RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 SACSQ9NZJ4 4579 aa6.36□□□□□ -1.39
TPM3-221ENST00000513769 CSMD3Q7Z407 3707 aa6.36□□□□□ -1.39
TPM3-221ENST00000513769 H3BQ85 93 aa6.35□□□□□ -1.39
TPM3-221ENST00000513769 LST1O00453 97 aa6.35□□□□□ -1.39
TPM3-221ENST00000513769 RPL18AQ02543 176 aaKnown RBP6.35□□□□□ -1.39
TPM3-221ENST00000513769 WFDC2Q14508 124 aa6.35□□□□□ -1.39
TPM3-221ENST00000513769 SDIM1Q6ZPB5 146 aa6.35□□□□□ -1.39
TPM3-221ENST00000513769 DNAH1Q9P2D7 4330 aa6.34□□□□□ -1.39
TPM3-221ENST00000513769 LYSTQ99698 3801 aa6.34□□□□□ -1.39
TPM3-221ENST00000513769 GAGE2BQ13066 116 aa6.34□□□□□ -1.39
TPM3-221ENST00000513769 NKAPP1Q8N9T2 125 aa6.34□□□□□ -1.39
TPM3-221ENST00000513769 KCNQ1DNQ9H478 68 aa6.34□□□□□ -1.39
TPM3-221ENST00000513769 INAFM2P0DMQ5 153 aa6.33□□□□□ -1.4
TPM3-221ENST00000513769 LINC01620Q4KN68 170 aa6.33□□□□□ -1.4
TPM3-221ENST00000513769 TRBV10-3A0A0K0K1G6 114 aa6.32□□□□□ -1.4
TPM3-221ENST00000513769 NCR3O14931 201 aa6.32□□□□□ -1.4
TPM3-221ENST00000513769 Q8NDZ9 215 aa6.32□□□□□ -1.4
TPM3-221ENST00000513769 C22orf24Q9Y442 160 aa6.32□□□□□ -1.4
TPM3-221ENST00000513769 IGLV1-50A0A075B6I6 118 aa6.31□□□□□ -1.4
TPM3-221ENST00000513769 TRAV23DV6A0A075B6W5 121 aa6.31□□□□□ -1.4
TPM3-221ENST00000513769 EPM2AB3EWF7 344 aa6.31□□□□□ -1.4
TPM3-221ENST00000513769 H3BT86 120 aa6.31□□□□□ -1.4
TPM3-221ENST00000513769 ZNF73O43830 326 aaPredicted RBP6.31□□□□□ -1.4
TPM3-221ENST00000513769 PRO0461Q9UI25 63 aa6.31□□□□□ -1.4
TPM3-221ENST00000513769 STARD9Q9P2P6 4700 aa6.3□□□□□ -1.4
TPM3-221ENST00000513769 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.3□□□□□ -1.4
TPM3-221ENST00000513769 SLC25A20O43772 301 aa6.3□□□□□ -1.4
TPM3-221ENST00000513769 C6orf99Q4VX62 202 aa6.3□□□□□ -1.4
TPM3-221ENST00000513769 OCIAD2Q56VL3 154 aa6.3□□□□□ -1.4
TPM3-221ENST00000513769 MRPL55Q7Z7F7 128 aaKnown RBP6.3□□□□□ -1.4
TPM3-221ENST00000513769 ANKRD29Q8N6D5 301 aa6.3□□□□□ -1.4
TPM3-221ENST00000513769 DIRC1Q969H9 104 aa6.3□□□□□ -1.4
TPM3-221ENST00000513769 C9JAW5 83 aa6.29□□□□□ -1.4
TPM3-221ENST00000513769 DNAL4O96015 105 aa6.29□□□□□ -1.4
TPM3-221ENST00000513769 LINC00575Q6W349 94 aa6.29□□□□□ -1.4
TPM3-221ENST00000513769 C7orf33Q8WU49 177 aa6.29□□□□□ -1.4
TPM3-221ENST00000513769 LINC00167Q96N53 147 aa6.29□□□□□ -1.4
TPM3-221ENST00000513769 A0A096LNI7 61 aa6.28□□□□□ -1.4
TPM3-221ENST00000513769 hADV29S1A0JD25 119 aa6.28□□□□□ -1.4
TPM3-221ENST00000513769 TMEM256-PLSCR3K7ERE1 68 aa6.28□□□□□ -1.4
TPM3-221ENST00000513769 PRYO14603 147 aa6.28□□□□□ -1.4
TPM3-221ENST00000513769 SPRR1AP35321 89 aa6.28□□□□□ -1.4
TPM3-221ENST00000513769 SERTAD4-AS1Q5TG53 156 aa6.28□□□□□ -1.4
TPM3-221ENST00000513769 CLEC2BQ92478 149 aa6.28□□□□□ -1.4
TPM3-221ENST00000513769 BAALC-AS2P0C853 105 aa6.27□□□□□ -1.41
TPM3-221ENST00000513769 COX7BP24311 80 aa6.27□□□□□ -1.41
TPM3-221ENST00000513769 ELOF1P60002 83 aaKnown RBP6.27□□□□□ -1.41
TPM3-221ENST00000513769 KRTAP7-1Q8IUC3 87 aa6.27□□□□□ -1.41
TPM3-221ENST00000513769 DPH3Q96FX2 82 aa6.27□□□□□ -1.41
TPM3-221ENST00000513769 A0A1W2PNN7 141 aa6.26□□□□□ -1.41
TPM3-221ENST00000513769 J3QR89 54 aa6.26□□□□□ -1.41
TPM3-221ENST00000513769 RTL8CO15255 209 aa6.26□□□□□ -1.41
TPM3-221ENST00000513769 LINC00336Q6ZUF6 198 aa6.26□□□□□ -1.41
TPM3-221ENST00000513769 TEN1Q86WV5 123 aa6.26□□□□□ -1.41
TPM3-221ENST00000513769 FAM218AQ96MZ4 157 aa6.26□□□□□ -1.41
TPM3-221ENST00000513769 HYDINQ4G0P3 5121 aa6.26□□□□□ -1.41
TPM3-221ENST00000513769 IGLV5-52A0A0A0MRZ9 124 aa6.25□□□□□ -1.41
TPM3-221ENST00000513769 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.25□□□□□ -1.41
TPM3-221ENST00000513769 ORMDL1Q9P0S3 153 aa6.25□□□□□ -1.41
TPM3-221ENST00000513769 DHRS4-AS1Q9P1J3 65 aa6.25□□□□□ -1.41
TPM3-221ENST00000513769 PLECQ15149 4684 aaKnown RBP6.25□□□□□ -1.41
TPM3-221ENST00000513769 IGKV2-24A0A0C4DH68 120 aa6.24□□□□□ -1.41
TPM3-221ENST00000513769 FAM168BA1KXE4 195 aa6.24□□□□□ -1.41
TPM3-221ENST00000513769 KRTAP4-16G5E9R7 235 aaPredicted RBP6.24□□□□□ -1.41
TPM3-221ENST00000513769 H0Y9J4 135 aa6.24□□□□□ -1.41
TPM3-221ENST00000513769 K7ERU9 68 aa6.24□□□□□ -1.41
TPM3-221ENST00000513769 ETDBQ3ZM63 59 aa6.24□□□□□ -1.41
TPM3-221ENST00000513769 SPACA4Q8TDM5 124 aa6.24□□□□□ -1.41
TPM3-221ENST00000513769 A0A087WYN8 130 aa6.23□□□□□ -1.41
TPM3-221ENST00000513769 REG3GQ6UW15 175 aa6.23□□□□□ -1.41
TPM3-221ENST00000513769 FAM19A5Q7Z5A7 132 aaPredicted RBP6.23□□□□□ -1.41
TPM3-221ENST00000513769 PPDPFLQ8WWR9 84 aa6.23□□□□□ -1.41
TPM3-221ENST00000513769 RPL37AP8A6NKH3 93 aa6.22□□□□□ -1.41
TPM3-221ENST00000513769 JMJD7-PLA2G4BH0Y9G9 81 aa6.22□□□□□ -1.41
TPM3-221ENST00000513769 PLAC8Q9NZF1 115 aa6.22□□□□□ -1.41
TPM3-221ENST00000513769 ETDCA0A1B0GVM5 59 aa6.21□□□□□ -1.42
TPM3-221ENST00000513769 B5MCH6 92 aa6.21□□□□□ -1.42
TPM3-221ENST00000513769 Q6ZRX8 168 aa6.21□□□□□ -1.42
TPM3-221ENST00000513769 VPS13DQ5THJ4 4388 aa6.2□□□□□ -1.42
TPM3-221ENST00000513769 OBSCN-AS1Q96MR7 158 aa6.19□□□□□ -1.42
TPM3-221ENST00000513769 ALMS1Q8TCU4 4167 aa6.19□□□□□ -1.42
TPM3-221ENST00000513769 CHTF8P0CG12 524 aa6.18□□□□□ -1.42
TPM3-221ENST00000513769 UBE2BP63146 152 aa6.18□□□□□ -1.42
TPM3-221ENST00000513769 MTURNQ8N3F0 131 aa6.18□□□□□ -1.42
TPM3-221ENST00000513769 FRAS1Q86XX4 4008 aa6.17□□□□□ -1.42
TPM3-221ENST00000513769 PDE6GP18545 87 aa6.17□□□□□ -1.42
TPM3-221ENST00000513769 PHF5AQ7RTV0 110 aaKnown RBP6.17□□□□□ -1.42
TPM3-221ENST00000513769 ACYP1P07311 99 aa6.16□□□□□ -1.42
TPM3-221ENST00000513769 Q6ZQY7 126 aa6.16□□□□□ -1.42
TPM3-221ENST00000513769 TEX49A0A1B0GTD5 131 aa6.15□□□□□ -1.42
TPM3-221ENST00000513769 PANO1I0J062 215 aa6.15□□□□□ -1.42
TPM3-221ENST00000513769 BCE1O60756 84 aa6.15□□□□□ -1.42
TPM3-221ENST00000513769 RBM3P98179 157 aaKnown RBP6.15□□□□□ -1.42
TPM3-221ENST00000513769 Q6ZSA8 131 aa6.15□□□□□ -1.42
TPM3-221ENST00000513769 HERC2O95714 4834 aa6.14□□□□□ -1.43
TPM3-221ENST00000513769 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
TPM3-221ENST00000513769 FAM19A1Q7Z5A9 133 aa6.14□□□□□ -1.43
TPM3-221ENST00000513769 Q9BRP9 147 aa6.14□□□□□ -1.43
TPM3-221ENST00000513769 KMT2AQ03164 3969 aa6.14□□□□□ -1.43
TPM3-221ENST00000513769 IGLV5-48A0A075B6I7 105 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms