RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 MIEN1Q9BRT3 115 aa6.96□□□□□ -1.3
CSMD1-205ENST00000519623 A0A0J9YXY3 114 aa6.95□□□□□ -1.3
CSMD1-205ENST00000519623 KRTAP4-1Q9BYQ7 146 aa6.95□□□□□ -1.3
CSMD1-205ENST00000519623 TRAV23DV6A0A075B6W5 121 aa6.94□□□□□ -1.3
CSMD1-205ENST00000519623 NPC2P61916 151 aa6.94□□□□□ -1.3
CSMD1-205ENST00000519623 E9PLD3 99 aa6.93□□□□□ -1.3
CSMD1-205ENST00000519623 SLC25A20O43772 301 aa6.93□□□□□ -1.3
CSMD1-205ENST00000519623 ZNF73O43830 326 aaPredicted RBP6.93□□□□□ -1.3
CSMD1-205ENST00000519623 JOSD1Q15040 202 aaPredicted RBP6.93□□□□□ -1.3
CSMD1-205ENST00000519623 ST20-AS1Q8NBB2 130 aa6.93□□□□□ -1.3
CSMD1-205ENST00000519623 SLC7A5P1Q8MH63 180 aa6.92□□□□□ -1.3
CSMD1-205ENST00000519623 C5orf52A6NGY3 159 aa6.91□□□□□ -1.3
CSMD1-205ENST00000519623 LITAFQ99732 161 aa6.91□□□□□ -1.3
CSMD1-205ENST00000519623 SEC61BP60468 96 aaKnown RBP6.9□□□□□ -1.3
CSMD1-205ENST00000519623 SYS1-DBNDD2H3BUS1 97 aa6.89□□□□□ -1.31
CSMD1-205ENST00000519623 C9orf153Q5TBE3 101 aa6.89□□□□□ -1.31
CSMD1-205ENST00000519623 LINC00308Q8TCZ7 52 aa6.89□□□□□ -1.31
CSMD1-205ENST00000519623 SPRR1BP22528 89 aa6.88□□□□□ -1.31
CSMD1-205ENST00000519623 XP32Q5T750 250 aa6.88□□□□□ -1.31
CSMD1-205ENST00000519623 SPANXCQ9NY87 97 aa6.88□□□□□ -1.31
CSMD1-205ENST00000519623 TIMM17BO60830 172 aa6.87□□□□□ -1.31
CSMD1-205ENST00000519623 HINT1P49773 126 aaPredicted RBP6.87□□□□□ -1.31
CSMD1-205ENST00000519623 CBY1Q9Y3M2 126 aa6.87□□□□□ -1.31
CSMD1-205ENST00000519623 HIST1H2BKO60814 126 aa6.86□□□□□ -1.31
CSMD1-205ENST00000519623 HIST1H2BJP06899 126 aa6.86□□□□□ -1.31
CSMD1-205ENST00000519623 HIST1H2BOP23527 126 aa6.86□□□□□ -1.31
CSMD1-205ENST00000519623 HIST1H2BBP33778 126 aa6.86□□□□□ -1.31
CSMD1-205ENST00000519623 HIST1H2BDP58876 126 aa6.86□□□□□ -1.31
CSMD1-205ENST00000519623 HIST1H2BCP62807 126 aa6.86□□□□□ -1.31
CSMD1-205ENST00000519623 HIST2H2BEQ16778 126 aa6.86□□□□□ -1.31
CSMD1-205ENST00000519623 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.86□□□□□ -1.31
CSMD1-205ENST00000519623 LINC01545Q5VT33 79 aa6.86□□□□□ -1.31
CSMD1-205ENST00000519623 OR13C6PQ8NH95 151 aa6.86□□□□□ -1.31
CSMD1-205ENST00000519623 HIST1H2BHQ93079 126 aa6.86□□□□□ -1.31
CSMD1-205ENST00000519623 HIST1H2BNQ99877 126 aa6.86□□□□□ -1.31
CSMD1-205ENST00000519623 HIST1H2BMQ99879 126 aa6.86□□□□□ -1.31
CSMD1-205ENST00000519623 LINC01547P58512 204 aaPredicted RBP6.85□□□□□ -1.31
CSMD1-205ENST00000519623 PET117Q6UWS5 81 aa6.84□□□□□ -1.31
CSMD1-205ENST00000519623 TTTY13Q9BZ97 58 aa6.84□□□□□ -1.31
CSMD1-205ENST00000519623 DHRS4-AS1Q9P1J3 65 aa6.84□□□□□ -1.31
CSMD1-205ENST00000519623 KRTAP9-6A0A140TA67 174 aa6.83□□□□□ -1.32
CSMD1-205ENST00000519623 ZNF815PA8K554 130 aa6.83□□□□□ -1.32
CSMD1-205ENST00000519623 SPANXDQ9BXN6 97 aa6.83□□□□□ -1.32
CSMD1-205ENST00000519623 ELOF1P60002 83 aaKnown RBP6.82□□□□□ -1.32
CSMD1-205ENST00000519623 SLC25A34Q6PIV7 304 aa6.82□□□□□ -1.32
CSMD1-205ENST00000519623 LINC00518Q8N0U6 118 aa6.82□□□□□ -1.32
CSMD1-205ENST00000519623 C3orf79P0CE67 100 aa6.81□□□□□ -1.32
CSMD1-205ENST00000519623 COX7BP24311 80 aa6.81□□□□□ -1.32
CSMD1-205ENST00000519623 HRCT1Q6UXD1 115 aa6.81□□□□□ -1.32
CSMD1-205ENST00000519623 LAMTOR3Q9UHA4 124 aa6.81□□□□□ -1.32
CSMD1-205ENST00000519623 C6orf99Q4VX62 202 aa6.8□□□□□ -1.32
CSMD1-205ENST00000519623 LCE2CQ5TA81 110 aa6.8□□□□□ -1.32
CSMD1-205ENST00000519623 LIMD2Q9BT23 127 aa6.79□□□□□ -1.32
CSMD1-205ENST00000519623 TRBV7-6A0A0J9YX20 115 aa6.78□□□□□ -1.32
CSMD1-205ENST00000519623 TAL2Q16559 108 aa6.78□□□□□ -1.32
CSMD1-205ENST00000519623 DEFB105AQ8NG35 78 aa6.78□□□□□ -1.32
CSMD1-205ENST00000519623 TEX49A0A1B0GTD5 131 aa6.77□□□□□ -1.33
CSMD1-205ENST00000519623 CD164Q04900 197 aa6.77□□□□□ -1.33
CSMD1-205ENST00000519623 Q1RN00 199 aa6.77□□□□□ -1.33
CSMD1-205ENST00000519623 KRTAP19-2Q3LHN2 52 aa6.77□□□□□ -1.33
CSMD1-205ENST00000519623 COA6Q5JTJ3 125 aaKnown RBP6.77□□□□□ -1.33
CSMD1-205ENST00000519623 SMIM29Q86T20 159 aa6.77□□□□□ -1.33
CSMD1-205ENST00000519623 PCOTHQ58A44 107 aa6.76□□□□□ -1.33
CSMD1-205ENST00000519623 LCE2DQ5TA82 110 aaPredicted RBP6.76□□□□□ -1.33
CSMD1-205ENST00000519623 PRO1933Q9H354 126 aa6.76□□□□□ -1.33
CSMD1-205ENST00000519623 C9orf92A6NGG3 77 aa6.75□□□□□ -1.33
CSMD1-205ENST00000519623 KRTDAPP60985 99 aa6.75□□□□□ -1.33
CSMD1-205ENST00000519623 ANKRD39Q53RE8 183 aa6.75□□□□□ -1.33
CSMD1-205ENST00000519623 IFITM1P13164 125 aa6.74□□□□□ -1.33
CSMD1-205ENST00000519623 Q5XG85 94 aa6.74□□□□□ -1.33
CSMD1-205ENST00000519623 SCGB1D4Q6XE38 83 aa6.74□□□□□ -1.33
CSMD1-205ENST00000519623 IGLV5-48A0A075B6I7 105 aa6.73□□□□□ -1.33
CSMD1-205ENST00000519623 A0A1B0GWB2 263 aa6.73□□□□□ -1.33
CSMD1-205ENST00000519623 AKR1D1P51857 326 aa6.73□□□□□ -1.33
CSMD1-205ENST00000519623 MUSTN1Q8IVN3 82 aa6.73□□□□□ -1.33
CSMD1-205ENST00000519623 A0A0G2JQZ4 141 aa6.72□□□□□ -1.33
CSMD1-205ENST00000519623 A6NDN8 102 aa6.72□□□□□ -1.33
CSMD1-205ENST00000519623 H7C2G1 150 aa6.72□□□□□ -1.33
CSMD1-205ENST00000519623 C1orf195Q5TG92 126 aa6.72□□□□□ -1.33
CSMD1-205ENST00000519623 Q6ZVH6 145 aa6.72□□□□□ -1.33
CSMD1-205ENST00000519623 PCP2Q8IVA1 136 aa6.72□□□□□ -1.33
CSMD1-205ENST00000519623 COPS9Q8WXC6 57 aa6.72□□□□□ -1.33
CSMD1-205ENST00000519623 IGLV8-61A0A075B6I0 122 aa6.71□□□□□ -1.34
CSMD1-205ENST00000519623 ATOH7Q8N100 152 aa6.71□□□□□ -1.34
CSMD1-205ENST00000519623 C20orf202A1L168 122 aa6.69□□□□□ -1.34
CSMD1-205ENST00000519623 A4D1N5 150 aa6.69□□□□□ -1.34
CSMD1-205ENST00000519623 MT1HP80294 61 aa6.69□□□□□ -1.34
CSMD1-205ENST00000519623 SMIM11BQ8TCY0 68 aa6.69□□□□□ -1.34
CSMD1-205ENST00000519623 TRAV13-2A0A0B4J235 113 aa6.67□□□□□ -1.34
CSMD1-205ENST00000519623 NHP2Q9NX24 153 aaKnown RBP6.65□□□□□ -1.34
CSMD1-205ENST00000519623 SNRPEP62304 92 aaKnown RBP6.64□□□□□ -1.35
CSMD1-205ENST00000519623 RPL37P61927 97 aaKnown RBP6.63□□□□□ -1.35
CSMD1-205ENST00000519623 FSIP2Q5CZC0 6907 aa6.63□□□□□ -1.35
CSMD1-205ENST00000519623 LINC00575Q6W349 94 aa6.62□□□□□ -1.35
CSMD1-205ENST00000519623 CRCT1Q9UGL9 99 aa6.62□□□□□ -1.35
CSMD1-205ENST00000519623 TCL1BO95988 128 aa6.61□□□□□ -1.35
CSMD1-205ENST00000519623 VAMP3Q15836 100 aa6.61□□□□□ -1.35
CSMD1-205ENST00000519623 CFC1BP0CG36 223 aa6.6□□□□□ -1.35
CSMD1-205ENST00000519623 LORP23490 312 aaPredicted RBP6.6□□□□□ -1.35
CSMD1-205ENST00000519623 hADV29S1A0JD25 119 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 219.8 ms