RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 OBSCN-AS1Q96MR7 158 aa9.53□□□□□ -0.88
PHF3-209ENST00000509330 VPS13DQ5THJ4 4388 aa9.53□□□□□ -0.88
PHF3-209ENST00000509330 MRPL55Q7Z7F7 128 aaKnown RBP9.53□□□□□ -0.88
PHF3-209ENST00000509330 LINC00846Q9NV44 126 aa9.52□□□□□ -0.88
PHF3-209ENST00000509330 A0A1W2PNN7 141 aa9.52□□□□□ -0.89
PHF3-209ENST00000509330 KCNQ1DNQ9H478 68 aa9.51□□□□□ -0.89
PHF3-209ENST00000509330 DNAH2Q9P225 4427 aa9.51□□□□□ -0.89
PHF3-209ENST00000509330 IGLV1-50A0A075B6I6 118 aa9.5□□□□□ -0.89
PHF3-209ENST00000509330 JMJD7-PLA2G4BH0Y9G9 81 aa9.5□□□□□ -0.89
PHF3-209ENST00000509330 ACYP1P07311 99 aa9.5□□□□□ -0.89
PHF3-209ENST00000509330 RBM3P98179 157 aaKnown RBP9.5□□□□□ -0.89
PHF3-209ENST00000509330 ETDCA0A1B0GVM5 59 aa9.49□□□□□ -0.89
PHF3-209ENST00000509330 C3orf22Q8N5N4 141 aa9.49□□□□□ -0.89
PHF3-209ENST00000509330 LRCOL1A6NCL2 159 aa9.48□□□□□ -0.89
PHF3-209ENST00000509330 IGKV3D-7A0A0C4DH55 119 aa9.48□□□□□ -0.89
PHF3-209ENST00000509330 CNBPP62633 177 aaKnown RBP9.48□□□□□ -0.89
PHF3-209ENST00000509330 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.48□□□□□ -0.89
PHF3-209ENST00000509330 DPH3Q96FX2 82 aa9.48□□□□□ -0.89
PHF3-209ENST00000509330 SRRM2Q9UQ35 2752 aaKnown RBP9.47□□□□□ -0.89
PHF3-209ENST00000509330 C16orf90A8MZG2 172 aa9.47□□□□□ -0.89
PHF3-209ENST00000509330 CCKP06307 115 aa9.47□□□□□ -0.89
PHF3-209ENST00000509330 Q6ZRN7 208 aaPredicted RBP9.47□□□□□ -0.89
PHF3-209ENST00000509330 ST20-AS1Q8NBB2 130 aa9.47□□□□□ -0.89
PHF3-209ENST00000509330 Q9BRP9 147 aa9.47□□□□□ -0.89
PHF3-209ENST00000509330 PLA2G2DQ9UNK4 145 aa9.47□□□□□ -0.89
PHF3-209ENST00000509330 UBE2BP63146 152 aa9.46□□□□□ -0.9
PHF3-209ENST00000509330 SDIM1Q6ZPB5 146 aa9.46□□□□□ -0.9
PHF3-209ENST00000509330 PHF5AQ7RTV0 110 aaKnown RBP9.46□□□□□ -0.9
PHF3-209ENST00000509330 TRBV7-6A0A0J9YX20 115 aa9.45□□□□□ -0.9
PHF3-209ENST00000509330 PANO1I0J062 215 aa9.45□□□□□ -0.9
PHF3-209ENST00000509330 LY6G6CO95867 125 aa9.45□□□□□ -0.9
PHF3-209ENST00000509330 SCGB1A1P11684 91 aa9.45□□□□□ -0.9
PHF3-209ENST00000509330 PRLHP81277 87 aa9.45□□□□□ -0.9
PHF3-209ENST00000509330 DSCR8Q96T75 97 aa9.45□□□□□ -0.9
PHF3-209ENST00000509330 ERC2-IT1O76042 136 aa9.45□□□□□ -0.9
PHF3-209ENST00000509330 C14orf177Q52M58 125 aa9.45□□□□□ -0.9
PHF3-209ENST00000509330 Q6ZRX8 168 aa9.45□□□□□ -0.9
PHF3-209ENST00000509330 B5MCH6 92 aa9.44□□□□□ -0.9
PHF3-209ENST00000509330 IGLV5-37A0A075B6J1 123 aa9.44□□□□□ -0.9
PHF3-209ENST00000509330 NDUFV3P56181 108 aaKnown RBP9.44□□□□□ -0.9
PHF3-209ENST00000509330 LINC00643Q86TS7 51 aa9.44□□□□□ -0.9
PHF3-209ENST00000509330 PRYO14603 147 aa9.43□□□□□ -0.9
PHF3-209ENST00000509330 KRTAP11-1Q8IUC1 163 aa9.43□□□□□ -0.9
PHF3-209ENST00000509330 REG3GQ6UW15 175 aa9.42□□□□□ -0.9
PHF3-209ENST00000509330 Q6ZQT0 140 aa9.42□□□□□ -0.9
PHF3-209ENST00000509330 KRTAP4-16G5E9R7 235 aaPredicted RBP9.42□□□□□ -0.9
PHF3-209ENST00000509330 C9orf163Q8N9P6 203 aa9.41□□□□□ -0.9
PHF3-209ENST00000509330 FAM19A1Q7Z5A9 133 aa9.41□□□□□ -0.9
PHF3-209ENST00000509330 Q8N377 158 aa9.4□□□□□ -0.9
PHF3-209ENST00000509330 HIGD2AQ9BW72 106 aa9.4□□□□□ -0.9
PHF3-209ENST00000509330 SPRR1AP35321 89 aa9.39□□□□□ -0.91
PHF3-209ENST00000509330 ANAPC13Q9BS18 74 aa9.39□□□□□ -0.91
PHF3-209ENST00000509330 A0A087WVE0 104 aa9.39□□□□□ -0.91
PHF3-209ENST00000509330 A0A087WTM6 91 aa9.38□□□□□ -0.91
PHF3-209ENST00000509330 FAM236AA0A1B0GUQ0 79 aa9.38□□□□□ -0.91
PHF3-209ENST00000509330 FAM236BA0A1B0GV22 79 aa9.38□□□□□ -0.91
PHF3-209ENST00000509330 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.37□□□□□ -0.91
PHF3-209ENST00000509330 TRBV7-7A0A0K0K1E9 115 aa9.37□□□□□ -0.91
PHF3-209ENST00000509330 DHRS4-AS1Q9P1J3 65 aa9.37□□□□□ -0.91
PHF3-209ENST00000509330 HECTD4Q9Y4D8 3996 aa9.37□□□□□ -0.91
PHF3-209ENST00000509330 LINC01547P58512 204 aaPredicted RBP9.36□□□□□ -0.91
PHF3-209ENST00000509330 HIST1H4AP62805 103 aaKnown RBP9.36□□□□□ -0.91
PHF3-209ENST00000509330 LOC110117498A0A087WWA1 95 aa9.35□□□□□ -0.91
PHF3-209ENST00000509330 A0A0G2JQZ4 141 aa9.35□□□□□ -0.91
PHF3-209ENST00000509330 TRBV7-4A0A0J9YYF1 115 aa9.34□□□□□ -0.91
PHF3-209ENST00000509330 C3orf84H3BNL1 204 aa9.34□□□□□ -0.91
PHF3-209ENST00000509330 GHRHP01286 108 aa9.34□□□□□ -0.91
PHF3-209ENST00000509330 Q6ZR54 194 aa9.34□□□□□ -0.91
PHF3-209ENST00000509330 UBL5Q9BZL1 73 aa9.34□□□□□ -0.91
PHF3-209ENST00000509330 HYDINQ4G0P3 5121 aa9.34□□□□□ -0.91
PHF3-209ENST00000509330 HAMPP81172 84 aa9.33□□□□□ -0.92
PHF3-209ENST00000509330 Q6Q795 121 aa9.33□□□□□ -0.92
PHF3-209ENST00000509330 SCXQ7RTU7 201 aa9.33□□□□□ -0.92
PHF3-209ENST00000509330 RTL8CO15255 209 aa9.33□□□□□ -0.92
PHF3-209ENST00000509330 C1orf134Q5TEV5 83 aa9.32□□□□□ -0.92
PHF3-209ENST00000509330 H3BQ85 93 aa9.31□□□□□ -0.92
PHF3-209ENST00000509330 Q6JHZ5 121 aa9.3□□□□□ -0.92
PHF3-209ENST00000509330 Q6ZVQ6 151 aa9.3□□□□□ -0.92
PHF3-209ENST00000509330 DNAH6Q9C0G6 4158 aa9.29□□□□□ -0.92
PHF3-209ENST00000509330 FRAS1Q86XX4 4008 aa9.29□□□□□ -0.92
PHF3-209ENST00000509330 EPM2AB3EWF7 344 aa9.29□□□□□ -0.92
PHF3-209ENST00000509330 TNP2Q05952 138 aa9.29□□□□□ -0.92
PHF3-209ENST00000509330 DNAH17Q9UFH2 4485 aa9.28□□□□□ -0.92
PHF3-209ENST00000509330 UBE2AP49459 152 aa9.28□□□□□ -0.92
PHF3-209ENST00000509330 LINC00476Q8WZB0 136 aa9.27□□□□□ -0.92
PHF3-209ENST00000509330 WWC2-AS2Q96NR7 200 aa9.27□□□□□ -0.92
PHF3-209ENST00000509330 IGLV5-52A0A0A0MRZ9 124 aa9.27□□□□□ -0.93
PHF3-209ENST00000509330 PDE6GP18545 87 aa9.27□□□□□ -0.93
PHF3-209ENST00000509330 SPACA4Q8TDM5 124 aa9.27□□□□□ -0.93
PHF3-209ENST00000509330 IMUPQ9GZP8 106 aa9.27□□□□□ -0.93
PHF3-209ENST00000509330 C1orf137Q5JT78 98 aa9.26□□□□□ -0.93
PHF3-209ENST00000509330 CCDC179H3BU77 68 aa9.25□□□□□ -0.93
PHF3-209ENST00000509330 LINC00474Q9P2X8 69 aa9.25□□□□□ -0.93
PHF3-209ENST00000509330 IGLV5-48A0A075B6I7 105 aa9.25□□□□□ -0.93
PHF3-209ENST00000509330 DNAH8Q96JB1 4490 aa9.24□□□□□ -0.93
PHF3-209ENST00000509330 SMIM29Q86T20 159 aa9.23□□□□□ -0.93
PHF3-209ENST00000509330 Q8N9L7 120 aa9.23□□□□□ -0.93
PHF3-209ENST00000509330 A0A1W2PNM2 257 aa9.22□□□□□ -0.93
PHF3-209ENST00000509330 DNAH11Q96DT5 4516 aa9.22□□□□□ -0.93
PHF3-209ENST00000509330 KRTAP21-3Q3LHN1 58 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms