RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 HIGD2AQ9BW72 106 aa4.61□□□□□ -1.67
SCARNA20.3-201ENST00000516913 E9PLD3 99 aa4.6□□□□□ -1.67
SCARNA20.3-201ENST00000516913 PLNP26678 52 aa4.6□□□□□ -1.67
SCARNA20.3-201ENST00000516913 NMUP48645 174 aa4.6□□□□□ -1.67
SCARNA20.3-201ENST00000516913 CTAG1AP78358 180 aa4.6□□□□□ -1.67
SCARNA20.3-201ENST00000516913 PAPPA-AS1Q5QFB9 102 aa4.6□□□□□ -1.67
SCARNA20.3-201ENST00000516913 Q8NBF4 154 aa4.6□□□□□ -1.67
SCARNA20.3-201ENST00000516913 SMCR5Q8TEV8 140 aa4.6□□□□□ -1.67
SCARNA20.3-201ENST00000516913 UQCR10Q9UDW1 63 aa4.6□□□□□ -1.67
SCARNA20.3-201ENST00000516913 A0A0U1RRA0 63 aa4.59□□□□□ -1.67
SCARNA20.3-201ENST00000516913 HSBP1L1C9JCN9 74 aa4.59□□□□□ -1.67
SCARNA20.3-201ENST00000516913 SPRR1AP35321 89 aa4.59□□□□□ -1.67
SCARNA20.3-201ENST00000516913 TMEM170BQ5T4T1 132 aa4.59□□□□□ -1.67
SCARNA20.3-201ENST00000516913 SLC25A34Q6PIV7 304 aa4.59□□□□□ -1.67
SCARNA20.3-201ENST00000516913 SNHG12Q9BXW3 62 aa4.59□□□□□ -1.67
SCARNA20.3-201ENST00000516913 SSPOA2VEC9 5147 aa4.58□□□□□ -1.68
SCARNA20.3-201ENST00000516913 DLEU1O43261 78 aa4.58□□□□□ -1.68
SCARNA20.3-201ENST00000516913 USH2AO75445 5202 aa4.58□□□□□ -1.68
SCARNA20.3-201ENST00000516913 LEPROTO15243 131 aa4.57□□□□□ -1.68
SCARNA20.3-201ENST00000516913 MT1HP80294 61 aa4.57□□□□□ -1.68
SCARNA20.3-201ENST00000516913 MYMXA0A1B0GTQ4 84 aa4.56□□□□□ -1.68
SCARNA20.3-201ENST00000516913 J3QQQ9 107 aa4.56□□□□□ -1.68
SCARNA20.3-201ENST00000516913 EIF4EBP3O60516 100 aaPredicted RBP4.56□□□□□ -1.68
SCARNA20.3-201ENST00000516913 SMIM13P0DJ93 91 aa4.56□□□□□ -1.68
SCARNA20.3-201ENST00000516913 HINT1P49773 126 aaPredicted RBP4.56□□□□□ -1.68
SCARNA20.3-201ENST00000516913 LINC00483Q53H64 154 aa4.56□□□□□ -1.68
SCARNA20.3-201ENST00000516913 Q8N377 158 aa4.56□□□□□ -1.68
SCARNA20.3-201ENST00000516913 Q9BRP9 147 aa4.56□□□□□ -1.68
SCARNA20.3-201ENST00000516913 TRBV10-3A0A0K0K1G6 114 aa4.55□□□□□ -1.68
SCARNA20.3-201ENST00000516913 H3BRM9 83 aa4.55□□□□□ -1.68
SCARNA20.3-201ENST00000516913 COX17Q14061 63 aa4.55□□□□□ -1.68
SCARNA20.3-201ENST00000516913 XP32Q5T750 250 aa4.55□□□□□ -1.68
SCARNA20.3-201ENST00000516913 FP248Q71RG6 208 aaPredicted RBP4.55□□□□□ -1.68
SCARNA20.3-201ENST00000516913 KCNQ1DNQ9H478 68 aa4.55□□□□□ -1.68
SCARNA20.3-201ENST00000516913 B5MCH6 92 aa4.54□□□□□ -1.68
SCARNA20.3-201ENST00000516913 NCR3O14931 201 aa4.54□□□□□ -1.68
SCARNA20.3-201ENST00000516913 RPL24P83731 157 aaKnown RBP4.54□□□□□ -1.68
SCARNA20.3-201ENST00000516913 BVES-AS1Q5T3Y7 98 aa4.54□□□□□ -1.68
SCARNA20.3-201ENST00000516913 SPAG11AQ6PDA7 123 aa4.54□□□□□ -1.68
SCARNA20.3-201ENST00000516913 HIGD1BQ9P298 99 aa4.54□□□□□ -1.68
SCARNA20.3-201ENST00000516913 ZNF815PA8K554 130 aa4.53□□□□□ -1.68
SCARNA20.3-201ENST00000516913 M0R143 59 aa4.53□□□□□ -1.68
SCARNA20.3-201ENST00000516913 LORP23490 312 aaPredicted RBP4.53□□□□□ -1.68
SCARNA20.3-201ENST00000516913 LINC00158P58513 81 aa4.53□□□□□ -1.68
SCARNA20.3-201ENST00000516913 HERVK_113P61574 105 aa4.53□□□□□ -1.68
SCARNA20.3-201ENST00000516913 GAGE2AQ6NT46 116 aa4.53□□□□□ -1.68
SCARNA20.3-201ENST00000516913 LINC00337Q8N6G1 96 aa4.53□□□□□ -1.68
SCARNA20.3-201ENST00000516913 LITAFQ99732 161 aa4.53□□□□□ -1.68
SCARNA20.3-201ENST00000516913 A0A0J9YXY3 114 aa4.52□□□□□ -1.69
SCARNA20.3-201ENST00000516913 LGALS3P17931 250 aaKnown RBP4.52□□□□□ -1.69
SCARNA20.3-201ENST00000516913 LINC01547P58512 204 aaPredicted RBP4.52□□□□□ -1.69
SCARNA20.3-201ENST00000516913 BATFQ16520 125 aa4.52□□□□□ -1.69
SCARNA20.3-201ENST00000516913 ADAMTSL4-AS1Q5T5F5 129 aa4.52□□□□□ -1.69
SCARNA20.3-201ENST00000516913 Q6ZVH6 145 aa4.52□□□□□ -1.69
SCARNA20.3-201ENST00000516913 MIR7-3HGQ8N6C7 128 aa4.52□□□□□ -1.69
SCARNA20.3-201ENST00000516913 PRYO14603 147 aa4.51□□□□□ -1.69
SCARNA20.3-201ENST00000516913 SPINK1P00995 79 aa4.51□□□□□ -1.69
SCARNA20.3-201ENST00000516913 FXYD2P54710 66 aa4.51□□□□□ -1.69
SCARNA20.3-201ENST00000516913 HSD52Q0P140 79 aa4.51□□□□□ -1.69
SCARNA20.3-201ENST00000516913 MOBPQ13875 183 aa4.51□□□□□ -1.69
SCARNA20.3-201ENST00000516913 ST20-AS1Q8NBB2 130 aa4.51□□□□□ -1.69
SCARNA20.3-201ENST00000516913 NDUFA12Q9UI09 145 aa4.51□□□□□ -1.69
SCARNA20.3-201ENST00000516913 IGLV9-49A0A0B4J1Y8 123 aa4.5□□□□□ -1.69
SCARNA20.3-201ENST00000516913 SOSTDC1Q6X4U4 206 aa4.5□□□□□ -1.69
SCARNA20.3-201ENST00000516913 LOC107984156A0A0G2JMH3 177 aa4.49□□□□□ -1.69
SCARNA20.3-201ENST00000516913 A0A1B0GV90 55 aa4.49□□□□□ -1.69
SCARNA20.3-201ENST00000516913 TAX1BP3O14907 124 aa4.49□□□□□ -1.69
