RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 ST20-AS1Q8NBB2 130 aa9.66□□□□□ -0.86
CTNNA1-206ENST00000517980 TRAV23DV6A0A075B6W5 121 aa9.65□□□□□ -0.86
CTNNA1-206ENST00000517980 A0A0J9YXY3 114 aa9.65□□□□□ -0.86
CTNNA1-206ENST00000517980 NDUFC2O95298 119 aa9.65□□□□□ -0.86
CTNNA1-206ENST00000517980 C9orf153Q5TBE3 101 aa9.64□□□□□ -0.87
CTNNA1-206ENST00000517980 KRTAP9-6A0A140TA67 174 aa9.62□□□□□ -0.87
CTNNA1-206ENST00000517980 COLCA2A8K830 154 aa9.62□□□□□ -0.87
CTNNA1-206ENST00000517980 SLC25A20O43772 301 aa9.62□□□□□ -0.87
CTNNA1-206ENST00000517980 ZNF73O43830 326 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-206ENST00000517980 JOSD1Q15040 202 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-206ENST00000517980 SLC7A5P1Q8MH63 180 aa9.62□□□□□ -0.87
CTNNA1-206ENST00000517980 SEC61BP60468 96 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-206ENST00000517980 RPS29P62273 56 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-206ENST00000517980 E9PLD3 99 aa9.6□□□□□ -0.87
CTNNA1-206ENST00000517980 OR13C6PQ8NH95 151 aa9.59□□□□□ -0.87
CTNNA1-206ENST00000517980 HINT1P49773 126 aaPredicted RBP9.57□□□□□ -0.88
CTNNA1-206ENST00000517980 LINC01547P58512 204 aaPredicted RBP9.57□□□□□ -0.88
CTNNA1-206ENST00000517980 HRCT1Q6UXD1 115 aa9.57□□□□□ -0.88
CTNNA1-206ENST00000517980 LINC00308Q8TCZ7 52 aa9.56□□□□□ -0.88
CTNNA1-206ENST00000517980 LITAFQ99732 161 aa9.56□□□□□ -0.88
CTNNA1-206ENST00000517980 SYS1-DBNDD2H3BUS1 97 aa9.55□□□□□ -0.88
CTNNA1-206ENST00000517980 XP32Q5T750 250 aa9.54□□□□□ -0.88
CTNNA1-206ENST00000517980 TTTY13Q9BZ97 58 aa9.53□□□□□ -0.88
CTNNA1-206ENST00000517980 SPANXCQ9NY87 97 aa9.52□□□□□ -0.89
CTNNA1-206ENST00000517980 C5orf52A6NGY3 159 aa9.51□□□□□ -0.89
CTNNA1-206ENST00000517980 ZNF815PA8K554 130 aa9.5□□□□□ -0.89
CTNNA1-206ENST00000517980 DEFB105AQ8NG35 78 aa9.5□□□□□ -0.89
CTNNA1-206ENST00000517980 CBY1Q9Y3M2 126 aa9.5□□□□□ -0.89
CTNNA1-206ENST00000517980 HIST1H2BKO60814 126 aa9.49□□□□□ -0.89
CTNNA1-206ENST00000517980 TIMM17BO60830 172 aa9.49□□□□□ -0.89
CTNNA1-206ENST00000517980 HIST1H2BJP06899 126 aa9.49□□□□□ -0.89
CTNNA1-206ENST00000517980 SPRR1BP22528 89 aa9.49□□□□□ -0.89
CTNNA1-206ENST00000517980 HIST1H2BOP23527 126 aa9.49□□□□□ -0.89
CTNNA1-206ENST00000517980 HIST1H2BBP33778 126 aa9.49□□□□□ -0.89
CTNNA1-206ENST00000517980 HIST1H2BDP58876 126 aa9.49□□□□□ -0.89
CTNNA1-206ENST00000517980 HIST1H2BCP62807 126 aa9.49□□□□□ -0.89
CTNNA1-206ENST00000517980 HIST2H2BEQ16778 126 aa9.49□□□□□ -0.89
CTNNA1-206ENST00000517980 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-206ENST00000517980 LINC01545Q5VT33 79 aa9.49□□□□□ -0.89
CTNNA1-206ENST00000517980 HIST1H2BHQ93079 126 aa9.49□□□□□ -0.89
CTNNA1-206ENST00000517980 HIST1H2BNQ99877 126 aa9.49□□□□□ -0.89
CTNNA1-206ENST00000517980 HIST1H2BMQ99879 126 aa9.49□□□□□ -0.89
CTNNA1-206ENST00000517980 DHRS4-AS1Q9P1J3 65 aa9.49□□□□□ -0.89
CTNNA1-206ENST00000517980 C9orf92A6NGG3 77 aa9.48□□□□□ -0.89
CTNNA1-206ENST00000517980 LAMTOR3Q9UHA4 124 aa9.48□□□□□ -0.89
CTNNA1-206ENST00000517980 COX7BP24311 80 aa9.47□□□□□ -0.89
CTNNA1-206ENST00000517980 TAL2Q16559 108 aa9.47□□□□□ -0.89
CTNNA1-206ENST00000517980 C6orf99Q4VX62 202 aa9.47□□□□□ -0.89
CTNNA1-206ENST00000517980 SPANXDQ9BXN6 97 aa9.47□□□□□ -0.89
CTNNA1-206ENST00000517980 Q1RN00 199 aa9.46□□□□□ -0.9
CTNNA1-206ENST00000517980 SLC25A34Q6PIV7 304 aa9.46□□□□□ -0.9
CTNNA1-206ENST00000517980 PET117Q6UWS5 81 aa9.46□□□□□ -0.9
CTNNA1-206ENST00000517980 ELOF1P60002 83 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-206ENST00000517980 C3orf79P0CE67 100 aa9.44□□□□□ -0.9
CTNNA1-206ENST00000517980 PCOTHQ58A44 107 aa9.44□□□□□ -0.9
CTNNA1-206ENST00000517980 LCE2CQ5TA81 110 aa9.44□□□□□ -0.9
CTNNA1-206ENST00000517980 LINC00518Q8N0U6 118 aa9.44□□□□□ -0.9
CTNNA1-206ENST00000517980 LIMD2Q9BT23 127 aa9.44□□□□□ -0.9
CTNNA1-206ENST00000517980 H7C2G1 150 aa9.43□□□□□ -0.9
CTNNA1-206ENST00000517980 A0A0G2JQZ4 141 aa9.42□□□□□ -0.9
CTNNA1-206ENST00000517980 IGLV8-61A0A075B6I0 122 aa9.4□□□□□ -0.9
CTNNA1-206ENST00000517980 TEX49A0A1B0GTD5 131 aa9.4□□□□□ -0.9
CTNNA1-206ENST00000517980 KRTDAPP60985 99 aa9.4□□□□□ -0.9
CTNNA1-206ENST00000517980 SCGB1D4Q6XE38 83 aa9.39□□□□□ -0.91
CTNNA1-206ENST00000517980 SMIM29Q86T20 159 aa9.39□□□□□ -0.91
CTNNA1-206ENST00000517980 PRO1933Q9H354 126 aa9.39□□□□□ -0.91
CTNNA1-206ENST00000517980 KRTAP19-2Q3LHN2 52 aa9.38□□□□□ -0.91
CTNNA1-206ENST00000517980 LCE2DQ5TA82 110 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-206ENST00000517980 A6NDN8 102 aa9.37□□□□□ -0.91
CTNNA1-206ENST00000517980 ANKRD39Q53RE8 183 aa9.37□□□□□ -0.91
CTNNA1-206ENST00000517980 AKR1D1P51857 326 aa9.36□□□□□ -0.91
CTNNA1-206ENST00000517980 CD164Q04900 197 aa9.36□□□□□ -0.91
CTNNA1-206ENST00000517980 MUSTN1Q8IVN3 82 aa9.36□□□□□ -0.91
CTNNA1-206ENST00000517980 ATOH7Q8N100 152 aa9.36□□□□□ -0.91
CTNNA1-206ENST00000517980 TRBV7-6A0A0J9YX20 115 aa9.34□□□□□ -0.91
CTNNA1-206ENST00000517980 A0A1B0GWB2 263 aa9.34□□□□□ -0.91
CTNNA1-206ENST00000517980 C1orf195Q5TG92 126 aa9.34□□□□□ -0.91
CTNNA1-206ENST00000517980 FSIP2Q5CZC0 6907 aa9.34□□□□□ -0.91
CTNNA1-206ENST00000517980 PCP2Q8IVA1 136 aa9.33□□□□□ -0.92
CTNNA1-206ENST00000517980 IFITM1P13164 125 aa9.32□□□□□ -0.92
CTNNA1-206ENST00000517980 MT1HP80294 61 aa9.32□□□□□ -0.92
CTNNA1-206ENST00000517980 COA6Q5JTJ3 125 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-206ENST00000517980 IGLV5-48A0A075B6I7 105 aa9.3□□□□□ -0.92
CTNNA1-206ENST00000517980 SMIM11BQ8TCY0 68 aa9.29□□□□□ -0.92
CTNNA1-206ENST00000517980 COPS9Q8WXC6 57 aa9.29□□□□□ -0.92
CTNNA1-206ENST00000517980 C20orf202A1L168 122 aa9.28□□□□□ -0.92
CTNNA1-206ENST00000517980 Q5XG85 94 aa9.28□□□□□ -0.92
CTNNA1-206ENST00000517980 Q6ZVH6 145 aa9.27□□□□□ -0.93
CTNNA1-206ENST00000517980 TRAV13-2A0A0B4J235 113 aa9.25□□□□□ -0.93
CTNNA1-206ENST00000517980 CRCT1Q9UGL9 99 aa9.25□□□□□ -0.93
CTNNA1-206ENST00000517980 A4D1N5 150 aa9.24□□□□□ -0.93
CTNNA1-206ENST00000517980 RPL37P61927 97 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-206ENST00000517980 NHP2Q9NX24 153 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-206ENST00000517980 TCL1BO95988 128 aa9.2□□□□□ -0.94
CTNNA1-206ENST00000517980 VAMP3Q15836 100 aa9.19□□□□□ -0.94
CTNNA1-206ENST00000517980 LINC00575Q6W349 94 aa9.19□□□□□ -0.94
CTNNA1-206ENST00000517980 F8WEM9 126 aa9.17□□□□□ -0.94
CTNNA1-206ENST00000517980 CFC1BP0CG36 223 aa9.17□□□□□ -0.94
CTNNA1-206ENST00000517980 KRTAP10-6P60371 365 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-206ENST00000517980 M0R2T5 61 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms