RNA–Protein interactions for RNA: ENST00000510335.5

PTPN20-224, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,153 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-224ENST00000510335 DEFB4AO15263 64 aa5.48□□□□□ -1.53
PTPN20-224ENST00000510335 HIGD2BQ4VC39 106 aa5.48□□□□□ -1.53
PTPN20-224ENST00000510335 FP248Q71RG6 208 aaPredicted RBP5.48□□□□□ -1.53
PTPN20-224ENST00000510335 SNURFQ9Y675 71 aa5.48□□□□□ -1.53
PTPN20-224ENST00000510335 JMJD1CQ15652 2540 aa5.48□□□□□ -1.53
PTPN20-224ENST00000510335 FAM208BQ5VWN6 2430 aa5.48□□□□□ -1.53
PTPN20-224ENST00000510335 MAP1AP78559 2803 aaPredicted RBP5.47□□□□□ -1.53
PTPN20-224ENST00000510335 USP24Q9UPU5 2620 aa5.47□□□□□ -1.53
PTPN20-224ENST00000510335 KRTAP4-16G5E9R7 235 aaPredicted RBP5.47□□□□□ -1.53
PTPN20-224ENST00000510335 Q6ZRP5 223 aa5.47□□□□□ -1.53
PTPN20-224ENST00000510335 WFDC10BQ8IUB3 73 aa5.47□□□□□ -1.53
PTPN20-224ENST00000510335 SPRR4Q96PI1 79 aa5.47□□□□□ -1.53
PTPN20-224ENST00000510335 CSMD2Q7Z408 3487 aa5.47□□□□□ -1.53
PTPN20-224ENST00000510335 WNK1Q9H4A3 2382 aa5.47□□□□□ -1.53
PTPN20-224ENST00000510335 FUSP35637 526 aaKnown RBP eCLIP5.46□□□□□ -1.54
PTPN20-224ENST00000510335 SYCNQ0VAF6 134 aa5.46□□□□□ -1.54
PTPN20-224ENST00000510335 KPRPQ5T749 579 aaPredicted RBP5.46□□□□□ -1.54
PTPN20-224ENST00000510335 Q6ZRX8 168 aa5.46□□□□□ -1.54
PTPN20-224ENST00000510335 Q8N377 158 aa5.46□□□□□ -1.54
PTPN20-224ENST00000510335 NBPF19A0A087WUL8 3843 aa5.46□□□□□ -1.54
PTPN20-224ENST00000510335 HTN3P15516 51 aa5.45□□□□□ -1.54
PTPN20-224ENST00000510335 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
PTPN20-224ENST00000510335 SCXQ7RTU7 201 aa5.45□□□□□ -1.54
PTPN20-224ENST00000510335 NKAPP1Q8N9T2 125 aa5.45□□□□□ -1.54
PTPN20-224ENST00000510335 Q8NBF4 154 aa5.45□□□□□ -1.54
PTPN20-224ENST00000510335 C7orf33Q8WU49 177 aa5.45□□□□□ -1.54
PTPN20-224ENST00000510335 ABCA12Q86UK0 2595 aa5.45□□□□□ -1.54
PTPN20-224ENST00000510335 DNAH10OSP0CZ25 163 aa5.44□□□□□ -1.54
PTPN20-224ENST00000510335 KRTAP9-9Q9BYP9 154 aa5.44□□□□□ -1.54
PTPN20-224ENST00000510335 KRTAP9-4Q9BYQ2 154 aa5.44□□□□□ -1.54
PTPN20-224ENST00000510335 APCP25054 2843 aa5.44□□□□□ -1.54
PTPN20-224ENST00000510335 FLNAP21333 2647 aaKnown RBP5.43□□□□□ -1.54
PTPN20-224ENST00000510335 KRTAP9-7A8MTY7 169 aa5.43□□□□□ -1.54
PTPN20-224ENST00000510335 ESRGQ1W209 222 aa5.43□□□□□ -1.54
PTPN20-224ENST00000510335 ZCCHC13Q8WW36 166 aaKnown RBP5.43□□□□□ -1.54
PTPN20-224ENST00000510335 ZNF469Q96JG9 3925 aaPredicted RBP5.42□□□□□ -1.54
PTPN20-224ENST00000510335 IGLV1-50A0A075B6I6 118 aa5.42□□□□□ -1.54
PTPN20-224ENST00000510335 A0A1W2PNM2 257 aa5.42□□□□□ -1.54
PTPN20-224ENST00000510335 Q6ZTC4 211 aa5.42□□□□□ -1.54
PTPN20-224ENST00000510335 SONP18583 2426 aaKnown RBP5.41□□□□□ -1.54
PTPN20-224ENST00000510335 C1orf137Q5JT78 98 aa5.41□□□□□ -1.54
PTPN20-224ENST00000510335 SERTAD4-AS1Q5TG53 156 aa5.41□□□□□ -1.54
PTPN20-224ENST00000510335 LINC00336Q6ZUF6 198 aa5.41□□□□□ -1.54
PTPN20-224ENST00000510335 IGLV8-61A0A075B6I0 122 aa5.4□□□□□ -1.54
PTPN20-224ENST00000510335 Q9BRP9 147 aa5.4□□□□□ -1.54
PTPN20-224ENST00000510335 CYP4F30PQ9H0H9 118 aa5.4□□□□□ -1.54
PTPN20-224ENST00000510335 CENPEQ02224 2701 aa5.39□□□□□ -1.55
PTPN20-224ENST00000510335 ETDCA0A1B0GVM5 59 aa5.39□□□□□ -1.55
PTPN20-224ENST00000510335 C3orf84H3BNL1 204 aa5.39□□□□□ -1.55
PTPN20-224ENST00000510335 J3QKU1 62 aa5.39□□□□□ -1.55
PTPN20-224ENST00000510335 SMIM29Q86T20 159 aa5.39□□□□□ -1.55
PTPN20-224ENST00000510335 Q8N9L7 120 aa5.39□□□□□ -1.55
PTPN20-224ENST00000510335 PDZD2O15018 2839 aa5.39□□□□□ -1.55
PTPN20-224ENST00000510335 IGKV2D-24A0A075B6R9 120 aa5.38□□□□□ -1.55
PTPN20-224ENST00000510335 hDV103S1A0JD37 113 aa5.38□□□□□ -1.55
PTPN20-224ENST00000510335 RPL37AP8A6NKH3 93 aa5.38□□□□□ -1.55
PTPN20-224ENST00000510335 DSCR10P59022 87 aa5.38□□□□□ -1.55
PTPN20-224ENST00000510335 KRTAP10-2P60368 255 aa5.38□□□□□ -1.55
PTPN20-224ENST00000510335 DEFB131BA0A096LNP1 70 aa5.36□□□□□ -1.55
PTPN20-224ENST00000510335 NDUFB1O75438 58 aa5.36□□□□□ -1.55
PTPN20-224ENST00000510335 Q1T7F1 81 aa5.36□□□□□ -1.55
PTPN20-224ENST00000510335 MRPL55Q7Z7F7 128 aaKnown RBP5.36□□□□□ -1.55
PTPN20-224ENST00000510335 SMR3AQ99954 134 aa5.36□□□□□ -1.55
PTPN20-224ENST00000510335 HIGD2AQ9BW72 106 aa5.36□□□□□ -1.55
PTPN20-224ENST00000510335 LINC00474Q9P2X8 69 aa5.36□□□□□ -1.55
PTPN20-224ENST00000510335 FN1P02751 2386 aaKnown RBP5.35□□□□□ -1.55
PTPN20-224ENST00000510335 HCG22E2RYF7 251 aa5.35□□□□□ -1.55
PTPN20-224ENST00000510335 H3BPC8 53 aa5.35□□□□□ -1.55
PTPN20-224ENST00000510335 ZFYVE26Q68DK2 2539 aa5.35□□□□□ -1.55
PTPN20-224ENST00000510335 CCDC168Q8NDH2 2452 aa5.34□□□□□ -1.55
PTPN20-224ENST00000510335 INAFM1C9JVW0 142 aa5.34□□□□□ -1.55
PTPN20-224ENST00000510335 FAM229BQ4G0N7 80 aa5.34□□□□□ -1.55
PTPN20-224ENST00000510335 KRTAP7-1Q8IUC3 87 aa5.34□□□□□ -1.55
PTPN20-224ENST00000510335 GCN1Q92616 2671 aaKnown RBP5.33□□□□□ -1.56
PTPN20-224ENST00000510335 K7EQZ3 153 aa5.33□□□□□ -1.56
PTPN20-224ENST00000510335 REG3GQ6UW15 175 aa5.33□□□□□ -1.56
PTPN20-224ENST00000510335 DEFB105AQ8NG35 78 aa5.33□□□□□ -1.56
PTPN20-224ENST00000510335 RETNQ9HD89 108 aa5.33□□□□□ -1.56
PTPN20-224ENST00000510335 LINC00588Q9Y4M8 146 aa5.33□□□□□ -1.56
PTPN20-224ENST00000510335 CUBNO60494 3623 aa5.33□□□□□ -1.56
PTPN20-224ENST00000510335 HIVEP2P31629 2446 aa5.32□□□□□ -1.56
PTPN20-224ENST00000510335 SPRR1BP22528 89 aa5.32□□□□□ -1.56
PTPN20-224ENST00000510335 KRTAP10-11P60412 298 aa5.32□□□□□ -1.56
PTPN20-224ENST00000510335 SPANXA2-OT1Q8N9U9 137 aa5.32□□□□□ -1.56
PTPN20-224ENST00000510335 ST20-AS1Q8NBB2 130 aa5.32□□□□□ -1.56
PTPN20-224ENST00000510335 C11orf45Q8TAV5 145 aa5.32□□□□□ -1.56
PTPN20-224ENST00000510335 LINC00476Q8WZB0 136 aa5.32□□□□□ -1.56
PTPN20-224ENST00000510335 NIPBLQ6KC79 2804 aaeCLIP5.32□□□□□ -1.56
PTPN20-224ENST00000510335 NF1P21359 2839 aa5.31□□□□□ -1.56
PTPN20-224ENST00000510335 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.31□□□□□ -1.56
PTPN20-224ENST00000510335 H0Y9J4 135 aa5.31□□□□□ -1.56
PTPN20-224ENST00000510335 MTORP42345 2549 aa5.3□□□□□ -1.56
PTPN20-224ENST00000510335 KRTAP29-1A8MX34 341 aaPredicted RBP5.3□□□□□ -1.56
PTPN20-224ENST00000510335 PSCAO43653 123 aa5.3□□□□□ -1.56
PTPN20-224ENST00000510335 CNBPP62633 177 aaKnown RBP5.3□□□□□ -1.56
PTPN20-224ENST00000510335 IGFL1Q6UW32 110 aa5.3□□□□□ -1.56
PTPN20-224ENST00000510335 PRR15Q8IV56 129 aa5.3□□□□□ -1.56
PTPN20-224ENST00000510335 C1orf64Q8NEQ6 169 aa5.3□□□□□ -1.56
PTPN20-224ENST00000510335 V9GYY9 64 aa5.3□□□□□ -1.56
PTPN20-224ENST00000510335 FAM168BA1KXE4 195 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms