RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 SPANXB1Q9NS25 103 aaPredicted RBP4.21□□□□□ -1.74
HTT-212ENST00000513639 HINT1P49773 126 aaPredicted RBP4.2□□□□□ -1.74
HTT-212ENST00000513639 TPRXLQ17RH7 258 aa4.2□□□□□ -1.74
HTT-212ENST00000513639 FP248Q71RG6 208 aaPredicted RBP4.2□□□□□ -1.74
HTT-212ENST00000513639 SSBP3-AS1Q7Z2R9 100 aa4.2□□□□□ -1.74
HTT-212ENST00000513639 SLC7A5P1Q8MH63 180 aa4.2□□□□□ -1.74
HTT-212ENST00000513639 RETNLBQ9BQ08 111 aa4.2□□□□□ -1.74
HTT-212ENST00000513639 PPDPFQ9H3Y8 114 aa4.2□□□□□ -1.74
HTT-212ENST00000513639 KRTAP23-1A1A580 65 aa4.19□□□□□ -1.74
HTT-212ENST00000513639 C5orf52A6NGY3 159 aa4.19□□□□□ -1.74
HTT-212ENST00000513639 IGLV6-57P01721 117 aa4.19□□□□□ -1.74
HTT-212ENST00000513639 TSPEAR-AS2P59090 65 aa4.19□□□□□ -1.74
HTT-212ENST00000513639 LINC00483Q53H64 154 aa4.19□□□□□ -1.74
HTT-212ENST00000513639 GAGE2AQ6NT46 116 aa4.19□□□□□ -1.74
HTT-212ENST00000513639 DAND5Q8N907 189 aa4.19□□□□□ -1.74
HTT-212ENST00000513639 PMCHL2Q9BQD1 86 aa4.19□□□□□ -1.74
HTT-212ENST00000513639 E9PLD3 99 aa4.18□□□□□ -1.74
HTT-212ENST00000513639 TRIAP1O43715 76 aa4.18□□□□□ -1.74
HTT-212ENST00000513639 Q6ZRX8 168 aa4.18□□□□□ -1.74
HTT-212ENST00000513639 Q8NBF4 154 aa4.18□□□□□ -1.74
HTT-212ENST00000513639 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
HTT-212ENST00000513639 A0A0J9YXY3 114 aa4.17□□□□□ -1.74
HTT-212ENST00000513639 SYS1-DBNDD2H3BUS1 97 aa4.17□□□□□ -1.74
HTT-212ENST00000513639 PET117Q6UWS5 81 aa4.17□□□□□ -1.74
HTT-212ENST00000513639 TRAV23DV6A0A075B6W5 121 aa4.16□□□□□ -1.74
HTT-212ENST00000513639 IGLV9-49A0A0B4J1Y8 123 aa4.16□□□□□ -1.74
HTT-212ENST00000513639 SLC25A20O43772 301 aa4.16□□□□□ -1.74
HTT-212ENST00000513639 ZNF73O43830 326 aaPredicted RBP4.16□□□□□ -1.74
HTT-212ENST00000513639 TIMM17BO60830 172 aa4.16□□□□□ -1.74
HTT-212ENST00000513639 RPS29P62273 56 aaKnown RBP4.16□□□□□ -1.74
HTT-212ENST00000513639 ADAMTSL4-AS1Q5T5F5 129 aa4.16□□□□□ -1.74
HTT-212ENST00000513639 LINC00518Q8N0U6 118 aa4.16□□□□□ -1.74
HTT-212ENST00000513639 FAT4Q6V0I7 4981 aa4.15□□□□□ -1.74
HTT-212ENST00000513639 HIST1H2BKO60814 126 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 ERC2-IT1O76042 136 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 HIST1H2BJP06899 126 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 HIST1H2BOP23527 126 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 HIST1H2BBP33778 126 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 HIST1H2BDP58876 126 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 HIST1H2BCP62807 126 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 HIST2H2BEQ16778 126 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.15□□□□□ -1.75
HTT-212ENST00000513639 SLC25A34Q6PIV7 304 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 OR13C6PQ8NH95 151 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 COPS9Q8WXC6 57 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 HIST1H2BHQ93079 126 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 HIST1H2BNQ99877 126 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 HIST1H2BMQ99879 126 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 Q9BRP9 147 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 SPANXCQ9NY87 97 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 DHRS4-AS1Q9P1J3 65 aa4.15□□□□□ -1.75
HTT-212ENST00000513639 AKR1D1P51857 326 aa4.14□□□□□ -1.75
HTT-212ENST00000513639 MOBPQ13875 183 aa4.14□□□□□ -1.75
HTT-212ENST00000513639 LINC01545Q5VT33 79 aa4.14□□□□□ -1.75
HTT-212ENST00000513639 LINC00308Q8TCZ7 52 aa4.14□□□□□ -1.75
HTT-212ENST00000513639 MUC17Q685J3 4493 aa4.13□□□□□ -1.75
HTT-212ENST00000513639 ZNF815PA8K554 130 aa4.13□□□□□ -1.75
HTT-212ENST00000513639 NPC2P61916 151 aa4.13□□□□□ -1.75
HTT-212ENST00000513639 LCE3BQ5TA77 95 aa4.13□□□□□ -1.75
HTT-212ENST00000513639 SOSTDC1Q6X4U4 206 aa4.13□□□□□ -1.75
HTT-212ENST00000513639 SPANXDQ9BXN6 97 aa4.13□□□□□ -1.75
HTT-212ENST00000513639 C20orf202A1L168 122 aa4.12□□□□□ -1.75
HTT-212ENST00000513639 KRTAP13-3Q3SY46 172 aa4.12□□□□□ -1.75
HTT-212ENST00000513639 C9orf153Q5TBE3 101 aa4.12□□□□□ -1.75
HTT-212ENST00000513639 C3orf79P0CE67 100 aa4.11□□□□□ -1.75
HTT-212ENST00000513639 IFITM1P13164 125 aa4.11□□□□□ -1.75
HTT-212ENST00000513639 SEC61BP60468 96 aaKnown RBP4.11□□□□□ -1.75
HTT-212ENST00000513639 COA6Q5JTJ3 125 aaKnown RBP4.11□□□□□ -1.75
HTT-212ENST00000513639 SCGB1D4Q6XE38 83 aa4.11□□□□□ -1.75
HTT-212ENST00000513639 Q6ZVH6 145 aa4.11□□□□□ -1.75
HTT-212ENST00000513639 Q8N377 158 aa4.11□□□□□ -1.75
HTT-212ENST00000513639 LITAFQ99732 161 aa4.11□□□□□ -1.75
HTT-212ENST00000513639 LAMTOR3Q9UHA4 124 aa4.11□□□□□ -1.75
HTT-212ENST00000513639 TRBV7-6A0A0J9YX20 115 aa4.1□□□□□ -1.75
HTT-212ENST00000513639 SPRR1BP22528 89 aa4.1□□□□□ -1.75
HTT-212ENST00000513639 COX7BP24311 80 aa4.1□□□□□ -1.75
HTT-212ENST00000513639 KRTDAPP60985 99 aa4.1□□□□□ -1.75
HTT-212ENST00000513639 TAL2Q16559 108 aa4.1□□□□□ -1.75
HTT-212ENST00000513639 ASB16-AS1Q495Z4 193 aa4.1□□□□□ -1.75
HTT-212ENST00000513639 ST20-AS1Q8NBB2 130 aa4.1□□□□□ -1.75
HTT-212ENST00000513639 SNRPEP62304 92 aaKnown RBP4.09□□□□□ -1.75
HTT-212ENST00000513639 LIMD2Q9BT23 127 aa4.09□□□□□ -1.75
HTT-212ENST00000513639 TEX49A0A1B0GTD5 131 aa4.08□□□□□ -1.76
HTT-212ENST00000513639 A4D1N5 150 aa4.08□□□□□ -1.76
HTT-212ENST00000513639 A6NDN8 102 aa4.08□□□□□ -1.76
HTT-212ENST00000513639 ELOF1P60002 83 aaKnown RBP4.08□□□□□ -1.76
HTT-212ENST00000513639 C6orf99Q4VX62 202 aa4.08□□□□□ -1.76
HTT-212ENST00000513639 A0A1B0GWB2 263 aa4.07□□□□□ -1.76
HTT-212ENST00000513639 CD164Q04900 197 aa4.07□□□□□ -1.76
HTT-212ENST00000513639 KRTAP19-1Q8IUB9 90 aa4.07□□□□□ -1.76
HTT-212ENST00000513639 DEFB105AQ8NG35 78 aa4.07□□□□□ -1.76
HTT-212ENST00000513639 TTTY13Q9BZ97 58 aa4.07□□□□□ -1.76
HTT-212ENST00000513639 PRO1933Q9H354 126 aa4.07□□□□□ -1.76
HTT-212ENST00000513639 TRAV13-2A0A0B4J235 113 aa4.06□□□□□ -1.76
HTT-212ENST00000513639 VAMP3Q15836 100 aa4.06□□□□□ -1.76
HTT-212ENST00000513639 MUSTN1Q8IVN3 82 aa4.06□□□□□ -1.76
HTT-212ENST00000513639 NHP2Q9NX24 153 aaKnown RBP4.06□□□□□ -1.76
HTT-212ENST00000513639 H7C2G1 150 aa4.05□□□□□ -1.76
HTT-212ENST00000513639 LINC01547P58512 204 aaPredicted RBP4.05□□□□□ -1.76
HTT-212ENST00000513639 HRCT1Q6UXD1 115 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms