RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 HIST1H2BCP62807 126 aa8.51□□□□□ -1.05
CSMD1-207ENST00000520451 HIST2H2BEQ16778 126 aa8.51□□□□□ -1.05
CSMD1-207ENST00000520451 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-207ENST00000520451 S100A7L2Q5SY68 101 aa8.51□□□□□ -1.05
CSMD1-207ENST00000520451 HIST1H2BHQ93079 126 aa8.51□□□□□ -1.05
CSMD1-207ENST00000520451 HIST1H2BNQ99877 126 aa8.51□□□□□ -1.05
CSMD1-207ENST00000520451 HIST1H2BMQ99879 126 aa8.51□□□□□ -1.05
CSMD1-207ENST00000520451 PMCHL2Q9BQD1 86 aa8.51□□□□□ -1.05
CSMD1-207ENST00000520451 HSPB8Q9UJY1 196 aa8.51□□□□□ -1.05
CSMD1-207ENST00000520451 LOC105371267A0A1B0GV96 52 aa8.5□□□□□ -1.05
CSMD1-207ENST00000520451 IGLV6-57P01721 117 aa8.5□□□□□ -1.05
CSMD1-207ENST00000520451 FABP4P15090 132 aa8.5□□□□□ -1.05
CSMD1-207ENST00000520451 RPS29P62273 56 aaKnown RBP8.5□□□□□ -1.05
CSMD1-207ENST00000520451 Q8N377 158 aa8.5□□□□□ -1.05
CSMD1-207ENST00000520451 TRAV23DV6A0A075B6W5 121 aa8.49□□□□□ -1.05
CSMD1-207ENST00000520451 NDUFC2O95298 119 aa8.49□□□□□ -1.05
CSMD1-207ENST00000520451 ANKRD39Q53RE8 183 aa8.49□□□□□ -1.05
CSMD1-207ENST00000520451 IGKCP01834 107 aa8.48□□□□□ -1.05
CSMD1-207ENST00000520451 SEC61BP60468 96 aaKnown RBP8.48□□□□□ -1.05
CSMD1-207ENST00000520451 NPC2P61916 151 aa8.48□□□□□ -1.05
CSMD1-207ENST00000520451 JOSD1Q15040 202 aaPredicted RBP8.48□□□□□ -1.05
CSMD1-207ENST00000520451 C9orf153Q5TBE3 101 aa8.48□□□□□ -1.05
CSMD1-207ENST00000520451 SLC25A20O43772 301 aa8.47□□□□□ -1.05
CSMD1-207ENST00000520451 A6NJY4 79 aa8.46□□□□□ -1.06
CSMD1-207ENST00000520451 ZNF73O43830 326 aaPredicted RBP8.46□□□□□ -1.06
CSMD1-207ENST00000520451 COA6Q5JTJ3 125 aaKnown RBP8.46□□□□□ -1.06
CSMD1-207ENST00000520451 SOSTDC1Q6X4U4 206 aa8.46□□□□□ -1.06
CSMD1-207ENST00000520451 EIF4EBP3O60516 100 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-207ENST00000520451 KRTAP4-1Q9BYQ7 146 aa8.45□□□□□ -1.06
CSMD1-207ENST00000520451 A0A0J9YXY3 114 aa8.44□□□□□ -1.06
CSMD1-207ENST00000520451 C5orf52A6NGY3 159 aa8.44□□□□□ -1.06
CSMD1-207ENST00000520451 ADAMTSL4-AS1Q5T5F5 129 aa8.44□□□□□ -1.06
CSMD1-207ENST00000520451 ST20-AS1Q8NBB2 130 aa8.44□□□□□ -1.06
CSMD1-207ENST00000520451 LINC01547P58512 204 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-207ENST00000520451 KRTAP9-6A0A140TA67 174 aa8.42□□□□□ -1.06
CSMD1-207ENST00000520451 E9PLD3 99 aa8.41□□□□□ -1.06
CSMD1-207ENST00000520451 HINT1P49773 126 aaPredicted RBP8.41□□□□□ -1.06
CSMD1-207ENST00000520451 SNRPEP62304 92 aaKnown RBP8.41□□□□□ -1.06
CSMD1-207ENST00000520451 XP32Q5T750 250 aa8.41□□□□□ -1.06
CSMD1-207ENST00000520451 CBY1Q9Y3M2 126 aa8.41□□□□□ -1.06
CSMD1-207ENST00000520451 HIST3H2BBQ8N257 126 aa8.38□□□□□ -1.07
CSMD1-207ENST00000520451 OR13C6PQ8NH95 151 aa8.38□□□□□ -1.07
CSMD1-207ENST00000520451 LINC00308Q8TCZ7 52 aa8.38□□□□□ -1.07
CSMD1-207ENST00000520451 SPANXCQ9NY87 97 aa8.38□□□□□ -1.07
CSMD1-207ENST00000520451 LITAFQ99732 161 aa8.37□□□□□ -1.07
CSMD1-207ENST00000520451 DHRS4-AS1Q9P1J3 65 aa8.36□□□□□ -1.07
CSMD1-207ENST00000520451 SYS1-DBNDD2H3BUS1 97 aa8.35□□□□□ -1.07
CSMD1-207ENST00000520451 TIMM17BO60830 172 aa8.35□□□□□ -1.07
CSMD1-207ENST00000520451 SPRR1BP22528 89 aa8.35□□□□□ -1.07
CSMD1-207ENST00000520451 SLC25A34Q6PIV7 304 aa8.35□□□□□ -1.07
CSMD1-207ENST00000520451 HRCT1Q6UXD1 115 aa8.35□□□□□ -1.07
CSMD1-207ENST00000520451 LIMD2Q9BT23 127 aa8.34□□□□□ -1.07
CSMD1-207ENST00000520451 HIST1H2BLQ99880 126 aa8.33□□□□□ -1.08
CSMD1-207ENST00000520451 SPANXDQ9BXN6 97 aa8.33□□□□□ -1.08
CSMD1-207ENST00000520451 LAMTOR3Q9UHA4 124 aa8.33□□□□□ -1.08
CSMD1-207ENST00000520451 ZNF815PA8K554 130 aa8.32□□□□□ -1.08
CSMD1-207ENST00000520451 LINC01545Q5VT33 79 aa8.32□□□□□ -1.08
CSMD1-207ENST00000520451 COX7BP24311 80 aa8.31□□□□□ -1.08
CSMD1-207ENST00000520451 ELOF1P60002 83 aaKnown RBP8.3□□□□□ -1.08
CSMD1-207ENST00000520451 C6orf99Q4VX62 202 aa8.3□□□□□ -1.08
CSMD1-207ENST00000520451 TTTY13Q9BZ97 58 aa8.3□□□□□ -1.08
CSMD1-207ENST00000520451 C9orf92A6NGG3 77 aa8.29□□□□□ -1.08
CSMD1-207ENST00000520451 S100A2P29034 98 aa8.29□□□□□ -1.08
CSMD1-207ENST00000520451 PET117Q6UWS5 81 aa8.29□□□□□ -1.08
CSMD1-207ENST00000520451 LINC00518Q8N0U6 118 aa8.29□□□□□ -1.08
CSMD1-207ENST00000520451 TAL2Q16559 108 aa8.28□□□□□ -1.08
CSMD1-207ENST00000520451 Q1RN00 199 aa8.28□□□□□ -1.08
CSMD1-207ENST00000520451 PCOTHQ58A44 107 aa8.28□□□□□ -1.08
CSMD1-207ENST00000520451 DEFB105AQ8NG35 78 aa8.28□□□□□ -1.08
CSMD1-207ENST00000520451 LCE2DQ5TA82 110 aaPredicted RBP8.27□□□□□ -1.09
CSMD1-207ENST00000520451 LCE2CQ5TA81 110 aa8.26□□□□□ -1.09
CSMD1-207ENST00000520451 TEX49A0A1B0GTD5 131 aa8.25□□□□□ -1.09
CSMD1-207ENST00000520451 CD164Q04900 197 aa8.25□□□□□ -1.09
CSMD1-207ENST00000520451 PRO1933Q9H354 126 aa8.25□□□□□ -1.09
CSMD1-207ENST00000520451 IGLV8-61A0A075B6I0 122 aa8.24□□□□□ -1.09
CSMD1-207ENST00000520451 C3orf79P0CE67 100 aa8.24□□□□□ -1.09
CSMD1-207ENST00000520451 TRBV7-6A0A0J9YX20 115 aa8.23□□□□□ -1.09
CSMD1-207ENST00000520451 H7C2G1 150 aa8.23□□□□□ -1.09
CSMD1-207ENST00000520451 SCGB1D4Q6XE38 83 aa8.23□□□□□ -1.09
CSMD1-207ENST00000520451 AKR1D1P51857 326 aa8.22□□□□□ -1.09
CSMD1-207ENST00000520451 KRTAP19-2Q3LHN2 52 aa8.22□□□□□ -1.09
CSMD1-207ENST00000520451 A0A1B0GWB2 263 aa8.21□□□□□ -1.1
CSMD1-207ENST00000520451 KRTDAPP60985 99 aa8.21□□□□□ -1.1
CSMD1-207ENST00000520451 COPS9Q8WXC6 57 aa8.21□□□□□ -1.1
CSMD1-207ENST00000520451 A6NDN8 102 aa8.2□□□□□ -1.1
CSMD1-207ENST00000520451 PYY3Q5JQD4 70 aa8.2□□□□□ -1.1
CSMD1-207ENST00000520451 SMIM29Q86T20 159 aa8.2□□□□□ -1.1
CSMD1-207ENST00000520451 IFITM1P13164 125 aa8.19□□□□□ -1.1
CSMD1-207ENST00000520451 MT1HP80294 61 aa8.19□□□□□ -1.1
CSMD1-207ENST00000520451 Q5XG85 94 aa8.19□□□□□ -1.1
CSMD1-207ENST00000520451 IGLV5-48A0A075B6I7 105 aa8.18□□□□□ -1.1
CSMD1-207ENST00000520451 A0A0G2JQZ4 141 aa8.18□□□□□ -1.1
CSMD1-207ENST00000520451 C1orf195Q5TG92 126 aa8.18□□□□□ -1.1
CSMD1-207ENST00000520451 C20orf202A1L168 122 aa8.17□□□□□ -1.1
CSMD1-207ENST00000520451 SMIM6P0DI80 62 aa8.16□□□□□ -1.1
CSMD1-207ENST00000520451 Q6ZVH6 145 aa8.16□□□□□ -1.1
CSMD1-207ENST00000520451 MUSTN1Q8IVN3 82 aa8.16□□□□□ -1.1
CSMD1-207ENST00000520451 A4D1N5 150 aa8.15□□□□□ -1.1
CSMD1-207ENST00000520451 ATOH7Q8N100 152 aa8.15□□□□□ -1.1
CSMD1-207ENST00000520451 CFC1BP0CG36 223 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms