RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 JOSD1Q15040 202 aaPredicted RBP5.81□□□□□ -1.48
DDX41-211ENST00000510171 GAGE2AQ6NT46 116 aa5.81□□□□□ -1.48
DDX41-211ENST00000510171 FSIP2Q5CZC0 6907 aa5.81□□□□□ -1.48
DDX41-211ENST00000510171 TRAV23DV6A0A075B6W5 121 aa5.8□□□□□ -1.48
DDX41-211ENST00000510171 SYS1-DBNDD2H3BUS1 97 aa5.8□□□□□ -1.48
DDX41-211ENST00000510171 HIST1H2BKO60814 126 aa5.8□□□□□ -1.48
DDX41-211ENST00000510171 HIST1H2BJP06899 126 aa5.8□□□□□ -1.48
DDX41-211ENST00000510171 HIST1H2BOP23527 126 aa5.8□□□□□ -1.48
DDX41-211ENST00000510171 HIST1H2BBP33778 126 aa5.8□□□□□ -1.48
DDX41-211ENST00000510171 HIST1H2BDP58876 126 aa5.8□□□□□ -1.48
DDX41-211ENST00000510171 HIST1H2BCP62807 126 aa5.8□□□□□ -1.48
DDX41-211ENST00000510171 HIST2H2BEQ16778 126 aa5.8□□□□□ -1.48
DDX41-211ENST00000510171 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.8□□□□□ -1.48
DDX41-211ENST00000510171 SSBP3-AS1Q7Z2R9 100 aa5.8□□□□□ -1.48
DDX41-211ENST00000510171 HIST1H2BHQ93079 126 aa5.8□□□□□ -1.48
DDX41-211ENST00000510171 HIST1H2BNQ99877 126 aa5.8□□□□□ -1.48
DDX41-211ENST00000510171 HIST1H2BMQ99879 126 aa5.8□□□□□ -1.48
DDX41-211ENST00000510171 Q9BRP9 147 aa5.8□□□□□ -1.48
DDX41-211ENST00000510171 SLC25A20O43772 301 aa5.79□□□□□ -1.48
DDX41-211ENST00000510171 RPS29P62273 56 aaKnown RBP5.79□□□□□ -1.48
DDX41-211ENST00000510171 MOBPQ13875 183 aa5.79□□□□□ -1.48
DDX41-211ENST00000510171 ADAMTSL4-AS1Q5T5F5 129 aa5.79□□□□□ -1.48
DDX41-211ENST00000510171 XP32Q5T750 250 aa5.79□□□□□ -1.48
DDX41-211ENST00000510171 Q8N377 158 aa5.79□□□□□ -1.48
DDX41-211ENST00000510171 IGLV9-49A0A0B4J1Y8 123 aa5.78□□□□□ -1.48
DDX41-211ENST00000510171 ZNF73O43830 326 aaPredicted RBP5.78□□□□□ -1.48
DDX41-211ENST00000510171 ERC2-IT1O76042 136 aa5.78□□□□□ -1.48
DDX41-211ENST00000510171 HINT1P49773 126 aaPredicted RBP5.78□□□□□ -1.48
DDX41-211ENST00000510171 NPC2P61916 151 aa5.78□□□□□ -1.48
DDX41-211ENST00000510171 LINC01545Q5VT33 79 aa5.78□□□□□ -1.48
DDX41-211ENST00000510171 PET117Q6UWS5 81 aa5.78□□□□□ -1.48
DDX41-211ENST00000510171 SOSTDC1Q6X4U4 206 aa5.78□□□□□ -1.48
DDX41-211ENST00000510171 C5orf52A6NGY3 159 aa5.77□□□□□ -1.49
DDX41-211ENST00000510171 TIMM17BO60830 172 aa5.77□□□□□ -1.49
DDX41-211ENST00000510171 LCE2CQ5TA81 110 aa5.77□□□□□ -1.49
DDX41-211ENST00000510171 SPANXCQ9NY87 97 aa5.77□□□□□ -1.49
DDX41-211ENST00000510171 EIF4EBP3O60516 100 aaPredicted RBP5.76□□□□□ -1.49
DDX41-211ENST00000510171 LINC00308Q8TCZ7 52 aa5.76□□□□□ -1.49
DDX41-211ENST00000510171 LITAFQ99732 161 aa5.75□□□□□ -1.49
DDX41-211ENST00000510171 ZNF815PA8K554 130 aa5.74□□□□□ -1.49
DDX41-211ENST00000510171 OR13C6PQ8NH95 151 aa5.74□□□□□ -1.49
DDX41-211ENST00000510171 SPANXDQ9BXN6 97 aa5.74□□□□□ -1.49
DDX41-211ENST00000510171 CFC1BP0CG36 223 aa5.73□□□□□ -1.49
DDX41-211ENST00000510171 COA6Q5JTJ3 125 aaKnown RBP5.73□□□□□ -1.49
DDX41-211ENST00000510171 C9orf153Q5TBE3 101 aa5.73□□□□□ -1.49
DDX41-211ENST00000510171 LINC00518Q8N0U6 118 aa5.73□□□□□ -1.49
DDX41-211ENST00000510171 DHRS4-AS1Q9P1J3 65 aa5.73□□□□□ -1.49
DDX41-211ENST00000510171 C3orf79P0CE67 100 aa5.72□□□□□ -1.49
DDX41-211ENST00000510171 MT1HP80294 61 aa5.72□□□□□ -1.49
DDX41-211ENST00000510171 KRTAP19-2Q3LHN2 52 aa5.72□□□□□ -1.49
DDX41-211ENST00000510171 SLC25A34Q6PIV7 304 aa5.72□□□□□ -1.49
DDX41-211ENST00000510171 COPS9Q8WXC6 57 aa5.72□□□□□ -1.49
DDX41-211ENST00000510171 C20orf202A1L168 122 aa5.71□□□□□ -1.5
DDX41-211ENST00000510171 AKR1D1P51857 326 aa5.71□□□□□ -1.5
DDX41-211ENST00000510171 KRTDAPP60985 99 aa5.71□□□□□ -1.5
DDX41-211ENST00000510171 ST20-AS1Q8NBB2 130 aa5.71□□□□□ -1.5
DDX41-211ENST00000510171 SPRR1BP22528 89 aa5.7□□□□□ -1.5
DDX41-211ENST00000510171 PCOTHQ58A44 107 aa5.7□□□□□ -1.5
DDX41-211ENST00000510171 SCGB1D4Q6XE38 83 aa5.7□□□□□ -1.5
DDX41-211ENST00000510171 IGLV8-61A0A075B6I0 122 aa5.69□□□□□ -1.5
DDX41-211ENST00000510171 ELOF1P60002 83 aaKnown RBP5.69□□□□□ -1.5
DDX41-211ENST00000510171 TTTY13Q9BZ97 58 aa5.69□□□□□ -1.5
DDX41-211ENST00000510171 TRBV7-6A0A0J9YX20 115 aa5.68□□□□□ -1.5
DDX41-211ENST00000510171 IFITM1P13164 125 aa5.68□□□□□ -1.5
DDX41-211ENST00000510171 COX7BP24311 80 aa5.68□□□□□ -1.5
DDX41-211ENST00000510171 C6orf99Q4VX62 202 aa5.68□□□□□ -1.5
DDX41-211ENST00000510171 Q6ZVH6 145 aa5.68□□□□□ -1.5
DDX41-211ENST00000510171 LAMTOR3Q9UHA4 124 aa5.68□□□□□ -1.5
DDX41-211ENST00000510171 LIMD2Q9BT23 127 aa5.67□□□□□ -1.5
DDX41-211ENST00000510171 A0A1B0GWB2 263 aa5.65□□□□□ -1.5
DDX41-211ENST00000510171 C9orf92A6NGG3 77 aa5.65□□□□□ -1.5
DDX41-211ENST00000510171 LORP23490 312 aaPredicted RBP5.65□□□□□ -1.5
DDX41-211ENST00000510171 KRTAP10-6P60371 365 aaPredicted RBP5.65□□□□□ -1.5
DDX41-211ENST00000510171 SNRPEP62304 92 aaKnown RBP5.65□□□□□ -1.5
DDX41-211ENST00000510171 TAL2Q16559 108 aa5.65□□□□□ -1.5
DDX41-211ENST00000510171 ANKRD39Q53RE8 183 aa5.65□□□□□ -1.5
DDX41-211ENST00000510171 TEX49A0A1B0GTD5 131 aa5.64□□□□□ -1.51
DDX41-211ENST00000510171 A6NDN8 102 aa5.64□□□□□ -1.51
DDX41-211ENST00000510171 HRCT1Q6UXD1 115 aa5.64□□□□□ -1.51
DDX41-211ENST00000510171 ATOH7Q8N100 152 aa5.64□□□□□ -1.51
DDX41-211ENST00000510171 A4D1N5 150 aa5.63□□□□□ -1.51
DDX41-211ENST00000510171 M0R2T5 61 aa5.63□□□□□ -1.51
DDX41-211ENST00000510171 CD164Q04900 197 aa5.63□□□□□ -1.51
DDX41-211ENST00000510171 DEFB105AQ8NG35 78 aa5.63□□□□□ -1.51
DDX41-211ENST00000510171 PRO1933Q9H354 126 aa5.63□□□□□ -1.51
DDX41-211ENST00000510171 TRAV13-2A0A0B4J235 113 aa5.62□□□□□ -1.51
DDX41-211ENST00000510171 Q1RN00 199 aa5.62□□□□□ -1.51
DDX41-211ENST00000510171 PCP2Q8IVA1 136 aa5.62□□□□□ -1.51
DDX41-211ENST00000510171 MUSTN1Q8IVN3 82 aa5.62□□□□□ -1.51
DDX41-211ENST00000510171 NHP2Q9NX24 153 aaKnown RBP5.62□□□□□ -1.51
DDX41-211ENST00000510171 IGLV5-48A0A075B6I7 105 aa5.61□□□□□ -1.51
DDX41-211ENST00000510171 H7C2G1 150 aa5.6□□□□□ -1.51
DDX41-211ENST00000510171 HSBP1L1C9JCN9 74 aa5.59□□□□□ -1.51
DDX41-211ENST00000510171 S100A2P29034 98 aa5.59□□□□□ -1.51
DDX41-211ENST00000510171 Q5XG85 94 aa5.59□□□□□ -1.51
DDX41-211ENST00000510171 COX6B2Q6YFQ2 88 aa5.58□□□□□ -1.52
DDX41-211ENST00000510171 SMIM29Q86T20 159 aa5.58□□□□□ -1.52
DDX41-211ENST00000510171 SMIM11BQ8TCY0 68 aa5.58□□□□□ -1.52
DDX41-211ENST00000510171 HIST1H2BLQ99880 126 aa5.58□□□□□ -1.52
DDX41-211ENST00000510171 VAMP3Q15836 100 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms