RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 PKD1P98161 4303 aa5.82□□□□□ -1.48
CPNE4-213ENST00000515418 TRAV23DV6A0A075B6W5 121 aa5.82□□□□□ -1.48
CPNE4-213ENST00000515418 F8W1H4 67 aa5.82□□□□□ -1.48
CPNE4-213ENST00000515418 LINC00167Q96N53 147 aa5.82□□□□□ -1.48
CPNE4-213ENST00000515418 PLA2G2DQ9UNK4 145 aa5.82□□□□□ -1.48
CPNE4-213ENST00000515418 KRTAP4-8A0A0G2JLE6 195 aa5.82□□□□□ -1.48
CPNE4-213ENST00000515418 DPH3Q96FX2 82 aa5.82□□□□□ -1.48
CPNE4-213ENST00000515418 H0YGX0 51 aa5.81□□□□□ -1.48
CPNE4-213ENST00000515418 LCE2BO14633 110 aa5.81□□□□□ -1.48
CPNE4-213ENST00000515418 SLC25A20O43772 301 aa5.8□□□□□ -1.48
CPNE4-213ENST00000515418 ZNF73O43830 326 aaPredicted RBP5.8□□□□□ -1.48
CPNE4-213ENST00000515418 ETDBQ3ZM63 59 aa5.8□□□□□ -1.48
CPNE4-213ENST00000515418 IGLV5-37A0A075B6J1 123 aa5.8□□□□□ -1.48
CPNE4-213ENST00000515418 MRPL55Q7Z7F7 128 aaKnown RBP5.8□□□□□ -1.48
CPNE4-213ENST00000515418 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.8□□□□□ -1.48
CPNE4-213ENST00000515418 RYR2Q92736 4967 aa5.79□□□□□ -1.48
CPNE4-213ENST00000515418 IGLV1-50A0A075B6I6 118 aa5.79□□□□□ -1.48
CPNE4-213ENST00000515418 M0QXV9 152 aa5.79□□□□□ -1.48
CPNE4-213ENST00000515418 KRTAP10-2P60368 255 aa5.79□□□□□ -1.48
CPNE4-213ENST00000515418 DNAH8Q96JB1 4490 aa5.79□□□□□ -1.48
CPNE4-213ENST00000515418 SRRM2Q9UQ35 2752 aaKnown RBP5.79□□□□□ -1.48
CPNE4-213ENST00000515418 IGLV5-52A0A0A0MRZ9 124 aa5.78□□□□□ -1.48
CPNE4-213ENST00000515418 TRACP01848 142 aa5.78□□□□□ -1.48
CPNE4-213ENST00000515418 DIRC1Q969H9 104 aa5.78□□□□□ -1.48
CPNE4-213ENST00000515418 KCNQ1DNQ9H478 68 aa5.78□□□□□ -1.48
CPNE4-213ENST00000515418 LINC00575Q6W349 94 aa5.78□□□□□ -1.48
CPNE4-213ENST00000515418 PHF5AQ7RTV0 110 aaKnown RBP5.78□□□□□ -1.48
CPNE4-213ENST00000515418 ANKRD29Q8N6D5 301 aa5.78□□□□□ -1.48
CPNE4-213ENST00000515418 LCE6AA0A183 80 aa5.77□□□□□ -1.49
CPNE4-213ENST00000515418 BAALC-AS2P0C853 105 aa5.77□□□□□ -1.49
CPNE4-213ENST00000515418 KRTAP11-1Q8IUC1 163 aa5.77□□□□□ -1.49
CPNE4-213ENST00000515418 COX7BP24311 80 aa5.76□□□□□ -1.49
CPNE4-213ENST00000515418 DNAL4O96015 105 aa5.76□□□□□ -1.49
CPNE4-213ENST00000515418 ELOF1P60002 83 aaKnown RBP5.76□□□□□ -1.49
CPNE4-213ENST00000515418 SPACA4Q8TDM5 124 aa5.76□□□□□ -1.49
CPNE4-213ENST00000515418 LINC00474Q9P2X8 69 aa5.75□□□□□ -1.49
CPNE4-213ENST00000515418 PKHD1P08F94 4074 aa5.75□□□□□ -1.49
CPNE4-213ENST00000515418 hADV29S1A0JD25 119 aa5.75□□□□□ -1.49
CPNE4-213ENST00000515418 TEX49A0A1B0GTD5 131 aa5.74□□□□□ -1.49
CPNE4-213ENST00000515418 KRTAP4-16G5E9R7 235 aaPredicted RBP5.74□□□□□ -1.49
CPNE4-213ENST00000515418 LINC00528Q8N1L1 170 aa5.74□□□□□ -1.49
CPNE4-213ENST00000515418 TRBV7-6A0A0J9YX20 115 aa5.73□□□□□ -1.49
CPNE4-213ENST00000515418 H3BT86 120 aa5.73□□□□□ -1.49
CPNE4-213ENST00000515418 UBE2BP63146 152 aa5.73□□□□□ -1.49
CPNE4-213ENST00000515418 OCIAD2Q56VL3 154 aa5.73□□□□□ -1.49
CPNE4-213ENST00000515418 REG3GQ6UW15 175 aa5.73□□□□□ -1.49
CPNE4-213ENST00000515418 TEN1Q86WV5 123 aa5.73□□□□□ -1.49
CPNE4-213ENST00000515418 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
CPNE4-213ENST00000515418 PKIGQ9Y2B9 76 aa5.73□□□□□ -1.49
CPNE4-213ENST00000515418 B5MCH6 92 aa5.73□□□□□ -1.49
CPNE4-213ENST00000515418 PRYO14603 147 aa5.73□□□□□ -1.49
CPNE4-213ENST00000515418 SPRR1AP35321 89 aa5.73□□□□□ -1.49
CPNE4-213ENST00000515418 FAM30AQ9NZY2 134 aa5.73□□□□□ -1.49
CPNE4-213ENST00000515418 CBY1Q9Y3M2 126 aa5.73□□□□□ -1.49
CPNE4-213ENST00000515418 A0A1B0GV72 72 aa5.72□□□□□ -1.49
CPNE4-213ENST00000515418 ETDCA0A1B0GVM5 59 aa5.72□□□□□ -1.49
CPNE4-213ENST00000515418 A0A1B0GX51 115 aa5.72□□□□□ -1.49
CPNE4-213ENST00000515418 Q6ZQY7 126 aa5.72□□□□□ -1.49
CPNE4-213ENST00000515418 LINC01600Q96MT4 127 aa5.72□□□□□ -1.49
CPNE4-213ENST00000515418 Q9BRP9 147 aa5.72□□□□□ -1.49
CPNE4-213ENST00000515418 ORMDL1Q9P0S3 153 aa5.72□□□□□ -1.49
CPNE4-213ENST00000515418 RYR3Q15413 4870 aa5.72□□□□□ -1.49
CPNE4-213ENST00000515418 SNCGO76070 127 aa5.71□□□□□ -1.49
CPNE4-213ENST00000515418 Q6ZRX8 168 aa5.71□□□□□ -1.49
CPNE4-213ENST00000515418 KRTAP10-1P60331 282 aa5.71□□□□□ -1.5
CPNE4-213ENST00000515418 HAMPP81172 84 aa5.71□□□□□ -1.5
CPNE4-213ENST00000515418 ERC2-IT1O76042 136 aa5.7□□□□□ -1.5
CPNE4-213ENST00000515418 FAM19A1Q7Z5A9 133 aa5.7□□□□□ -1.5
CPNE4-213ENST00000515418 LRP1BQ9NZR2 4599 aa5.7□□□□□ -1.5
CPNE4-213ENST00000515418 EPM2AB3EWF7 344 aa5.69□□□□□ -1.5
CPNE4-213ENST00000515418 PRLHP81277 87 aa5.69□□□□□ -1.5
CPNE4-213ENST00000515418 PPDPFLQ8WWR9 84 aa5.69□□□□□ -1.5
CPNE4-213ENST00000515418 PLAC8Q9NZF1 115 aa5.69□□□□□ -1.5
CPNE4-213ENST00000515418 DEFB105AQ8NG35 78 aa5.69□□□□□ -1.5
CPNE4-213ENST00000515418 TMEM256-PLSCR3K7ERE1 68 aa5.68□□□□□ -1.5
CPNE4-213ENST00000515418 ST20-AS1Q8NBB2 130 aa5.68□□□□□ -1.5
CPNE4-213ENST00000515418 DYNC1H1Q14204 4646 aaKnown RBP5.68□□□□□ -1.5
CPNE4-213ENST00000515418 INAFM2P0DMQ5 153 aa5.67□□□□□ -1.5
CPNE4-213ENST00000515418 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.67□□□□□ -1.5
CPNE4-213ENST00000515418 SMCR5Q8TEV8 140 aa5.67□□□□□ -1.5
CPNE4-213ENST00000515418 K7ERU9 68 aa5.67□□□□□ -1.5
CPNE4-213ENST00000515418 CIRBP-AS1Q8TBR5 109 aa5.67□□□□□ -1.5
CPNE4-213ENST00000515418 DHRS4-AS1Q9P1J3 65 aa5.67□□□□□ -1.5
CPNE4-213ENST00000515418 HIGD2AQ9BW72 106 aa5.66□□□□□ -1.5
CPNE4-213ENST00000515418 LINC00336Q6ZUF6 198 aa5.65□□□□□ -1.51
CPNE4-213ENST00000515418 Q8N377 158 aa5.65□□□□□ -1.51
CPNE4-213ENST00000515418 C14orf132Q9NPU4 83 aa5.65□□□□□ -1.51
CPNE4-213ENST00000515418 LAMTOR3Q9UHA4 124 aa5.65□□□□□ -1.51
CPNE4-213ENST00000515418 PSORS1C2Q9UIG4 136 aa5.65□□□□□ -1.51
CPNE4-213ENST00000515418 BCE1O60756 84 aa5.64□□□□□ -1.51
CPNE4-213ENST00000515418 UBE2AP49459 152 aa5.64□□□□□ -1.51
CPNE4-213ENST00000515418 LINC01547P58512 204 aaPredicted RBP5.64□□□□□ -1.51
CPNE4-213ENST00000515418 Q6ZSA8 131 aa5.64□□□□□ -1.51
CPNE4-213ENST00000515418 SCXQ7RTU7 201 aa5.64□□□□□ -1.51
CPNE4-213ENST00000515418 C3orf22Q8N5N4 141 aa5.64□□□□□ -1.51
CPNE4-213ENST00000515418 OBSCN-AS1Q96MR7 158 aa5.64□□□□□ -1.51
CPNE4-213ENST00000515418 A0A1B0GVY2 172 aa5.63□□□□□ -1.51
CPNE4-213ENST00000515418 J3QR89 54 aa5.62□□□□□ -1.51
CPNE4-213ENST00000515418 C1orf137Q5JT78 98 aa5.62□□□□□ -1.51
CPNE4-213ENST00000515418 NDUFV3P56181 108 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms