y3M2 126 aa5.38□□□□□ -1.55
PABPC1-222ENST00000523555 A4D1N5 150 aa5.37□□□□□ -1.55
PABPC1-222ENST00000523555 HSBP1L1C9JCN9 74 aa5.37□□□□□ -1.55
PABPC1-222ENST00000523555 SPINK1P00995 79 aa5.37□□□□□ -1.55
PABPC1-222ENST00000523555 LINC01547P58512 204 aaPredicted RBP5.37□□□□□ -1.55
PABPC1-222ENST00000523555 TPRXLQ17RH7 258 aa5.37□□□□□ -1.55
PABPC1-222ENST00000523555 Q8N377 158 aa5.37□□□□□ -1.55
PABPC1-222ENST00000523555 SMIM11BQ8TCY0 68 aa5.37□□□□□ -1.55
PABPC1-222ENST00000523555 DEFB105AQ8NG35 78 aa5.36□□□□□ -1.55
PABPC1-222ENST00000523555 COPS9Q8WXC6 57 aa5.36□□□□□ -1.55
PABPC1-222ENST00000523555 TRBV7-6A0A0J9YX20 115 aa5.35□□□□□ -1.55
PABPC1-222ENST00000523555 A0A1B0GWB2 263 aa5.35□□□□□ -1.55
PABPC1-222ENST00000523555 COX8AP10176 69 aa5.35□□□□□ -1.55
PABPC1-222ENST00000523555 Q1RN00 199 aa5.35□□□□□ -1.55
PABPC1-222ENST00000523555 SMIM29Q86T20 159 aa5.35□□□□□ -1.55
PABPC1-222ENST00000523555 C12orf57Q99622 126 aa5.35□□□□□ -1.55
PABPC1-222ENST00000523555 TRAV13-2A0A0B4J235 113 aa5.34□□□□□ -1.55
PABPC1-222ENST00000523555 A0A0G2JQZ4 141 aa5.34□□□□□ -1.55
PABPC1-222ENST00000523555 HRCT1Q6UXD1 115 aa5.34□□□□□ -1.55
PABPC1-222ENST00000523555 C14orf144Q96I85 54 aa5.34□□□□□ -1.55
PABPC1-222ENST00000523555 CDIP1Q9H305 208 aa5.34□□□□□ -1.55
PABPC1-222ENST00000523555 RPS29P62273 56 aaKnown RBP5.33□□□□□ -1.56
PABPC1-222ENST00000523555 TAL2Q16559 108 aa5.33□□□□□ -1.56
PABPC1-222ENST00000523555 KRTAP13-3Q3SY46 172 aa5.33□□□□□ -1.56
PABPC1-222ENST00000523555 FP248Q71RG6 208 aaPredicted RBP5.33□□□□□ -1.56
PABPC1-222ENST00000523555 PAM16Q9Y3D7 125 aa5.33□□□□□ -1.56
PABPC1-222ENST00000523555 FAT4Q6V0I7 4981 aa5.32□□□□□ -1.56
PABPC1-222ENST00000523555 IGLV5-48A0A075B6I7 105 aa5.32□□□□□ -1.56
PABPC1-222ENST00000523555 SPATA45Q537H7 98 aa5.32□□□□□ -1.56
PABPC1-222ENST00000523555 LAMTOR3Q9UHA4 124 aa5.32□□□□□ -1.56
PABPC1-222ENST00000523555 TEX49A0A1B0GTD5 131 aa5.31□□□□□ -1.56
PABPC1-222ENST00000523555 DLEU1O43261 78 aa5.31□□□□□ -1.56
PABPC1-222ENST00000523555 C2orf91Q6ZV80 131 aa5.31□□□□□ -1.56
PABPC1-222ENST00000523555 HIST1H4GQ99525 98 aa5.31□□□□□ -1.56
PABPC1-222ENST00000523555 SMIM6P0DI80 62 aa5.3□□□□□ -1.56
PABPC1-222ENST00000523555 LOC105371267A0A1B0GV96 52 aa5.29□□□□□ -1.56
PABPC1-222ENST00000523555 H7C2G1 150 aa5.29□□□□□ -1.56
PABPC1-222ENST00000523555 SLC25A20O43772 301 aa5.29□□□□□ -1.56
PABPC1-222ENST00000523555 SLC25A34Q6PIV7 304 aa5.29□□□□□ -1.56
PABPC1-222ENST00000523555 LINC00575Q6W349 94 aa5.29□□□□□ -1.56
PABPC1-222ENST00000523555 CFC1BP0CG36 223 aa5.28□□□□□ -1.56
PABPC1-222ENST00000523555 CFC1P0CG37 223 aa5.28□□□□□ -1.56
PABPC1-222ENST00000523555 SMCPP49901 116 aaPredicted RBP5.28□□□□□ -1.56
PABPC1-222ENST00000523555 PYY3Q5JQD4 70 aa5.28□□□□□ -1.56
PABPC1-222ENST00000523555 VAMP8Q9BV40 100 aa5.28□□□□□ -1.56
PABPC1-222ENST00000523555 Q6ZQY7 126 aa5.27□□□□□ -1.57
PABPC1-222ENST00000523555 HIGD1BQ9P298 99 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms