RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 TRAPPC2BP0DI82 140 aa-2.82□□□□□ -2.86
RNU6-1238P-201ENST00000517215 IGLC2P0DOY2 106 aa-2.82□□□□□ -2.86
RNU6-1238P-201ENST00000517215 IGLC3P0DOY3 106 aa-2.82□□□□□ -2.86
RNU6-1238P-201ENST00000517215 NCS1P62166 190 aa-2.82□□□□□ -2.86
RNU6-1238P-201ENST00000517215 HIST1H1AQ02539 215 aaPredicted RBP-2.82□□□□□ -2.86
RNU6-1238P-201ENST00000517215 PTRHD1Q6GMV3 140 aaKnown RBP-2.82□□□□□ -2.86
RNU6-1238P-201ENST00000517215 OR9Q1Q8NGQ5 310 aa-2.82□□□□□ -2.86
RNU6-1238P-201ENST00000517215 OR13C6PQ8NH95 151 aa-2.82□□□□□ -2.86
RNU6-1238P-201ENST00000517215 CCDC42Q96M95 316 aa-2.82□□□□□ -2.86
RNU6-1238P-201ENST00000517215 TTTY10Q9BZA0 68 aa-2.82□□□□□ -2.86
RNU6-1238P-201ENST00000517215 CROCC2H7BZ55 1655 aa-2.82□□□□□ -2.86
RNU6-1238P-201ENST00000517215 SHPRHQ149N8 1683 aa-2.82□□□□□ -2.86
RNU6-1238P-201ENST00000517215 KIF21BO75037 1637 aa-2.82□□□□□ -2.86
RNU6-1238P-201ENST00000517215 TNFSF15O95150 251 aa-2.83□□□□□ -2.86
RNU6-1238P-201ENST00000517215 COX6CP09669 75 aa-2.83□□□□□ -2.86
RNU6-1238P-201ENST00000517215 RPS27P42677 84 aaKnown RBP-2.83□□□□□ -2.86
RNU6-1238P-201ENST00000517215 LSM6P62312 80 aaKnown RBP-2.83□□□□□ -2.86
RNU6-1238P-201ENST00000517215 SPA17Q15506 151 aa-2.83□□□□□ -2.86
RNU6-1238P-201ENST00000517215 KRTAP19-2Q3LHN2 52 aa-2.83□□□□□ -2.86
RNU6-1238P-201ENST00000517215 RPS27LQ71UM5 84 aaKnown RBP-2.83□□□□□ -2.86
RNU6-1238P-201ENST00000517215 ITSN2Q9NZM3 1697 aa-2.83□□□□□ -2.86
RNU6-1238P-201ENST00000517215 FAM135AQ9P2D6 1515 aa-2.83□□□□□ -2.86
RNU6-1238P-201ENST00000517215 RPP14O95059 124 aaKnown RBP-2.84□□□□□ -2.86
RNU6-1238P-201ENST00000517215 LEPROTL1O95214 131 aa-2.84□□□□□ -2.86
RNU6-1238P-201ENST00000517215 C12orf73Q69YU5 71 aa-2.84□□□□□ -2.86
RNU6-1238P-201ENST00000517215 VAMP8Q9BV40 100 aa-2.84□□□□□ -2.86
RNU6-1238P-201ENST00000517215 SPANXDQ9BXN6 97 aa-2.84□□□□□ -2.86
RNU6-1238P-201ENST00000517215 MED14O60244 1454 aa-2.84□□□□□ -2.86
RNU6-1238P-201ENST00000517215 OVOS2A0A0G2JMS6 1433 aa-2.85□□□□□ -2.86
RNU6-1238P-201ENST00000517215 SUPT6HQ7KZ85 1726 aaKnown RBP-2.85□□□□□ -2.86
RNU6-1238P-201ENST00000517215 ROCK1Q13464 1354 aa-2.85□□□□□ -2.87
RNU6-1238P-201ENST00000517215 PLCH1Q4KWH8 1693 aa-2.85□□□□□ -2.87
RNU6-1238P-201ENST00000517215 C12orf57Q99622 126 aa-2.85□□□□□ -2.87
RNU6-1238P-201ENST00000517215 LINC00474Q9P2X8 69 aa-2.85□□□□□ -2.87
RNU6-1238P-201ENST00000517215 NCOA2Q15596 1464 aa-2.85□□□□□ -2.87
RNU6-1238P-201ENST00000517215 EEA1Q15075 1411 aa-2.85□□□□□ -2.87
RNU6-1238P-201ENST00000517215 NESP48681 1621 aa-2.86□□□□□ -2.87
RNU6-1238P-201ENST00000517215 NDUFC1O43677 76 aa-2.86□□□□□ -2.87
RNU6-1238P-201ENST00000517215 MRPS10P82664 201 aaKnown RBP-2.86□□□□□ -2.87
RNU6-1238P-201ENST00000517215 LRRC7Q96NW7 1537 aa-2.87□□□□□ -2.87
RNU6-1238P-201ENST00000517215 MON2Q7Z3U7 1717 aa-2.87□□□□□ -2.87
RNU6-1238P-201ENST00000517215 DNAH12Q6ZR08 3092 aa-2.87□□□□□ -2.87
RNU6-1238P-201ENST00000517215 KIF1AQ12756 1690 aa-2.87□□□□□ -2.87
RNU6-1238P-201ENST00000517215 A0A1W2PRE2 83 aa-2.87□□□□□ -2.87
RNU6-1238P-201ENST00000517215 SMIM23A6NLE4 172 aa-2.87□□□□□ -2.87
RNU6-1238P-201ENST00000517215 F6UZH7 168 aa-2.87□□□□□ -2.87
RNU6-1238P-201ENST00000517215 PFDN1O60925 122 aa-2.87□□□□□ -2.87
RNU6-1238P-201ENST00000517215 GNG3P63215 75 aa-2.87□□□□□ -2.87
RNU6-1238P-201ENST00000517215 Q56UQ5 140 aa-2.87□□□□□ -2.87
RNU6-1238P-201ENST00000517215 PRAP1Q96NZ9 151 aa-2.87□□□□□ -2.87
RNU6-1238P-201ENST00000517215 C5P01031 1676 aa-2.88□□□□□ -2.87
RNU6-1238P-201ENST00000517215 CD163L1Q9NR16 1453 aa-2.88□□□□□ -2.87
RNU6-1238P-201ENST00000517215 YKT6O15498 198 aa-2.88□□□□□ -2.87
RNU6-1238P-201ENST00000517215 TCTAP57738 103 aa-2.88□□□□□ -2.87
RNU6-1238P-201ENST00000517215 CCL7P80098 99 aa-2.88□□□□□ -2.87
RNU6-1238P-201ENST00000517215 Q0VG73 95 aa-2.88□□□□□ -2.87
RNU6-1238P-201ENST00000517215 SMIM20Q8N5G0 67 aa-2.88□□□□□ -2.87
RNU6-1238P-201ENST00000517215 LLPHQ9BRT6 129 aaKnown RBP-2.88□□□□□ -2.87
RNU6-1238P-201ENST00000517215 MANBALQ9NQG1 85 aa-2.88□□□□□ -2.87
RNU6-1238P-201ENST00000517215 PRO1854Q9UHT4 67 aa-2.88□□□□□ -2.87
RNU6-1238P-201ENST00000517215 TCHHQ07283 1943 aa-2.88□□□□□ -2.87
RNU6-1238P-201ENST00000517215 ASPMQ8IZT6 3477 aa-2.89□□□□□ -2.87
RNU6-1238P-201ENST00000517215 DBIP07108 87 aaKnown RBP-2.89□□□□□ -2.87
RNU6-1238P-201ENST00000517215 SCTP09683 121 aa-2.89□□□□□ -2.87
RNU6-1238P-201ENST00000517215 CPSF1Q10570 1443 aaKnown RBP-2.89□□□□□ -2.87
RNU6-1238P-201ENST00000517215 NWD1Q149M9 1564 aa-2.89□□□□□ -2.87
RNU6-1238P-201ENST00000517215 RGS21Q2M5E4 152 aa-2.89□□□□□ -2.87
RNU6-1238P-201ENST00000517215 UBR1Q8IWV7 1749 aa-2.89□□□□□ -2.87
RNU6-1238P-201ENST00000517215 TCEAL4Q96EI5 215 aa-2.89□□□□□ -2.87
RNU6-1238P-201ENST00000517215 GAFA1Q96PS6 74 aa-2.89□□□□□ -2.87
RNU6-1238P-201ENST00000517215 SIKE1Q9BRV8 207 aa-2.89□□□□□ -2.87
RNU6-1238P-201ENST00000517215 ARL2BPQ9Y2Y0 163 aa-2.89□□□□□ -2.87
RNU6-1238P-201ENST00000517215 ANKRD36BQ8N2N9 1353 aa-2.89□□□□□ -2.87
RNU6-1238P-201ENST00000517215 ERICH2A1L162 156 aa-2.9□□□□□ -2.87
RNU6-1238P-201ENST00000517215 C20orf202A1L168 122 aa-2.9□□□□□ -2.87
RNU6-1238P-201ENST00000517215 GUCA1AP43080 201 aaPredicted RBP-2.9□□□□□ -2.87
RNU6-1238P-201ENST00000517215 KCNRGQ8N5I3 272 aa-2.9□□□□□ -2.87
RNU6-1238P-201ENST00000517215 ANP32BQ92688 251 aaKnown RBP-2.9□□□□□ -2.87
RNU6-1238P-201ENST00000517215 THOC2Q8NI27 1593 aaKnown RBP-2.91□□□□□ -2.87
RNU6-1238P-201ENST00000517215 CCDC58Q4VC31 144 aa-2.91□□□□□ -2.88
RNU6-1238P-201ENST00000517215 PPP3R2Q96LZ3 170 aa-2.91□□□□□ -2.88
RNU6-1238P-201ENST00000517215 BOLA2Q9H3K6 86 aa-2.91□□□□□ -2.88
RNU6-1238P-201ENST00000517215 ZC3H13Q5T200 1668 aaKnown RBP-2.92□□□□□ -2.88
RNU6-1238P-201ENST00000517215 KIAA0586Q9BVV6 1533 aa-2.92□□□□□ -2.88
RNU6-1238P-201ENST00000517215 SPHKAPQ2M3C7 1700 aa-2.92□□□□□ -2.88
RNU6-1238P-201ENST00000517215 MIF4GDA9UHW6 222 aaKnown RBP-2.92□□□□□ -2.88
RNU6-1238P-201ENST00000517215 LSM10Q969L4 123 aaKnown RBP-2.92□□□□□ -2.88
RNU6-1238P-201ENST00000517215 HIGD1AQ9Y241 93 aa-2.92□□□□□ -2.88
RNU6-1238P-201ENST00000517215 SCAPERQ9BY12 1400 aa-2.93□□□□□ -2.88
RNU6-1238P-201ENST00000517215 LRRIQ1Q96JM4 1722 aa-2.93□□□□□ -2.88
RNU6-1238P-201ENST00000517215 TMEM262E9PQX1 116 aa-2.93□□□□□ -2.88
RNU6-1238P-201ENST00000517215 S100A9P06702 114 aaKnown RBP-2.93□□□□□ -2.88
RNU6-1238P-201ENST00000517215 IGLC6P0CF74 106 aa-2.93□□□□□ -2.88
RNU6-1238P-201ENST00000517215 GNG11P61952 73 aa-2.93□□□□□ -2.88
RNU6-1238P-201ENST00000517215 ALKAL2Q6UX46 152 aa-2.93□□□□□ -2.88
RNU6-1238P-201ENST00000517215 TMEM35BQ8NCS4 154 aa-2.93□□□□□ -2.88
RNU6-1238P-201ENST00000517215 C1orf54Q8WWF1 131 aa-2.93□□□□□ -2.88
RNU6-1238P-201ENST00000517215 RERGLQ9H628 205 aa-2.93□□□□□ -2.88
RNU6-1238P-201ENST00000517215 ZFYVE16Q7Z3T8 1539 aa-2.93□□□□□ -2.88
RNU6-1238P-201ENST00000517215 CDK5RAP2Q96SN8 1893 aa-2.94□□□□□ -2.88
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms