RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 SLC25A20O43772 301 aa10.97□□□□□ -0.65
PABPC1-215ENST00000520804 EIF4EBP3O60516 100 aaPredicted RBP10.96□□□□□ -0.65
PABPC1-215ENST00000520804 SEC61BP60468 96 aaKnown RBP10.96□□□□□ -0.65
PABPC1-215ENST00000520804 ADAMTSL4-AS1Q5T5F5 129 aa10.96□□□□□ -0.65
PABPC1-215ENST00000520804 A0A0J9YXY3 114 aa10.95□□□□□ -0.66
PABPC1-215ENST00000520804 ZNF73O43830 326 aaPredicted RBP10.95□□□□□ -0.66
PABPC1-215ENST00000520804 NPC2P61916 151 aa10.95□□□□□ -0.66
PABPC1-215ENST00000520804 C9orf153Q5TBE3 101 aa10.94□□□□□ -0.66
PABPC1-215ENST00000520804 KRTAP4-1Q9BYQ7 146 aa10.94□□□□□ -0.66
PABPC1-215ENST00000520804 E9PLD3 99 aa10.93□□□□□ -0.66
PABPC1-215ENST00000520804 ST20-AS1Q8NBB2 130 aa10.92□□□□□ -0.66
PABPC1-215ENST00000520804 C5orf52A6NGY3 159 aa10.91□□□□□ -0.66
PABPC1-215ENST00000520804 COLCA2A8K830 154 aa10.9□□□□□ -0.66
PABPC1-215ENST00000520804 CBY1Q9Y3M2 126 aa10.9□□□□□ -0.66
PABPC1-215ENST00000520804 HINT1P49773 126 aaPredicted RBP10.89□□□□□ -0.67
PABPC1-215ENST00000520804 LINC01547P58512 204 aaPredicted RBP10.89□□□□□ -0.67
PABPC1-215ENST00000520804 XP32Q5T750 250 aa10.88□□□□□ -0.67
PABPC1-215ENST00000520804 LITAFQ99732 161 aa10.87□□□□□ -0.67
PABPC1-215ENST00000520804 SPANXCQ9NY87 97 aa10.87□□□□□ -0.67
PABPC1-215ENST00000520804 KRTAP9-6A0A140TA67 174 aa10.86□□□□□ -0.67
PABPC1-215ENST00000520804 LINC00308Q8TCZ7 52 aa10.86□□□□□ -0.67
PABPC1-215ENST00000520804 SYS1-DBNDD2H3BUS1 97 aa10.85□□□□□ -0.67
PABPC1-215ENST00000520804 SPRR1BP22528 89 aa10.85□□□□□ -0.67
PABPC1-215ENST00000520804 TIMM17BO60830 172 aa10.84□□□□□ -0.67
PABPC1-215ENST00000520804 OR13C6PQ8NH95 151 aa10.84□□□□□ -0.67
PABPC1-215ENST00000520804 SLC7A5P1Q8MH63 180 aa10.82□□□□□ -0.68
PABPC1-215ENST00000520804 DHRS4-AS1Q9P1J3 65 aa10.82□□□□□ -0.68
PABPC1-215ENST00000520804 SLC25A34Q6PIV7 304 aa10.81□□□□□ -0.68
PABPC1-215ENST00000520804 LINC01545Q5VT33 79 aa10.8□□□□□ -0.68
PABPC1-215ENST00000520804 SPANXDQ9BXN6 97 aa10.8□□□□□ -0.68
PABPC1-215ENST00000520804 LIMD2Q9BT23 127 aa10.79□□□□□ -0.68
PABPC1-215ENST00000520804 ZNF815PA8K554 130 aa10.78□□□□□ -0.68
PABPC1-215ENST00000520804 HRCT1Q6UXD1 115 aa10.78□□□□□ -0.68
PABPC1-215ENST00000520804 LAMTOR3Q9UHA4 124 aa10.78□□□□□ -0.68
PABPC1-215ENST00000520804 HIST1H2BKO60814 126 aa10.77□□□□□ -0.69
PABPC1-215ENST00000520804 HIST1H2BJP06899 126 aa10.77□□□□□ -0.69
PABPC1-215ENST00000520804 HIST1H2BOP23527 126 aa10.77□□□□□ -0.69
PABPC1-215ENST00000520804 HIST1H2BBP33778 126 aa10.77□□□□□ -0.69
PABPC1-215ENST00000520804 HIST1H2BDP58876 126 aa10.77□□□□□ -0.69
PABPC1-215ENST00000520804 ELOF1P60002 83 aaKnown RBP10.77□□□□□ -0.69
PABPC1-215ENST00000520804 HIST1H2BCP62807 126 aa10.77□□□□□ -0.69
PABPC1-215ENST00000520804 HIST2H2BEQ16778 126 aa10.77□□□□□ -0.69
PABPC1-215ENST00000520804 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.77□□□□□ -0.69
PABPC1-215ENST00000520804 PET117Q6UWS5 81 aa10.77□□□□□ -0.69
PABPC1-215ENST00000520804 HIST1H2BHQ93079 126 aa10.77□□□□□ -0.69
PABPC1-215ENST00000520804 HIST1H2BNQ99877 126 aa10.77□□□□□ -0.69
PABPC1-215ENST00000520804 HIST1H2BMQ99879 126 aa10.77□□□□□ -0.69
PABPC1-215ENST00000520804 COX7BP24311 80 aa10.76□□□□□ -0.69
PABPC1-215ENST00000520804 C6orf99Q4VX62 202 aa10.75□□□□□ -0.69
PABPC1-215ENST00000520804 LINC00518Q8N0U6 118 aa10.75□□□□□ -0.69
PABPC1-215ENST00000520804 TTTY13Q9BZ97 58 aa10.75□□□□□ -0.69
PABPC1-215ENST00000520804 TAL2Q16559 108 aa10.72□□□□□ -0.69
PABPC1-215ENST00000520804 LCE2CQ5TA81 110 aa10.71□□□□□ -0.69
PABPC1-215ENST00000520804 DEFB105AQ8NG35 78 aa10.71□□□□□ -0.69
PABPC1-215ENST00000520804 C3orf79P0CE67 100 aa10.7□□□□□ -0.7
PABPC1-215ENST00000520804 CD164Q04900 197 aa10.7□□□□□ -0.7
PABPC1-215ENST00000520804 Q1RN00 199 aa10.7□□□□□ -0.7
PABPC1-215ENST00000520804 LCE2DQ5TA82 110 aaPredicted RBP10.7□□□□□ -0.7
PABPC1-215ENST00000520804 TEX49A0A1B0GTD5 131 aa10.69□□□□□ -0.7
PABPC1-215ENST00000520804 C9orf92A6NGG3 77 aa10.69□□□□□ -0.7
PABPC1-215ENST00000520804 PRO1933Q9H354 126 aa10.69□□□□□ -0.7
PABPC1-215ENST00000520804 TRBV7-6A0A0J9YX20 115 aa10.68□□□□□ -0.7
PABPC1-215ENST00000520804 PCOTHQ58A44 107 aa10.68□□□□□ -0.7
PABPC1-215ENST00000520804 KRTAP19-2Q3LHN2 52 aa10.67□□□□□ -0.7
PABPC1-215ENST00000520804 SCGB1D4Q6XE38 83 aa10.66□□□□□ -0.7
PABPC1-215ENST00000520804 SMIM29Q86T20 159 aa10.66□□□□□ -0.7
PABPC1-215ENST00000520804 IGLV8-61A0A075B6I0 122 aa10.65□□□□□ -0.7
PABPC1-215ENST00000520804 A0A1B0GWB2 263 aa10.65□□□□□ -0.7
PABPC1-215ENST00000520804 H7C2G1 150 aa10.65□□□□□ -0.7
PABPC1-215ENST00000520804 KRTDAPP60985 99 aa10.65□□□□□ -0.7
PABPC1-215ENST00000520804 Q5XG85 94 aa10.64□□□□□ -0.71
PABPC1-215ENST00000520804 COPS9Q8WXC6 57 aa10.64□□□□□ -0.71
PABPC1-215ENST00000520804 IGLV5-48A0A075B6I7 105 aa10.63□□□□□ -0.71
PABPC1-215ENST00000520804 IFITM1P13164 125 aa10.63□□□□□ -0.71
PABPC1-215ENST00000520804 AKR1D1P51857 326 aa10.63□□□□□ -0.71
PABPC1-215ENST00000520804 A6NDN8 102 aa10.62□□□□□ -0.71
PABPC1-215ENST00000520804 ANKRD39Q53RE8 183 aa10.62□□□□□ -0.71
PABPC1-215ENST00000520804 COA6Q5JTJ3 125 aaKnown RBP10.62□□□□□ -0.71
PABPC1-215ENST00000520804 Q6ZVH6 145 aa10.6□□□□□ -0.71
PABPC1-215ENST00000520804 C20orf202A1L168 122 aa10.59□□□□□ -0.71
PABPC1-215ENST00000520804 MT1HP80294 61 aa10.59□□□□□ -0.71
PABPC1-215ENST00000520804 C1orf195Q5TG92 126 aa10.59□□□□□ -0.71
PABPC1-215ENST00000520804 MUSTN1Q8IVN3 82 aa10.59□□□□□ -0.71
PABPC1-215ENST00000520804 A0A0G2JQZ4 141 aa10.58□□□□□ -0.72
PABPC1-215ENST00000520804 FSIP2Q5CZC0 6907 aa10.57□□□□□ -0.72
PABPC1-215ENST00000520804 A4D1N5 150 aa10.57□□□□□ -0.72
PABPC1-215ENST00000520804 ATOH7Q8N100 152 aa10.56□□□□□ -0.72
PABPC1-215ENST00000520804 PCP2Q8IVA1 136 aa10.55□□□□□ -0.72
PABPC1-215ENST00000520804 SMIM11BQ8TCY0 68 aa10.54□□□□□ -0.72
PABPC1-215ENST00000520804 NHP2Q9NX24 153 aaKnown RBP10.54□□□□□ -0.72
PABPC1-215ENST00000520804 TRAV13-2A0A0B4J235 113 aa10.53□□□□□ -0.72
PABPC1-215ENST00000520804 CFC1BP0CG36 223 aa10.52□□□□□ -0.73
PABPC1-215ENST00000520804 RPL37P61927 97 aaKnown RBP10.51□□□□□ -0.73
PABPC1-215ENST00000520804 CRCT1Q9UGL9 99 aa10.51□□□□□ -0.73
PABPC1-215ENST00000520804 TCL1BO95988 128 aa10.48□□□□□ -0.73
PABPC1-215ENST00000520804 SNRPEP62304 92 aaKnown RBP10.46□□□□□ -0.73
PABPC1-215ENST00000520804 F8WEM9 126 aa10.45□□□□□ -0.74
PABPC1-215ENST00000520804 VAMP3Q15836 100 aa10.44□□□□□ -0.74
PABPC1-215ENST00000520804 LORP23490 312 aaPredicted RBP10.43□□□□□ -0.74
PABPC1-215ENST00000520804 LINC00575Q6W349 94 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 372.3 ms