RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	HIST1H2BH	Q93079	126 aa		4.14	□□□□□ -1.75
SDCBP-208	ENST00000520228	HIST1H2BN	Q99877	126 aa		4.14	□□□□□ -1.75
SDCBP-208	ENST00000520228	HIST1H2BM	Q99879	126 aa		4.14	□□□□□ -1.75
SDCBP-208	ENST00000520228	XAGE1A	Q9HD64	81 aa		4.14	□□□□□ -1.75
SDCBP-208	ENST00000520228	TMEM223	A0PJW6	202 aa		4.13	□□□□□ -1.75
SDCBP-208	ENST00000520228		M0QXV9	152 aa		4.13	□□□□□ -1.75
SDCBP-208	ENST00000520228	OXT	P01178	125 aa		4.13	□□□□□ -1.75
SDCBP-208	ENST00000520228	PLN	P26678	52 aa		4.12	□□□□□ -1.75
SDCBP-208	ENST00000520228	PFN2	P35080	140 aa		4.12	□□□□□ -1.75
SDCBP-208	ENST00000520228	UBE2B	P63146	152 aa		4.12	□□□□□ -1.75
SDCBP-208	ENST00000520228	SFTA2	Q6UW10	78 aa		4.12	□□□□□ -1.75
SDCBP-208	ENST00000520228	ZNF625	Q96I27	306 aa	Predicted RBP	4.12	□□□□□ -1.75
SDCBP-208	ENST00000520228	HIST1H4G	Q99525	98 aa		4.12	□□□□□ -1.75
SDCBP-208	ENST00000520228	MAP1LC3C	Q9BXW4	147 aa		4.12	□□□□□ -1.75
SDCBP-208	ENST00000520228	PSORS1C2	Q9UIG4	136 aa		4.12	□□□□□ -1.75
SDCBP-208	ENST00000520228	ERG28	Q9UKR5	140 aa		4.12	□□□□□ -1.75
SDCBP-208	ENST00000520228	DPM2	O94777	84 aa		4.11	□□□□□ -1.75
SDCBP-208	ENST00000520228	COX17	Q14061	63 aa		4.11	□□□□□ -1.75
SDCBP-208	ENST00000520228	C1orf137	Q5JT78	98 aa		4.11	□□□□□ -1.75
SDCBP-208	ENST00000520228	SPINK6	Q6UWN8	80 aa		4.11	□□□□□ -1.75
SDCBP-208	ENST00000520228	C22orf24	Q9Y442	160 aa		4.11	□□□□□ -1.75
SDCBP-208	ENST00000520228	IGKC	P01834	107 aa		4.1	□□□□□ -1.75
SDCBP-208	ENST00000520228	LINC00158	P58513	81 aa		4.1	□□□□□ -1.75
SDCBP-208	ENST00000520228	PMCHL2	Q9BQD1	86 aa		4.1	□□□□□ -1.75
SDCBP-208	ENST00000520228	SND1-IT1	Q9HBX3	110 aa		4.1	□□□□□ -1.75
SDCBP-208	ENST00000520228	TP73-AS1	Q9UF72	201 aa		4.1	□□□□□ -1.75
SDCBP-208	ENST00000520228	SYS1-DBNDD2	H3BUS1	97 aa		4.09	□□□□□ -1.75
SDCBP-208	ENST00000520228	IGLV7-43	P04211	117 aa		4.09	□□□□□ -1.75
SDCBP-208	ENST00000520228	HERVK_113	P61574	105 aa		4.09	□□□□□ -1.75
SDCBP-208	ENST00000520228	COA6	Q5JTJ3	125 aa	Known RBP	4.09	□□□□□ -1.75
SDCBP-208	ENST00000520228	MRPL55	Q7Z7F7	128 aa	Known RBP	4.09	□□□□□ -1.75
SDCBP-208	ENST00000520228	PLEKHB2	Q96CS7	222 aa		4.09	□□□□□ -1.75
SDCBP-208	ENST00000520228	NDUFA12	Q9UI09	145 aa		4.09	□□□□□ -1.75
SDCBP-208	ENST00000520228	MYMX	A0A1B0GTQ4	84 aa		4.08	□□□□□ -1.76
SDCBP-208	ENST00000520228	LINC00587	B1AMM8	73 aa		4.08	□□□□□ -1.76
SDCBP-208	ENST00000520228	LEPROT	O15243	131 aa		4.08	□□□□□ -1.76
SDCBP-208	ENST00000520228		J3QQQ9	107 aa		4.07	□□□□□ -1.76
SDCBP-208	ENST00000520228	SMIM13	P0DJ93	91 aa		4.07	□□□□□ -1.76
SDCBP-208	ENST00000520228	LGALS3	P17931	250 aa	Known RBP	4.07	□□□□□ -1.76
SDCBP-208	ENST00000520228	TSPEAR-AS2	P59090	65 aa		4.07	□□□□□ -1.76
SDCBP-208	ENST00000520228	MEIG1	Q5JSS6	88 aa		4.07	□□□□□ -1.76
SDCBP-208	ENST00000520228		Q8N9L7	120 aa		4.07	□□□□□ -1.76
SDCBP-208	ENST00000520228	DIRC1	Q969H9	104 aa		4.07	□□□□□ -1.76
SDCBP-208	ENST00000520228	LRP1	Q07954	4544 aa	Known RBP	4.06	□□□□□ -1.76
SDCBP-208	ENST00000520228	C3orf79	P0CE67	100 aa		4.06	□□□□□ -1.76
SDCBP-208	ENST00000520228	NMU	P48645	174 aa		4.06	□□□□□ -1.76
SDCBP-208	ENST00000520228	KRTDAP	P60985	99 aa		4.06	□□□□□ -1.76
SDCBP-208	ENST00000520228	LINC01545	Q5VT33	79 aa		4.06	□□□□□ -1.76
SDCBP-208	ENST00000520228	LINC01600	Q96MT4	127 aa		4.06	□□□□□ -1.76
SDCBP-208	ENST00000520228	BCE1	O60756	84 aa		4.05	□□□□□ -1.76
SDCBP-208	ENST00000520228	MT1HL1	P0DM35	61 aa		4.05	□□□□□ -1.76
SDCBP-208	ENST00000520228	KRTAP13-3	Q3SY46	172 aa		4.05	□□□□□ -1.76
SDCBP-208	ENST00000520228	MIR7-3HG	Q8N6C7	128 aa		4.05	□□□□□ -1.76
SDCBP-208	ENST00000520228	IGLV1-50	A0A075B6I6	118 aa		4.04	□□□□□ -1.76
SDCBP-208	ENST00000520228	IGKV2-28	A0A075B6P5	120 aa		4.04	□□□□□ -1.76
SDCBP-208	ENST00000520228	C20orf202	A1L168	122 aa		4.04	□□□□□ -1.76
SDCBP-208	ENST00000520228	IGKV2D-28	P01615	120 aa		4.04	□□□□□ -1.76
SDCBP-208	ENST00000520228	RPL28	P46779	137 aa	Known RBP	4.04	□□□□□ -1.76
SDCBP-208	ENST00000520228	BOD1L2	Q8IYS8	172 aa		4.04	□□□□□ -1.76
SDCBP-208	ENST00000520228		Q8NDZ9	215 aa		4.04	□□□□□ -1.76
SDCBP-208	ENST00000520228	PRO0461	Q9UI25	63 aa		4.04	□□□□□ -1.76
SDCBP-208	ENST00000520228		M0R378	163 aa		4.03	□□□□□ -1.76
SDCBP-208	ENST00000520228	KRTAP10-8	P60410	259 aa		4.03	□□□□□ -1.76
SDCBP-208	ENST00000520228	DAND5	Q8N907	189 aa		4.03	□□□□□ -1.76
SDCBP-208	ENST00000520228	TMEM238	C9JI98	176 aa		4.02	□□□□□ -1.77
SDCBP-208	ENST00000520228	S100A6	P06703	90 aa		4.02	□□□□□ -1.77
SDCBP-208	ENST00000520228	S100A2	P29034	98 aa		4.02	□□□□□ -1.77
SDCBP-208	ENST00000520228	RPL13A	P40429	203 aa	Known RBP	4.02	□□□□□ -1.77
SDCBP-208	ENST00000520228	UBE2A	P49459	152 aa		4.02	□□□□□ -1.77
SDCBP-208	ENST00000520228	AKR1D1	P51857	326 aa		4.02	□□□□□ -1.77
SDCBP-208	ENST00000520228	HIST3H2BB	Q8N257	126 aa		4.02	□□□□□ -1.77
SDCBP-208	ENST00000520228	MIEN1	Q9BRT3	115 aa		4.02	□□□□□ -1.77
SDCBP-208	ENST00000520228	FAT3	Q8TDW7	4589 aa		4.01	□□□□□ -1.77
SDCBP-208	ENST00000520228	IGKV2D-26	A0A0A0MRZ7	120 aa		4.01	□□□□□ -1.77
SDCBP-208	ENST00000520228	LOC107984156	A0A0G2JMH3	177 aa		4.01	□□□□□ -1.77
SDCBP-208	ENST00000520228	NCR3	O14931	201 aa		4.01	□□□□□ -1.77
SDCBP-208	ENST00000520228	ARL17A	Q8IVW1	177 aa		4.01	□□□□□ -1.77
SDCBP-208	ENST00000520228	ATOH7	Q8N100	152 aa		4.01	□□□□□ -1.77
SDCBP-208	ENST00000520228	HIST1H2BL	Q99880	126 aa		4.01	□□□□□ -1.77
SDCBP-208	ENST00000520228	TMEM126A	Q9H061	195 aa		4.01	□□□□□ -1.77
SDCBP-208	ENST00000520228	PKHD1L1	Q86WI1	4243 aa		4	□□□□□ -1.77
SDCBP-208	ENST00000520228	ZNF815P	A8K554	130 aa		4	□□□□□ -1.77
SDCBP-208	ENST00000520228	FAM19A1	Q7Z5A9	133 aa		4	□□□□□ -1.77
SDCBP-208	ENST00000520228	KRTAP13-1	Q8IUC0	172 aa		4	□□□□□ -1.77
SDCBP-208	ENST00000520228	TRBV10-3	A0A0K0K1G6	114 aa		3.99	□□□□□ -1.77
SDCBP-208	ENST00000520228	TRBV10-2	A0A0K0K1G8	114 aa		3.99	□□□□□ -1.77
SDCBP-208	ENST00000520228	TIMM17B	O60830	172 aa		3.99	□□□□□ -1.77
SDCBP-208	ENST00000520228	NPC2	P61916	151 aa		3.99	□□□□□ -1.77
SDCBP-208	ENST00000520228	S100A12	P80511	92 aa		3.99	□□□□□ -1.77
SDCBP-208	ENST00000520228	PRLH	P81277	87 aa		3.99	□□□□□ -1.77
SDCBP-208	ENST00000520228	TTTY13	Q9BZ97	58 aa		3.99	□□□□□ -1.77
SDCBP-208	ENST00000520228	KCNQ1DN	Q9H478	68 aa		3.99	□□□□□ -1.77
SDCBP-208	ENST00000520228	SPANXB1	Q9NS25	103 aa	Predicted RBP	3.99	□□□□□ -1.77
SDCBP-208	ENST00000520228	NDUFC2	O95298	119 aa		3.98	□□□□□ -1.77
SDCBP-208	ENST00000520228	DDT	P30046	118 aa		3.98	□□□□□ -1.77
SDCBP-208	ENST00000520228	S100A7L2	Q5SY68	101 aa		3.98	□□□□□ -1.77
SDCBP-208	ENST00000520228	SOSTDC1	Q6X4U4	206 aa		3.98	□□□□□ -1.77
SDCBP-208	ENST00000520228	SCGB1D4	Q6XE38	83 aa		3.98	□□□□□ -1.77
SDCBP-208	ENST00000520228	LINC00308	Q8TCZ7	52 aa		3.98	□□□□□ -1.77
SDCBP-208	ENST00000520228	ETDC	A0A1B0GVM5	59 aa		3.97	□□□□□ -1.77

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