RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 TENM2Q9NT68 2774 aa12.91□□□□□ -0.34
TRIO-223ENST00000515710 LINC00643Q86TS7 51 aa12.9□□□□□ -0.34
TRIO-223ENST00000515710 DIRC1Q969H9 104 aa12.9□□□□□ -0.34
TRIO-223ENST00000515710 DNAL4O96015 105 aa12.9□□□□□ -0.35
TRIO-223ENST00000515710 A0A096LNI7 61 aa12.89□□□□□ -0.35
TRIO-223ENST00000515710 C7orf33Q8WU49 177 aa12.89□□□□□ -0.35
TRIO-223ENST00000515710 TRBV7-6A0A0J9YX20 115 aa12.88□□□□□ -0.35
TRIO-223ENST00000515710 FAM168BA1KXE4 195 aa12.88□□□□□ -0.35
TRIO-223ENST00000515710 ZNF73O43830 326 aaPredicted RBP12.88□□□□□ -0.35
TRIO-223ENST00000515710 UQCRQO14949 82 aa12.88□□□□□ -0.35
TRIO-223ENST00000515710 C3orf22Q8N5N4 141 aa12.88□□□□□ -0.35
TRIO-223ENST00000515710 C22orf24Q9Y442 160 aa12.88□□□□□ -0.35
TRIO-223ENST00000515710 KRTAP7-1Q8IUC3 87 aa12.86□□□□□ -0.35
TRIO-223ENST00000515710 BAALC-AS2P0C853 105 aa12.86□□□□□ -0.35
TRIO-223ENST00000515710 LINC00575Q6W349 94 aa12.86□□□□□ -0.35
TRIO-223ENST00000515710 KCNQ1DNQ9H478 68 aa12.86□□□□□ -0.35
TRIO-223ENST00000515710 FAM19A5Q7Z5A7 132 aaPredicted RBP12.85□□□□□ -0.35
TRIO-223ENST00000515710 IGKV2-24A0A0C4DH68 120 aa12.84□□□□□ -0.35
TRIO-223ENST00000515710 FAM236AA0A1B0GUQ0 79 aa12.84□□□□□ -0.35
TRIO-223ENST00000515710 FAM236BA0A1B0GV22 79 aa12.84□□□□□ -0.35
TRIO-223ENST00000515710 COX7BP24311 80 aa12.84□□□□□ -0.35
TRIO-223ENST00000515710 MRPL55Q7Z7F7 128 aaKnown RBP12.84□□□□□ -0.35
TRIO-223ENST00000515710 LINC00167Q96N53 147 aa12.84□□□□□ -0.35
TRIO-223ENST00000515710 IGLV1-50A0A075B6I6 118 aa12.83□□□□□ -0.36
TRIO-223ENST00000515710 LINC00474Q9P2X8 69 aa12.82□□□□□ -0.36
TRIO-223ENST00000515710 ELOF1P60002 83 aaKnown RBP12.82□□□□□ -0.36
TRIO-223ENST00000515710 hADV29S1A0JD25 119 aa12.81□□□□□ -0.36
TRIO-223ENST00000515710 PRYO14603 147 aa12.8□□□□□ -0.36
TRIO-223ENST00000515710 RPS28P62857 69 aaKnown RBP12.8□□□□□ -0.36
TRIO-223ENST00000515710 C9orf153Q5TBE3 101 aa12.8□□□□□ -0.36
TRIO-223ENST00000515710 A0A1W2PNN7 141 aa12.8□□□□□ -0.36
TRIO-223ENST00000515710 ORMDL1Q9P0S3 153 aa12.8□□□□□ -0.36
TRIO-223ENST00000515710 HIST1H4AP62805 103 aaKnown RBP12.79□□□□□ -0.36
TRIO-223ENST00000515710 RPL37AP8A6NKH3 93 aa12.78□□□□□ -0.36
TRIO-223ENST00000515710 CRYGAP11844 174 aa12.78□□□□□ -0.36
TRIO-223ENST00000515710 ALMS1Q8TCU4 4167 aa12.77□□□□□ -0.36
TRIO-223ENST00000515710 DNAH6Q9C0G6 4158 aa12.77□□□□□ -0.37
TRIO-223ENST00000515710 RTL8CO15255 209 aa12.76□□□□□ -0.37
TRIO-223ENST00000515710 CHTF8P0CG12 524 aa12.76□□□□□ -0.37
TRIO-223ENST00000515710 INAFM2P0DMQ5 153 aa12.76□□□□□ -0.37
TRIO-223ENST00000515710 COX7CP15954 63 aa12.76□□□□□ -0.37
TRIO-223ENST00000515710 SMCR5Q8TEV8 140 aa12.76□□□□□ -0.37
TRIO-223ENST00000515710 J3KT08 172 aa12.76□□□□□ -0.37
TRIO-223ENST00000515710 SPRR1AP35321 89 aa12.76□□□□□ -0.37
TRIO-223ENST00000515710 LINC00528Q8N1L1 170 aa12.76□□□□□ -0.37
TRIO-223ENST00000515710 TGP01266 2768 aa12.75□□□□□ -0.37
TRIO-223ENST00000515710 C5orf47Q569G3 176 aa12.74□□□□□ -0.37
TRIO-223ENST00000515710 KMT2AQ03164 3969 aa12.74□□□□□ -0.37
TRIO-223ENST00000515710 TMEM256-PLSCR3K7ERE1 68 aa12.73□□□□□ -0.37
TRIO-223ENST00000515710 ATOX1O00244 68 aa12.73□□□□□ -0.37
TRIO-223ENST00000515710 H3BQ85 93 aa12.72□□□□□ -0.37
TRIO-223ENST00000515710 TNP2Q05952 138 aa12.72□□□□□ -0.37
TRIO-223ENST00000515710 KRTAP4-16G5E9R7 235 aaPredicted RBP12.72□□□□□ -0.37
TRIO-223ENST00000515710 IGLV5-52A0A0A0MRZ9 124 aa12.71□□□□□ -0.37
TRIO-223ENST00000515710 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.71□□□□□ -0.37
TRIO-223ENST00000515710 DNAH2Q9P225 4427 aa12.71□□□□□ -0.38
TRIO-223ENST00000515710 ETDCA0A1B0GVM5 59 aa12.7□□□□□ -0.38
TRIO-223ENST00000515710 GHRHP01286 108 aa12.7□□□□□ -0.38
TRIO-223ENST00000515710 REG3GQ6UW15 175 aa12.7□□□□□ -0.38
TRIO-223ENST00000515710 SPACA4Q8TDM5 124 aa12.7□□□□□ -0.38
TRIO-223ENST00000515710 Q6ZQY7 126 aa12.69□□□□□ -0.38
TRIO-223ENST00000515710 DPH3Q96FX2 82 aa12.69□□□□□ -0.38
TRIO-223ENST00000515710 PANO1I0J062 215 aa12.68□□□□□ -0.38
TRIO-223ENST00000515710 Q6ZRX8 168 aa12.68□□□□□ -0.38
TRIO-223ENST00000515710 EPM2AB3EWF7 344 aa12.67□□□□□ -0.38
TRIO-223ENST00000515710 PHF5AQ7RTV0 110 aaKnown RBP12.67□□□□□ -0.38
TRIO-223ENST00000515710 DHRS4-AS1Q9P1J3 65 aa12.67□□□□□ -0.38
TRIO-223ENST00000515710 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.66□□□□□ -0.38
TRIO-223ENST00000515710 FUSP35637 526 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRIO-223ENST00000515710 GAGE2AQ6NT46 116 aa12.65□□□□□ -0.38
TRIO-223ENST00000515710 DNAH17Q9UFH2 4485 aa12.65□□□□□ -0.39
TRIO-223ENST00000515710 UBE2BP63146 152 aa12.64□□□□□ -0.39
TRIO-223ENST00000515710 OBSCN-AS1Q96MR7 158 aa12.64□□□□□ -0.39
TRIO-223ENST00000515710 TMEM258P61165 79 aa12.63□□□□□ -0.39
TRIO-223ENST00000515710 Q6JHZ5 121 aa12.63□□□□□ -0.39
TRIO-223ENST00000515710 JMJD7-PLA2G4BH0Y9G9 81 aa12.62□□□□□ -0.39
TRIO-223ENST00000515710 LCE6AA0A183 80 aa12.61□□□□□ -0.39
TRIO-223ENST00000515710 Q9BRP9 147 aa12.6□□□□□ -0.39
TRIO-223ENST00000515710 FAM19A1Q7Z5A9 133 aa12.58□□□□□ -0.4
TRIO-223ENST00000515710 SERP2Q8N6R1 65 aa12.58□□□□□ -0.4
TRIO-223ENST00000515710 PLAC8Q9NZF1 115 aa12.58□□□□□ -0.4
TRIO-223ENST00000515710 KRTAP10-2P60368 255 aa12.56□□□□□ -0.4
TRIO-223ENST00000515710 KRTAP11-1Q8IUC1 163 aa12.56□□□□□ -0.4
TRIO-223ENST00000515710 LAMTOR3Q9UHA4 124 aa12.56□□□□□ -0.4
TRIO-223ENST00000515710 C14orf132Q9NPU4 83 aa12.54□□□□□ -0.4
TRIO-223ENST00000515710 H0Y9J4 135 aa12.54□□□□□ -0.4
TRIO-223ENST00000515710 RBM3P98179 157 aaKnown RBP12.52□□□□□ -0.41
TRIO-223ENST00000515710 BCE1O60756 84 aa12.5□□□□□ -0.41
TRIO-223ENST00000515710 PRLHP81277 87 aa12.5□□□□□ -0.41
TRIO-223ENST00000515710 ERC2-IT1O76042 136 aa12.5□□□□□ -0.41
TRIO-223ENST00000515710 LINC01547P58512 204 aaPredicted RBP12.5□□□□□ -0.41
TRIO-223ENST00000515710 Q8N377 158 aa12.5□□□□□ -0.41
TRIO-223ENST00000515710 DEFB105AQ8NG35 78 aa12.5□□□□□ -0.41
TRIO-223ENST00000515710 IGLV5-48A0A075B6I7 105 aa12.49□□□□□ -0.41
TRIO-223ENST00000515710 ATP5EP2Q5VTU8 51 aa12.49□□□□□ -0.41
TRIO-223ENST00000515710 LINC00336Q6ZUF6 198 aa12.49□□□□□ -0.41
TRIO-223ENST00000515710 HECTD4Q9Y4D8 3996 aa12.48□□□□□ -0.41
TRIO-223ENST00000515710 HYDINQ4G0P3 5121 aa12.48□□□□□ -0.41
TRIO-223ENST00000515710 FRAS1Q86XX4 4008 aa12.47□□□□□ -0.41
TRIO-223ENST00000515710 UBE2AP49459 152 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms