RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	HIST1H2BB	P33778	126 aa		3.08	□□□□□ -1.92
MATR3-218	ENST00000511978	HIST1H2BD	P58876	126 aa		3.08	□□□□□ -1.92
MATR3-218	ENST00000511978	HIST1H2BC	P62807	126 aa		3.08	□□□□□ -1.92
MATR3-218	ENST00000511978	HIST2H2BE	Q16778	126 aa		3.08	□□□□□ -1.92
MATR3-218	ENST00000511978	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	3.08	□□□□□ -1.92
MATR3-218	ENST00000511978	HIST1H2BH	Q93079	126 aa		3.08	□□□□□ -1.92
MATR3-218	ENST00000511978	HIST1H2BN	Q99877	126 aa		3.08	□□□□□ -1.92
MATR3-218	ENST00000511978	HIST1H2BM	Q99879	126 aa		3.08	□□□□□ -1.92
MATR3-218	ENST00000511978	HSPB8	Q9UJY1	196 aa		3.08	□□□□□ -1.92
MATR3-218	ENST00000511978	PLN	P26678	52 aa		3.07	□□□□□ -1.92
MATR3-218	ENST00000511978	PFN2	P35080	140 aa		3.07	□□□□□ -1.92
MATR3-218	ENST00000511978	UBE2B	P63146	152 aa		3.07	□□□□□ -1.92
MATR3-218	ENST00000511978	C1orf137	Q5JT78	98 aa		3.07	□□□□□ -1.92
MATR3-218	ENST00000511978	SFTA2	Q6UW10	78 aa		3.07	□□□□□ -1.92
MATR3-218	ENST00000511978	ZNF625	Q96I27	306 aa	Predicted RBP	3.07	□□□□□ -1.92
MATR3-218	ENST00000511978	PSORS1C2	Q9UIG4	136 aa		3.07	□□□□□ -1.92
MATR3-218	ENST00000511978	ERG28	Q9UKR5	140 aa		3.07	□□□□□ -1.92
MATR3-218	ENST00000511978	MYCBP2	O75592	4640 aa		3.07	□□□□□ -1.92
MATR3-218	ENST00000511978	PKHD1L1	Q86WI1	4243 aa		3.07	□□□□□ -1.92
MATR3-218	ENST00000511978	OBSCN	Q5VST9	7968 aa		3.06	□□□□□ -1.92
MATR3-218	ENST00000511978	OXT	P01178	125 aa		3.06	□□□□□ -1.92
MATR3-218	ENST00000511978	RPL13A	P40429	203 aa	Known RBP	3.06	□□□□□ -1.92
MATR3-218	ENST00000511978	FLG2	Q5D862	2391 aa	Predicted RBP	3.06	□□□□□ -1.92
MATR3-218	ENST00000511978	SPINK6	Q6UWN8	80 aa		3.06	□□□□□ -1.92
MATR3-218	ENST00000511978	PMCHL2	Q9BQD1	86 aa		3.06	□□□□□ -1.92
MATR3-218	ENST00000511978	MAP1LC3C	Q9BXW4	147 aa		3.06	□□□□□ -1.92
MATR3-218	ENST00000511978	TP73-AS1	Q9UF72	201 aa		3.06	□□□□□ -1.92
MATR3-218	ENST00000511978	DPM2	O94777	84 aa		3.05	□□□□□ -1.92
MATR3-218	ENST00000511978	IGKC	P01834	107 aa		3.05	□□□□□ -1.92
MATR3-218	ENST00000511978	IGLV7-43	P04211	117 aa		3.05	□□□□□ -1.92
MATR3-218	ENST00000511978	S100A1	P23297	94 aa		3.05	□□□□□ -1.92
MATR3-218	ENST00000511978	TSPEAR-AS2	P59090	65 aa		3.05	□□□□□ -1.92
MATR3-218	ENST00000511978	HERVK_113	P61574	105 aa		3.05	□□□□□ -1.92
MATR3-218	ENST00000511978	COX17	Q14061	63 aa		3.05	□□□□□ -1.92
MATR3-218	ENST00000511978	COA6	Q5JTJ3	125 aa	Known RBP	3.05	□□□□□ -1.92
MATR3-218	ENST00000511978	MRPL55	Q7Z7F7	128 aa	Known RBP	3.05	□□□□□ -1.92
MATR3-218	ENST00000511978	SND1-IT1	Q9HBX3	110 aa		3.05	□□□□□ -1.92
MATR3-218	ENST00000511978	NDUFA12	Q9UI09	145 aa		3.05	□□□□□ -1.92
MATR3-218	ENST00000511978	C22orf24	Q9Y442	160 aa		3.05	□□□□□ -1.92
MATR3-218	ENST00000511978	SYS1-DBNDD2	H3BUS1	97 aa		3.04	□□□□□ -1.92
MATR3-218	ENST00000511978	LEPROT	O15243	131 aa		3.04	□□□□□ -1.92
MATR3-218	ENST00000511978	LGALS3	P17931	250 aa	Known RBP	3.04	□□□□□ -1.92
MATR3-218	ENST00000511978	LINC00158	P58513	81 aa		3.04	□□□□□ -1.92
MATR3-218	ENST00000511978	MEIG1	Q5JSS6	88 aa		3.04	□□□□□ -1.92
MATR3-218	ENST00000511978	PLEKHB2	Q96CS7	222 aa		3.04	□□□□□ -1.92
MATR3-218	ENST00000511978	MYMX	A0A1B0GTQ4	84 aa		3.03	□□□□□ -1.92
MATR3-218	ENST00000511978		J3QQQ9	107 aa		3.03	□□□□□ -1.92
MATR3-218	ENST00000511978	SMIM13	P0DJ93	91 aa		3.03	□□□□□ -1.92
MATR3-218	ENST00000511978	MT1HL1	P0DM35	61 aa		3.03	□□□□□ -1.92
MATR3-218	ENST00000511978	NMU	P48645	174 aa		3.03	□□□□□ -1.92
MATR3-218	ENST00000511978	LINC01545	Q5VT33	79 aa		3.03	□□□□□ -1.92
MATR3-218	ENST00000511978	CAMK2N1	Q7Z7J9	78 aa		3.03	□□□□□ -1.92
MATR3-218	ENST00000511978		Q8NDZ9	215 aa		3.03	□□□□□ -1.92
MATR3-218	ENST00000511978	LCE3D	Q9BYE3	92 aa		3.03	□□□□□ -1.92
MATR3-218	ENST00000511978	DMBT1	Q9UGM3	2413 aa	Predicted RBP	3.03	□□□□□ -1.92
MATR3-218	ENST00000511978	LRP1	Q07954	4544 aa	Known RBP	3.03	□□□□□ -1.92
MATR3-218	ENST00000511978	FAT3	Q8TDW7	4589 aa		3.02	□□□□□ -1.93
MATR3-218	ENST00000511978	IGKV2-28	A0A075B6P5	120 aa		3.02	□□□□□ -1.93
MATR3-218	ENST00000511978	BCE1	O60756	84 aa		3.02	□□□□□ -1.93
MATR3-218	ENST00000511978	IGKV2D-28	P01615	120 aa		3.02	□□□□□ -1.93
MATR3-218	ENST00000511978	C3orf79	P0CE67	100 aa		3.02	□□□□□ -1.93
MATR3-218	ENST00000511978	KRTDAP	P60985	99 aa		3.02	□□□□□ -1.93
MATR3-218	ENST00000511978	MIR7-3HG	Q8N6C7	128 aa		3.02	□□□□□ -1.93
MATR3-218	ENST00000511978	DIRC1	Q969H9	104 aa		3.02	□□□□□ -1.93
MATR3-218	ENST00000511978	LINC01600	Q96MT4	127 aa		3.02	□□□□□ -1.93
MATR3-218	ENST00000511978	HERC1	Q15751	4861 aa		3.01	□□□□□ -1.93
MATR3-218	ENST00000511978	C20orf202	A1L168	122 aa		3.01	□□□□□ -1.93
MATR3-218	ENST00000511978	LINC00587	B1AMM8	73 aa		3.01	□□□□□ -1.93
MATR3-218	ENST00000511978	NCR3	O14931	201 aa		3.01	□□□□□ -1.93
MATR3-218	ENST00000511978	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.01	□□□□□ -1.93
MATR3-218	ENST00000511978	DAND5	Q8N907	189 aa		3.01	□□□□□ -1.93
MATR3-218	ENST00000511978	KRTAP4-3	Q9BYR4	195 aa		3.01	□□□□□ -1.93
MATR3-218	ENST00000511978	IGLV1-50	A0A075B6I6	118 aa		3	□□□□□ -1.93
MATR3-218	ENST00000511978	IGKV2D-26	A0A0A0MRZ7	120 aa		3	□□□□□ -1.93
MATR3-218	ENST00000511978	TMEM238	C9JI98	176 aa		3	□□□□□ -1.93
MATR3-218	ENST00000511978	RPL28	P46779	137 aa	Known RBP	3	□□□□□ -1.93
MATR3-218	ENST00000511978	UBE2A	P49459	152 aa		3	□□□□□ -1.93
MATR3-218	ENST00000511978	BOD1L2	Q8IYS8	172 aa		3	□□□□□ -1.93
MATR3-218	ENST00000511978	HIST3H2BB	Q8N257	126 aa		3	□□□□□ -1.93
MATR3-218	ENST00000511978	TMEM126A	Q9H061	195 aa		3	□□□□□ -1.93
MATR3-218	ENST00000511978	ZNF815P	A8K554	130 aa		2.99	□□□□□ -1.93
MATR3-218	ENST00000511978		M0R378	163 aa		2.99	□□□□□ -1.93
MATR3-218	ENST00000511978	S100A6	P06703	90 aa		2.99	□□□□□ -1.93
MATR3-218	ENST00000511978	S100A2	P29034	98 aa		2.99	□□□□□ -1.93
MATR3-218	ENST00000511978	PRLH	P81277	87 aa		2.99	□□□□□ -1.93
MATR3-218	ENST00000511978	FAM19A1	Q7Z5A9	133 aa		2.99	□□□□□ -1.93
MATR3-218	ENST00000511978	KRTAP13-1	Q8IUC0	172 aa		2.99	□□□□□ -1.93
MATR3-218	ENST00000511978	ATOH7	Q8N100	152 aa		2.99	□□□□□ -1.93
MATR3-218	ENST00000511978	HIST1H2BL	Q99880	126 aa		2.99	□□□□□ -1.93
MATR3-218	ENST00000511978	MIEN1	Q9BRT3	115 aa		2.99	□□□□□ -1.93
MATR3-218	ENST00000511978	TTTY13	Q9BZ97	58 aa		2.99	□□□□□ -1.93
MATR3-218	ENST00000511978	LOC107984156	A0A0G2JMH3	177 aa		2.98	□□□□□ -1.93
MATR3-218	ENST00000511978	AKR1D1	P51857	326 aa		2.98	□□□□□ -1.93
MATR3-218	ENST00000511978	NPC2	P61916	151 aa		2.98	□□□□□ -1.93
MATR3-218	ENST00000511978	SOSTDC1	Q6X4U4	206 aa		2.98	□□□□□ -1.93
MATR3-218	ENST00000511978	ARL17A	Q8IVW1	177 aa		2.98	□□□□□ -1.93
MATR3-218	ENST00000511978	SPANXB1	Q9NS25	103 aa	Predicted RBP	2.98	□□□□□ -1.93
MATR3-218	ENST00000511978	TRBV10-3	A0A0K0K1G6	114 aa		2.97	□□□□□ -1.93
MATR3-218	ENST00000511978	TRBV10-2	A0A0K0K1G8	114 aa		2.97	□□□□□ -1.93
MATR3-218	ENST00000511978	TIMM17B	O60830	172 aa		2.97	□□□□□ -1.93

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