SCARNA20.3-201ENST00000516913 KRTAP10-6P60371 365 aaPredicted RBP4.49□□□□□ -1.69
SCARNA20.3-201ENST00000516913 ARL17AQ8IVW1 177 aa4.49□□□□□ -1.69
SCARNA20.3-201ENST00000516913 CEND1Q8N111 149 aa4.49□□□□□ -1.69
SCARNA20.3-201ENST00000516913 SPANXB1Q9NS25 103 aaPredicted RBP4.49□□□□□ -1.69
SCARNA20.3-201ENST00000516913 K7ERJ3 54 aa4.48□□□□□ -1.69
SCARNA20.3-201ENST00000516913 SEC61BP60468 96 aaKnown RBP4.48□□□□□ -1.69
SCARNA20.3-201ENST00000516913 TAL2Q16559 108 aa4.48□□□□□ -1.69
SCARNA20.3-201ENST00000516913 PCOTHQ58A44 107 aa4.48□□□□□ -1.69
SCARNA20.3-201ENST00000516913 SCGB1D4Q6XE38 83 aa4.48□□□□□ -1.69
SCARNA20.3-201ENST00000516913 MUSTN1Q8IVN3 82 aa4.48□□□□□ -1.69
SCARNA20.3-201ENST00000516913 HIST1H4GQ99525 98 aa4.48□□□□□ -1.69
SCARNA20.3-201ENST00000516913 NPC2P61916 151 aa4.47□□□□□ -1.69
SCARNA20.3-201ENST00000516913 C4orf48Q5BLP8 95 aa4.47□□□□□ -1.69
SCARNA20.3-201ENST00000516913 SPANXDQ9BXN6 97 aa4.47□□□□□ -1.69
SCARNA20.3-201ENST00000516913 SPANXCQ9NY87 97 aa4.47□□□□□ -1.69
SCARNA20.3-201ENST00000516913 ETDCA0A1B0GVM5 59 aa4.46□□□□□ -1.7
SCARNA20.3-201ENST00000516913 A0A1B0GWB2 263 aa4.46□□□□□ -1.7
SCARNA20.3-201ENST00000516913 TIMM17BO60830 172 aa4.46□□□□□ -1.7
SCARNA20.3-201ENST00000516913 IGLV6-57P01721 117 aa4.46□□□□□ -1.7
SCARNA20.3-201ENST00000516913 RPS29P62273 56 aaKnown RBP4.46□□□□□ -1.7
SCARNA20.3-201ENST00000516913 Q6ZRX8 168 aa4.46□□□□□ -1.7
SCARNA20.3-201ENST00000516913 SSBP3-AS1Q7Z2R9 100 aa4.46□□□□□ -1.7
SCARNA20.3-201ENST00000516913 NAA38Q9BRA0 125 aaKnown RBP4.46□□□□□ -1.7
SCARNA20.3-201ENST00000516913 ZNF706Q9Y5V0 76 aaPredicted RBP4.46□□□□□ -1.7
SCARNA20.3-201ENST00000516913 A0A0G2JQZ4 141 aa4.45□□□□□ -1.7
SCARNA20.3-201ENST00000516913 A4D1N5 150 aa4.45□□□□□ -1.7
SCARNA20.3-201ENST00000516913 CFC1BP0CG36 223 aa4.45□□□□□ -1.7
SCARNA20.3-201ENST00000516913 CFC1P0CG37 223 aa4.45□□□□□ -1.7
SCARNA20.3-201ENST00000516913 HERV-K104P63124 156 aa4.45□□□□□ -1.7
SCARNA20.3-201ENST00000516913 COL5A1-AS1Q5SY13 56 aa4.45□□□□□ -1.7
SCARNA20.3-201ENST00000516913 LINC00308Q8TCZ7 52 aa4.45□□□□□ -1.7
SCARNA20.3-201ENST00000516913 NHP2Q9NX24 153 aaKnown RBP4.45□□□□□ -1.7
SCARNA20.3-201ENST00000516913 C9orf92A6NGG3 77 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms