RNA–Protein interactions for RNA: ENST00000509625.1

PACRGL-222, Transcript of parkin coregulated like, human

TSL 4

Gene PACRGL, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACRGL-222	ENST00000509625	SSBP3-AS1	Q7Z2R9	100 aa		11.76	□□□□□ -0.53
PACRGL-222	ENST00000509625		Q8N377	158 aa		11.76	□□□□□ -0.53
PACRGL-222	ENST00000509625	COLCA2	A8K830	154 aa		11.75	□□□□□ -0.53
PACRGL-222	ENST00000509625	RPS29	P62273	56 aa	Known RBP	11.73	□□□□□ -0.53
PACRGL-222	ENST00000509625		E9PLD3	99 aa		11.72	□□□□□ -0.53
PACRGL-222	ENST00000509625	ZNF73	O43830	326 aa	Predicted RBP	11.72	□□□□□ -0.53
PACRGL-222	ENST00000509625	ASB16-AS1	Q495Z4	193 aa		11.72	□□□□□ -0.53
PACRGL-222	ENST00000509625	ST20-AS1	Q8NBB2	130 aa		11.71	□□□□□ -0.53
PACRGL-222	ENST00000509625	JOSD1	Q15040	202 aa	Predicted RBP	11.7	□□□□□ -0.54
PACRGL-222	ENST00000509625	C9orf153	Q5TBE3	101 aa		11.7	□□□□□ -0.54
PACRGL-222	ENST00000509625	KRTAP4-1	Q9BYQ7	146 aa		11.7	□□□□□ -0.54
PACRGL-222	ENST00000509625	S100A1	P23297	94 aa		11.69	□□□□□ -0.54
PACRGL-222	ENST00000509625	LITAF	Q99732	161 aa		11.68	□□□□□ -0.54
PACRGL-222	ENST00000509625	SLC25A20	O43772	301 aa		11.67	□□□□□ -0.54
PACRGL-222	ENST00000509625	SYS1-DBNDD2	H3BUS1	97 aa		11.66	□□□□□ -0.54
PACRGL-222	ENST00000509625	LINC00308	Q8TCZ7	52 aa		11.65	□□□□□ -0.54
PACRGL-222	ENST00000509625	SEC61B	P60468	96 aa	Known RBP	11.63	□□□□□ -0.55
PACRGL-222	ENST00000509625	SPANXC	Q9NY87	97 aa		11.63	□□□□□ -0.55
PACRGL-222	ENST00000509625	HIST1H2BK	O60814	126 aa		11.62	□□□□□ -0.55
PACRGL-222	ENST00000509625	HIST1H2BJ	P06899	126 aa		11.62	□□□□□ -0.55
PACRGL-222	ENST00000509625	HIST1H2BO	P23527	126 aa		11.62	□□□□□ -0.55
PACRGL-222	ENST00000509625	HIST1H2BB	P33778	126 aa		11.62	□□□□□ -0.55
PACRGL-222	ENST00000509625	HIST1H2BD	P58876	126 aa		11.62	□□□□□ -0.55
PACRGL-222	ENST00000509625	HIST1H2BC	P62807	126 aa		11.62	□□□□□ -0.55
PACRGL-222	ENST00000509625	HIST2H2BE	Q16778	126 aa		11.62	□□□□□ -0.55
PACRGL-222	ENST00000509625	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.62	□□□□□ -0.55
PACRGL-222	ENST00000509625	HIST1H2BH	Q93079	126 aa		11.62	□□□□□ -0.55
PACRGL-222	ENST00000509625	HIST1H2BN	Q99877	126 aa		11.62	□□□□□ -0.55
PACRGL-222	ENST00000509625	HIST1H2BM	Q99879	126 aa		11.62	□□□□□ -0.55
PACRGL-222	ENST00000509625	LINC01545	Q5VT33	79 aa		11.61	□□□□□ -0.55
PACRGL-222	ENST00000509625	OR13C6P	Q8NH95	151 aa		11.61	□□□□□ -0.55
PACRGL-222	ENST00000509625	C5orf52	A6NGY3	159 aa		11.6	□□□□□ -0.55
PACRGL-222	ENST00000509625	TIMM17B	O60830	172 aa		11.6	□□□□□ -0.55
PACRGL-222	ENST00000509625	HINT1	P49773	126 aa	Predicted RBP	11.6	□□□□□ -0.55
PACRGL-222	ENST00000509625	TTTY13	Q9BZ97	58 aa		11.6	□□□□□ -0.55
PACRGL-222	ENST00000509625	CBY1	Q9Y3M2	126 aa		11.6	□□□□□ -0.55
PACRGL-222	ENST00000509625	XP32	Q5T750	250 aa		11.59	□□□□□ -0.55
PACRGL-222	ENST00000509625	ZNF815P	A8K554	130 aa		11.58	□□□□□ -0.56
PACRGL-222	ENST00000509625	SPRR1B	P22528	89 aa		11.58	□□□□□ -0.56
PACRGL-222	ENST00000509625	PET117	Q6UWS5	81 aa		11.56	□□□□□ -0.56
PACRGL-222	ENST00000509625	SPANXD	Q9BXN6	97 aa		11.56	□□□□□ -0.56
PACRGL-222	ENST00000509625	HRCT1	Q6UXD1	115 aa		11.55	□□□□□ -0.56
PACRGL-222	ENST00000509625	DHRS4-AS1	Q9P1J3	65 aa		11.55	□□□□□ -0.56
PACRGL-222	ENST00000509625	C3orf79	P0CE67	100 aa		11.53	□□□□□ -0.56
PACRGL-222	ENST00000509625	ELOF1	P60002	83 aa	Known RBP	11.53	□□□□□ -0.56
PACRGL-222	ENST00000509625	COX7B	P24311	80 aa		11.52	□□□□□ -0.57
PACRGL-222	ENST00000509625	LINC01547	P58512	204 aa	Predicted RBP	11.52	□□□□□ -0.57
PACRGL-222	ENST00000509625	C6orf99	Q4VX62	202 aa		11.52	□□□□□ -0.57
PACRGL-222	ENST00000509625	SLC25A34	Q6PIV7	304 aa		11.51	□□□□□ -0.57
PACRGL-222	ENST00000509625	LAMTOR3	Q9UHA4	124 aa		11.5	□□□□□ -0.57
PACRGL-222	ENST00000509625	LINC00518	Q8N0U6	118 aa		11.49	□□□□□ -0.57
PACRGL-222	ENST00000509625	LIMD2	Q9BT23	127 aa		11.49	□□□□□ -0.57
PACRGL-222	ENST00000509625	KRTAP9-6	A0A140TA67	174 aa		11.47	□□□□□ -0.57
PACRGL-222	ENST00000509625		Q1RN00	199 aa		11.47	□□□□□ -0.57
PACRGL-222	ENST00000509625	DEFB105A	Q8NG35	78 aa		11.47	□□□□□ -0.57
PACRGL-222	ENST00000509625	KRTDAP	P60985	99 aa		11.46	□□□□□ -0.57
PACRGL-222	ENST00000509625	TAL2	Q16559	108 aa		11.45	□□□□□ -0.58
PACRGL-222	ENST00000509625	C9orf92	A6NGG3	77 aa		11.44	□□□□□ -0.58
PACRGL-222	ENST00000509625	ANKRD39	Q53RE8	183 aa		11.44	□□□□□ -0.58
PACRGL-222	ENST00000509625	SCGB1D4	Q6XE38	83 aa		11.44	□□□□□ -0.58
PACRGL-222	ENST00000509625	COA6	Q5JTJ3	125 aa	Known RBP	11.43	□□□□□ -0.58
PACRGL-222	ENST00000509625	LCE2C	Q5TA81	110 aa		11.42	□□□□□ -0.58
PACRGL-222	ENST00000509625	TRBV7-6	A0A0J9YX20	115 aa		11.41	□□□□□ -0.58
PACRGL-222	ENST00000509625	TEX49	A0A1B0GTD5	131 aa		11.41	□□□□□ -0.58
PACRGL-222	ENST00000509625	SMIM29	Q86T20	159 aa		11.41	□□□□□ -0.58
PACRGL-222	ENST00000509625		H7C2G1	150 aa		11.4	□□□□□ -0.58
PACRGL-222	ENST00000509625	CD164	Q04900	197 aa		11.4	□□□□□ -0.58
PACRGL-222	ENST00000509625	PCOTH	Q58A44	107 aa		11.4	□□□□□ -0.58
PACRGL-222	ENST00000509625	ATOH7	Q8N100	152 aa		11.4	□□□□□ -0.58
PACRGL-222	ENST00000509625	PRO1933	Q9H354	126 aa		11.4	□□□□□ -0.58
PACRGL-222	ENST00000509625	KRTAP19-2	Q3LHN2	52 aa		11.39	□□□□□ -0.59
PACRGL-222	ENST00000509625		A0A1B0GWB2	263 aa		11.38	□□□□□ -0.59
PACRGL-222	ENST00000509625		A6NDN8	102 aa		11.38	□□□□□ -0.59
PACRGL-222	ENST00000509625	IFITM1	P13164	125 aa		11.38	□□□□□ -0.59
PACRGL-222	ENST00000509625		A0A0G2JQZ4	141 aa		11.37	□□□□□ -0.59
PACRGL-222	ENST00000509625	PCP2	Q8IVA1	136 aa		11.37	□□□□□ -0.59
PACRGL-222	ENST00000509625	MUSTN1	Q8IVN3	82 aa		11.37	□□□□□ -0.59
PACRGL-222	ENST00000509625	IGLV5-48	A0A075B6I7	105 aa		11.36	□□□□□ -0.59
PACRGL-222	ENST00000509625	C20orf202	A1L168	122 aa		11.36	□□□□□ -0.59
PACRGL-222	ENST00000509625	COPS9	Q8WXC6	57 aa		11.36	□□□□□ -0.59
PACRGL-222	ENST00000509625	IGLV8-61	A0A075B6I0	122 aa		11.34	□□□□□ -0.59
PACRGL-222	ENST00000509625		Q6ZVH6	145 aa		11.34	□□□□□ -0.59
PACRGL-222	ENST00000509625	AKR1D1	P51857	326 aa		11.33	□□□□□ -0.6
PACRGL-222	ENST00000509625	S100A6	P06703	90 aa		11.32	□□□□□ -0.6
PACRGL-222	ENST00000509625	LCE2D	Q5TA82	110 aa	Predicted RBP	11.32	□□□□□ -0.6
PACRGL-222	ENST00000509625		Q5XG85	94 aa		11.32	□□□□□ -0.6
PACRGL-222	ENST00000509625	C1orf195	Q5TG92	126 aa		11.31	□□□□□ -0.6
PACRGL-222	ENST00000509625	SMIM11B	Q8TCY0	68 aa		11.3	□□□□□ -0.6
PACRGL-222	ENST00000509625	S100A2	P29034	98 aa		11.29	□□□□□ -0.6
PACRGL-222	ENST00000509625	TRAV13-2	A0A0B4J235	113 aa		11.28	□□□□□ -0.6
PACRGL-222	ENST00000509625		A4D1N5	150 aa		11.28	□□□□□ -0.6
PACRGL-222	ENST00000509625	MT1H	P80294	61 aa		11.27	□□□□□ -0.61
PACRGL-222	ENST00000509625	NHP2	Q9NX24	153 aa	Known RBP	11.25	□□□□□ -0.61
PACRGL-222	ENST00000509625	HIST3H2BB	Q8N257	126 aa		11.24	□□□□□ -0.61
PACRGL-222	ENST00000509625	FLG	P20930	4061 aa	Predicted RBP	11.24	□□□□□ -0.61
PACRGL-222	ENST00000509625	HIST1H2BL	Q99880	126 aa		11.21	□□□□□ -0.61
PACRGL-222	ENST00000509625	RPL37	P61927	97 aa	Known RBP	11.2	□□□□□ -0.62
PACRGL-222	ENST00000509625	SNRPE	P62304	92 aa	Known RBP	11.19	□□□□□ -0.62
PACRGL-222	ENST00000509625	LINC00575	Q6W349	94 aa		11.18	□□□□□ -0.62
PACRGL-222	ENST00000509625	FSIP2	Q5CZC0	6907 aa		11.17	□□□□□ -0.62

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