RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 LINC01600Q96MT4 127 aa6.69□□□□□ -1.34
PDLIM5-217ENST00000512274 CBY1Q9Y3M2 126 aa6.69□□□□□ -1.34
PDLIM5-217ENST00000512274 LOC107984640A0A0U1RRK4 108 aa6.68□□□□□ -1.34
PDLIM5-217ENST00000512274 TRIAP1O43715 76 aa6.68□□□□□ -1.34
PDLIM5-217ENST00000512274 VPREB1P12018 145 aa6.68□□□□□ -1.34
PDLIM5-217ENST00000512274 Q6ZRP5 223 aa6.68□□□□□ -1.34
PDLIM5-217ENST00000512274 M0QXV9 152 aa6.67□□□□□ -1.34
PDLIM5-217ENST00000512274 IGLV6-57P01721 117 aa6.67□□□□□ -1.34
PDLIM5-217ENST00000512274 FAT3Q8TDW7 4589 aa6.67□□□□□ -1.34
PDLIM5-217ENST00000512274 LRP2P98164 4655 aa6.66□□□□□ -1.34
PDLIM5-217ENST00000512274 H0YGX0 51 aa6.66□□□□□ -1.34
PDLIM5-217ENST00000512274 Q1RN00 199 aa6.66□□□□□ -1.34
PDLIM5-217ENST00000512274 C9orf163Q8N9P6 203 aa6.66□□□□□ -1.34
PDLIM5-217ENST00000512274 NAA38Q9BRA0 125 aaKnown RBP6.66□□□□□ -1.34
PDLIM5-217ENST00000512274 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.65□□□□□ -1.34
PDLIM5-217ENST00000512274 A0A1B0GX51 115 aa6.65□□□□□ -1.34
PDLIM5-217ENST00000512274 F8W1H4 67 aa6.65□□□□□ -1.34
PDLIM5-217ENST00000512274 M0R378 163 aa6.65□□□□□ -1.34
PDLIM5-217ENST00000512274 RPL37AP61513 92 aaKnown RBP6.65□□□□□ -1.34
PDLIM5-217ENST00000512274 C9orf129Q5T035 196 aaKnown RBP6.65□□□□□ -1.34
PDLIM5-217ENST00000512274 Q8NDZ9 215 aa6.65□□□□□ -1.34
PDLIM5-217ENST00000512274 CIRBP-AS1Q8TBR5 109 aa6.65□□□□□ -1.34
PDLIM5-217ENST00000512274 TRBV7-6A0A0J9YX20 115 aa6.64□□□□□ -1.35
PDLIM5-217ENST00000512274 LST1O00453 97 aa6.64□□□□□ -1.35
PDLIM5-217ENST00000512274 TCL1BO95988 128 aa6.64□□□□□ -1.35
PDLIM5-217ENST00000512274 TRACP01848 142 aa6.64□□□□□ -1.35
PDLIM5-217ENST00000512274 PSMB2P49721 201 aa6.64□□□□□ -1.35
PDLIM5-217ENST00000512274 ATXN8Q156A1 80 aa6.64□□□□□ -1.35
PDLIM5-217ENST00000512274 SMIM11BQ8TCY0 68 aa6.64□□□□□ -1.35
PDLIM5-217ENST00000512274 SCGB1C2P0DMR2 95 aa6.63□□□□□ -1.35
PDLIM5-217ENST00000512274 XAGE1AQ9HD64 81 aa6.63□□□□□ -1.35
PDLIM5-217ENST00000512274 LINC00474Q9P2X8 69 aa6.63□□□□□ -1.35
PDLIM5-217ENST00000512274 PRO0461Q9UI25 63 aa6.63□□□□□ -1.35
PDLIM5-217ENST00000512274 H7C2G1 150 aa6.62□□□□□ -1.35
PDLIM5-217ENST00000512274 LCE2CQ5TA81 110 aa6.62□□□□□ -1.35
PDLIM5-217ENST00000512274 H3BMG7 143 aa6.61□□□□□ -1.35
PDLIM5-217ENST00000512274 RPL18AQ02543 176 aaKnown RBP6.61□□□□□ -1.35
PDLIM5-217ENST00000512274 GAGE2EQ4V326 116 aa6.61□□□□□ -1.35
PDLIM5-217ENST00000512274 S100A7L2Q5SY68 101 aa6.61□□□□□ -1.35
PDLIM5-217ENST00000512274 GAGE2DQ9UEU5 116 aa6.61□□□□□ -1.35
PDLIM5-217ENST00000512274 OR13C6PQ8NH95 151 aa6.6□□□□□ -1.35
PDLIM5-217ENST00000512274 KCNQ1DNQ9H478 68 aa6.6□□□□□ -1.35
PDLIM5-217ENST00000512274 TRBV10-3A0A0K0K1G6 114 aa6.59□□□□□ -1.35
PDLIM5-217ENST00000512274 H3BT86 120 aa6.59□□□□□ -1.35
PDLIM5-217ENST00000512274 NCR3O14931 201 aa6.59□□□□□ -1.35
PDLIM5-217ENST00000512274 PRR3P79522 188 aaKnown RBP6.59□□□□□ -1.35
PDLIM5-217ENST00000512274 SDIM1Q6ZPB5 146 aa6.59□□□□□ -1.35
PDLIM5-217ENST00000512274 TRAV23DV6A0A075B6W5 121 aa6.58□□□□□ -1.36
PDLIM5-217ENST00000512274 NKAPP1Q8N9T2 125 aa6.58□□□□□ -1.36
PDLIM5-217ENST00000512274 LINC00167Q96N53 147 aa6.58□□□□□ -1.36
PDLIM5-217ENST00000512274 A0A096LNI7 61 aa6.57□□□□□ -1.36
PDLIM5-217ENST00000512274 PRYO14603 147 aa6.57□□□□□ -1.36
PDLIM5-217ENST00000512274 ZNF73O43830 326 aaPredicted RBP6.57□□□□□ -1.36
PDLIM5-217ENST00000512274 SPRR1AP35321 89 aa6.57□□□□□ -1.36
PDLIM5-217ENST00000512274 GAGE2BQ13066 116 aa6.57□□□□□ -1.36
PDLIM5-217ENST00000512274 KRTAP7-1Q8IUC3 87 aa6.57□□□□□ -1.36
PDLIM5-217ENST00000512274 PKHD1L1Q86WI1 4243 aa6.57□□□□□ -1.36
PDLIM5-217ENST00000512274 IGLV1-50A0A075B6I6 118 aa6.56□□□□□ -1.36
PDLIM5-217ENST00000512274 H3BQ85 93 aa6.56□□□□□ -1.36
PDLIM5-217ENST00000512274 ELOF1P60002 83 aaKnown RBP6.56□□□□□ -1.36
PDLIM5-217ENST00000512274 C6orf99Q4VX62 202 aa6.56□□□□□ -1.36
PDLIM5-217ENST00000512274 C7orf33Q8WU49 177 aa6.56□□□□□ -1.36
PDLIM5-217ENST00000512274 DIRC1Q969H9 104 aa6.56□□□□□ -1.36
PDLIM5-217ENST00000512274 KRTAP4-16G5E9R7 235 aaPredicted RBP6.55□□□□□ -1.36
PDLIM5-217ENST00000512274 SLC25A20O43772 301 aa6.55□□□□□ -1.36
PDLIM5-217ENST00000512274 SNCGO76070 127 aa6.55□□□□□ -1.36
PDLIM5-217ENST00000512274 SMCPP49901 116 aaPredicted RBP6.55□□□□□ -1.36
PDLIM5-217ENST00000512274 MRPL55Q7Z7F7 128 aaKnown RBP6.55□□□□□ -1.36
PDLIM5-217ENST00000512274 CLEC2BQ92478 149 aa6.55□□□□□ -1.36
PDLIM5-217ENST00000512274 FAM218AQ96MZ4 157 aa6.55□□□□□ -1.36
PDLIM5-217ENST00000512274 C22orf24Q9Y442 160 aa6.55□□□□□ -1.36
PDLIM5-217ENST00000512274 LINC00575Q6W349 94 aa6.54□□□□□ -1.36
PDLIM5-217ENST00000512274 ANKRD29Q8N6D5 301 aa6.54□□□□□ -1.36
PDLIM5-217ENST00000512274 SPACA4Q8TDM5 124 aa6.54□□□□□ -1.36
PDLIM5-217ENST00000512274 C9JAW5 83 aa6.53□□□□□ -1.36
PDLIM5-217ENST00000512274 GHRHP01286 108 aa6.53□□□□□ -1.36
PDLIM5-217ENST00000512274 TEN1Q86WV5 123 aa6.53□□□□□ -1.36
PDLIM5-217ENST00000512274 OCIAD2Q56VL3 154 aa6.52□□□□□ -1.37
PDLIM5-217ENST00000512274 A0A087WYN8 130 aa6.51□□□□□ -1.37
PDLIM5-217ENST00000512274 A0A1W2PNN7 141 aa6.51□□□□□ -1.37
PDLIM5-217ENST00000512274 FAM168BA1KXE4 195 aa6.51□□□□□ -1.37
PDLIM5-217ENST00000512274 PANO1I0J062 215 aa6.51□□□□□ -1.37
PDLIM5-217ENST00000512274 DNAL4O96015 105 aa6.51□□□□□ -1.37
PDLIM5-217ENST00000512274 COX7BP24311 80 aa6.51□□□□□ -1.37
PDLIM5-217ENST00000512274 TNXBP22105 4242 aa6.5□□□□□ -1.37
PDLIM5-217ENST00000512274 H0Y9J4 135 aa6.5□□□□□ -1.37
PDLIM5-217ENST00000512274 CHTF8P0CG12 524 aa6.5□□□□□ -1.37
PDLIM5-217ENST00000512274 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.5□□□□□ -1.37
PDLIM5-217ENST00000512274 IGKV2-24A0A0C4DH68 120 aa6.49□□□□□ -1.37
PDLIM5-217ENST00000512274 hADV29S1A0JD25 119 aa6.49□□□□□ -1.37
PDLIM5-217ENST00000512274 Q6ZRX8 168 aa6.49□□□□□ -1.37
PDLIM5-217ENST00000512274 FAM19A5Q7Z5A7 132 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-217ENST00000512274 PPDPFLQ8WWR9 84 aa6.49□□□□□ -1.37
PDLIM5-217ENST00000512274 PLAC8Q9NZF1 115 aa6.49□□□□□ -1.37
PDLIM5-217ENST00000512274 ORMDL1Q9P0S3 153 aa6.49□□□□□ -1.37
PDLIM5-217ENST00000512274 DHRS4-AS1Q9P1J3 65 aa6.49□□□□□ -1.37
PDLIM5-217ENST00000512274 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-217ENST00000512274 ETDBQ3ZM63 59 aa6.48□□□□□ -1.37
PDLIM5-217ENST00000512274 B5MCH6 92 aa6.47□□□□□ -1.37
PDLIM5-217ENST00000512274 J3QR89 54 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms