RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 ZNF73O43830 326 aaPredicted RBP13.97□□□□□ -0.17
CLDND1-226ENST00000513287 LGALS3P17931 250 aaKnown RBP13.97□□□□□ -0.17
CLDND1-226ENST00000513287 SERF1AO75920 110 aa13.96□□□□□ -0.17
CLDND1-226ENST00000513287 IGKCP01834 107 aa13.96□□□□□ -0.17
CLDND1-226ENST00000513287 TRGC2P03986 189 aa13.96□□□□□ -0.17
CLDND1-226ENST00000513287 LCE2DQ5TA82 110 aaPredicted RBP13.95□□□□□ -0.18
CLDND1-226ENST00000513287 HINT1P49773 126 aaPredicted RBP13.92□□□□□ -0.18
CLDND1-226ENST00000513287 C9orf153Q5TBE3 101 aa13.92□□□□□ -0.18
CLDND1-226ENST00000513287 SOSTDC1Q6X4U4 206 aa13.92□□□□□ -0.18
CLDND1-226ENST00000513287 SPRR1BP22528 89 aa13.91□□□□□ -0.18
CLDND1-226ENST00000513287 A0A0J9YXY3 114 aa13.9□□□□□ -0.18
CLDND1-226ENST00000513287 ADAMTSL4-AS1Q5T5F5 129 aa13.9□□□□□ -0.18
CLDND1-226ENST00000513287 E9PLD3 99 aa13.89□□□□□ -0.19
CLDND1-226ENST00000513287 EIF4EBP3O60516 100 aaPredicted RBP13.89□□□□□ -0.19
CLDND1-226ENST00000513287 FABP4P15090 132 aa13.88□□□□□ -0.19
CLDND1-226ENST00000513287 SLC25A34Q6PIV7 304 aa13.88□□□□□ -0.19
CLDND1-226ENST00000513287 PMCHL2Q9BQD1 86 aa13.88□□□□□ -0.19
CLDND1-226ENST00000513287 ST20-AS1Q8NBB2 130 aa13.87□□□□□ -0.19
CLDND1-226ENST00000513287 LIMD2Q9BT23 127 aa13.85□□□□□ -0.19
CLDND1-226ENST00000513287 SPANXCQ9NY87 97 aa13.85□□□□□ -0.19
CLDND1-226ENST00000513287 DHRS4-AS1Q9P1J3 65 aa13.84□□□□□ -0.19
CLDND1-226ENST00000513287 TIMM17BO60830 172 aa13.82□□□□□ -0.2
CLDND1-226ENST00000513287 LCE2CQ5TA81 110 aa13.82□□□□□ -0.2
CLDND1-226ENST00000513287 NPC2P61916 151 aa13.81□□□□□ -0.2
CLDND1-226ENST00000513287 LITAFQ99732 161 aa13.81□□□□□ -0.2
CLDND1-226ENST00000513287 LINC00308Q8TCZ7 52 aa13.8□□□□□ -0.2
CLDND1-226ENST00000513287 SPANXDQ9BXN6 97 aa13.78□□□□□ -0.2
CLDND1-226ENST00000513287 LAMTOR3Q9UHA4 124 aa13.78□□□□□ -0.2
CLDND1-226ENST00000513287 CD164Q04900 197 aa13.77□□□□□ -0.21
CLDND1-226ENST00000513287 KRTAP19-2Q3LHN2 52 aa13.76□□□□□ -0.21
CLDND1-226ENST00000513287 LINC00518Q8N0U6 118 aa13.75□□□□□ -0.21
CLDND1-226ENST00000513287 OR13C6PQ8NH95 151 aa13.75□□□□□ -0.21
CLDND1-226ENST00000513287 COLCA2A8K830 154 aa13.74□□□□□ -0.21
CLDND1-226ENST00000513287 ELOF1P60002 83 aaKnown RBP13.74□□□□□ -0.21
CLDND1-226ENST00000513287 SYS1-DBNDD2H3BUS1 97 aa13.73□□□□□ -0.21
CLDND1-226ENST00000513287 Q5XG85 94 aa13.72□□□□□ -0.21
CLDND1-226ENST00000513287 TRBV7-6A0A0J9YX20 115 aa13.69□□□□□ -0.22
CLDND1-226ENST00000513287 COX7BP24311 80 aa13.69□□□□□ -0.22
CLDND1-226ENST00000513287 PCOTHQ58A44 107 aa13.69□□□□□ -0.22
CLDND1-226ENST00000513287 LINC01545Q5VT33 79 aa13.69□□□□□ -0.22
CLDND1-226ENST00000513287 PRO1933Q9H354 126 aa13.68□□□□□ -0.22
CLDND1-226ENST00000513287 C6orf99Q4VX62 202 aa13.67□□□□□ -0.22
CLDND1-226ENST00000513287 HRCT1Q6UXD1 115 aa13.67□□□□□ -0.22
CLDND1-226ENST00000513287 TEX49A0A1B0GTD5 131 aa13.66□□□□□ -0.22
CLDND1-226ENST00000513287 CRCT1Q9UGL9 99 aa13.66□□□□□ -0.22
CLDND1-226ENST00000513287 IGLV8-61A0A075B6I0 122 aa13.65□□□□□ -0.22
CLDND1-226ENST00000513287 ZNF815PA8K554 130 aa13.65□□□□□ -0.22
CLDND1-226ENST00000513287 CFC1BP0CG36 223 aa13.65□□□□□ -0.22
CLDND1-226ENST00000513287 MT1HP80294 61 aa13.65□□□□□ -0.22
CLDND1-226ENST00000513287 TAL2Q16559 108 aa13.65□□□□□ -0.22
CLDND1-226ENST00000513287 PET117Q6UWS5 81 aa13.65□□□□□ -0.22
CLDND1-226ENST00000513287 FSIP2Q5CZC0 6907 aa13.63□□□□□ -0.23
CLDND1-226ENST00000513287 C9orf92A6NGG3 77 aa13.62□□□□□ -0.23
CLDND1-226ENST00000513287 H7C2G1 150 aa13.61□□□□□ -0.23
CLDND1-226ENST00000513287 AKR1D1P51857 326 aa13.61□□□□□ -0.23
CLDND1-226ENST00000513287 Q1RN00 199 aa13.6□□□□□ -0.23
CLDND1-226ENST00000513287 SMIM29Q86T20 159 aa13.6□□□□□ -0.23
CLDND1-226ENST00000513287 IGLV5-48A0A075B6I7 105 aa13.59□□□□□ -0.23
CLDND1-226ENST00000513287 A0A1B0GWB2 263 aa13.59□□□□□ -0.23
CLDND1-226ENST00000513287 HIST1H2BKO60814 126 aa13.59□□□□□ -0.23
CLDND1-226ENST00000513287 HIST1H2BJP06899 126 aa13.59□□□□□ -0.23
CLDND1-226ENST00000513287 HIST1H2BOP23527 126 aa13.59□□□□□ -0.23
CLDND1-226ENST00000513287 HIST1H2BBP33778 126 aa13.59□□□□□ -0.23
CLDND1-226ENST00000513287 HIST1H2BDP58876 126 aa13.59□□□□□ -0.23
CLDND1-226ENST00000513287 HIST1H2BCP62807 126 aa13.59□□□□□ -0.23
CLDND1-226ENST00000513287 HIST2H2BEQ16778 126 aa13.59□□□□□ -0.23
CLDND1-226ENST00000513287 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.59□□□□□ -0.23
CLDND1-226ENST00000513287 COPS9Q8WXC6 57 aa13.59□□□□□ -0.23
CLDND1-226ENST00000513287 HIST1H2BHQ93079 126 aa13.59□□□□□ -0.23
CLDND1-226ENST00000513287 HIST1H2BNQ99877 126 aa13.59□□□□□ -0.23
CLDND1-226ENST00000513287 HIST1H2BMQ99879 126 aa13.59□□□□□ -0.23
CLDND1-226ENST00000513287 DEFB105AQ8NG35 78 aa13.57□□□□□ -0.24
CLDND1-226ENST00000513287 C1orf195Q5TG92 126 aa13.56□□□□□ -0.24
CLDND1-226ENST00000513287 TTTY13Q9BZ97 58 aa13.56□□□□□ -0.24
CLDND1-226ENST00000513287 IFITM1P13164 125 aa13.55□□□□□ -0.24
CLDND1-226ENST00000513287 Q6ZVH6 145 aa13.55□□□□□ -0.24
CLDND1-226ENST00000513287 A4D1N5 150 aa13.54□□□□□ -0.24
CLDND1-226ENST00000513287 C3orf79P0CE67 100 aa13.51□□□□□ -0.25
CLDND1-226ENST00000513287 SLC7A5P1Q8MH63 180 aa13.51□□□□□ -0.25
CLDND1-226ENST00000513287 LORP23490 312 aaPredicted RBP13.5□□□□□ -0.25
CLDND1-226ENST00000513287 RPL37P61927 97 aaKnown RBP13.49□□□□□ -0.25
CLDND1-226ENST00000513287 SCGB1D4Q6XE38 83 aa13.49□□□□□ -0.25
CLDND1-226ENST00000513287 NHP2Q9NX24 153 aaKnown RBP13.48□□□□□ -0.25
CLDND1-226ENST00000513287 A6NDN8 102 aa13.45□□□□□ -0.26
CLDND1-226ENST00000513287 KRTAP10-6P60371 365 aaPredicted RBP13.45□□□□□ -0.26
CLDND1-226ENST00000513287 COA6Q5JTJ3 125 aaKnown RBP13.45□□□□□ -0.26
CLDND1-226ENST00000513287 TCL1BO95988 128 aa13.43□□□□□ -0.26
CLDND1-226ENST00000513287 TRAV13-2A0A0B4J235 113 aa13.41□□□□□ -0.26
CLDND1-226ENST00000513287 MUSTN1Q8IVN3 82 aa13.41□□□□□ -0.26
CLDND1-226ENST00000513287 C20orf202A1L168 122 aa13.39□□□□□ -0.27
CLDND1-226ENST00000513287 KRTDAPP60985 99 aa13.39□□□□□ -0.27
CLDND1-226ENST00000513287 ANKRD39Q53RE8 183 aa13.39□□□□□ -0.27
CLDND1-226ENST00000513287 A0A0G2JQZ4 141 aa13.38□□□□□ -0.27
CLDND1-226ENST00000513287 SMIM11BQ8TCY0 68 aa13.37□□□□□ -0.27
CLDND1-226ENST00000513287 M0R2T5 61 aa13.32□□□□□ -0.28
CLDND1-226ENST00000513287 SNRPEP62304 92 aaKnown RBP13.32□□□□□ -0.28
CLDND1-226ENST00000513287 PCP2Q8IVA1 136 aa13.32□□□□□ -0.28
CLDND1-226ENST00000513287 FLGP20930 4061 aaPredicted RBP13.31□□□□□ -0.28
CLDND1-226ENST00000513287 F8WEM9 126 aa13.31□□□□□ -0.28
CLDND1-226ENST00000513287 VAMP3Q15836 100 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms