RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 GAGE2AQ6NT46 116 aa5.8□□□□□ -1.48
UBE2D3-227ENST00000508818 Q8NBF4 154 aa5.8□□□□□ -1.48
UBE2D3-227ENST00000508818 PMCHL2Q9BQD1 86 aa5.8□□□□□ -1.48
UBE2D3-227ENST00000508818 KRTAP4-2Q9BYR5 136 aa5.8□□□□□ -1.48
UBE2D3-227ENST00000508818 TRBV10-2A0A0K0K1G8 114 aa5.79□□□□□ -1.48
UBE2D3-227ENST00000508818 SPANXB1Q9NS25 103 aaPredicted RBP5.79□□□□□ -1.48
UBE2D3-227ENST00000508818 LOC107984156A0A0G2JMH3 177 aa5.78□□□□□ -1.48
UBE2D3-227ENST00000508818 B5MCH6 92 aa5.78□□□□□ -1.48
UBE2D3-227ENST00000508818 KRTAP4-16G5E9R7 235 aaPredicted RBP5.78□□□□□ -1.48
UBE2D3-227ENST00000508818 ARL17AQ8IVW1 177 aa5.78□□□□□ -1.48
UBE2D3-227ENST00000508818 IGLV9-49A0A0B4J1Y8 123 aa5.77□□□□□ -1.49
UBE2D3-227ENST00000508818 SPINK1P00995 79 aa5.77□□□□□ -1.49
UBE2D3-227ENST00000508818 JOSD1Q15040 202 aaPredicted RBP5.77□□□□□ -1.49
UBE2D3-227ENST00000508818 FP248Q71RG6 208 aaPredicted RBP5.77□□□□□ -1.49
UBE2D3-227ENST00000508818 SLC7A5P1Q8MH63 180 aa5.77□□□□□ -1.49
UBE2D3-227ENST00000508818 COLCA2A8K830 154 aa5.76□□□□□ -1.49
UBE2D3-227ENST00000508818 NDUFC2O95298 119 aa5.76□□□□□ -1.49
UBE2D3-227ENST00000508818 HINT1P49773 126 aaPredicted RBP5.76□□□□□ -1.49
UBE2D3-227ENST00000508818 NPC2P61916 151 aa5.76□□□□□ -1.49
UBE2D3-227ENST00000508818 LINC00483Q53H64 154 aa5.76□□□□□ -1.49
UBE2D3-227ENST00000508818 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
UBE2D3-227ENST00000508818 CBY1Q9Y3M2 126 aa5.76□□□□□ -1.49
UBE2D3-227ENST00000508818 TRAV23DV6A0A075B6W5 121 aa5.75□□□□□ -1.49
UBE2D3-227ENST00000508818 ERC2-IT1O76042 136 aa5.75□□□□□ -1.49
UBE2D3-227ENST00000508818 MOBPQ13875 183 aa5.75□□□□□ -1.49
UBE2D3-227ENST00000508818 Q6ZRX8 168 aa5.75□□□□□ -1.49
UBE2D3-227ENST00000508818 SSBP3-AS1Q7Z2R9 100 aa5.75□□□□□ -1.49
UBE2D3-227ENST00000508818 MUC2Q02817 5179 aa5.74□□□□□ -1.49
UBE2D3-227ENST00000508818 A0A0J9YXY3 114 aa5.74□□□□□ -1.49
UBE2D3-227ENST00000508818 IGLV6-57P01721 117 aa5.74□□□□□ -1.49
UBE2D3-227ENST00000508818 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
UBE2D3-227ENST00000508818 E9PLD3 99 aa5.73□□□□□ -1.49
UBE2D3-227ENST00000508818 ZNF73O43830 326 aaPredicted RBP5.73□□□□□ -1.49
UBE2D3-227ENST00000508818 ADAMTSL4-AS1Q5T5F5 129 aa5.73□□□□□ -1.49
UBE2D3-227ENST00000508818 C9orf153Q5TBE3 101 aa5.73□□□□□ -1.49
UBE2D3-227ENST00000508818 OR13C6PQ8NH95 151 aa5.73□□□□□ -1.49
UBE2D3-227ENST00000508818 Q9BRP9 147 aa5.73□□□□□ -1.49
UBE2D3-227ENST00000508818 SYS1-DBNDD2H3BUS1 97 aa5.72□□□□□ -1.49
UBE2D3-227ENST00000508818 SLC25A20O43772 301 aa5.71□□□□□ -1.5
UBE2D3-227ENST00000508818 SOSTDC1Q6X4U4 206 aa5.71□□□□□ -1.5
UBE2D3-227ENST00000508818 RPS29P62273 56 aaKnown RBP5.7□□□□□ -1.5
UBE2D3-227ENST00000508818 PET117Q6UWS5 81 aa5.7□□□□□ -1.5
UBE2D3-227ENST00000508818 LINC00308Q8TCZ7 52 aa5.7□□□□□ -1.5
UBE2D3-227ENST00000508818 SPANXCQ9NY87 97 aa5.7□□□□□ -1.5
UBE2D3-227ENST00000508818 C5orf52A6NGY3 159 aa5.69□□□□□ -1.5
UBE2D3-227ENST00000508818 ZNF815PA8K554 130 aa5.69□□□□□ -1.5
UBE2D3-227ENST00000508818 HIST1H2BKO60814 126 aa5.69□□□□□ -1.5
UBE2D3-227ENST00000508818 TIMM17BO60830 172 aa5.69□□□□□ -1.5
UBE2D3-227ENST00000508818 HIST1H2BJP06899 126 aa5.69□□□□□ -1.5
UBE2D3-227ENST00000508818 HIST1H2BOP23527 126 aa5.69□□□□□ -1.5
UBE2D3-227ENST00000508818 HIST1H2BBP33778 126 aa5.69□□□□□ -1.5
UBE2D3-227ENST00000508818 HIST1H2BDP58876 126 aa5.69□□□□□ -1.5
UBE2D3-227ENST00000508818 HIST1H2BCP62807 126 aa5.69□□□□□ -1.5
UBE2D3-227ENST00000508818 HIST2H2BEQ16778 126 aa5.69□□□□□ -1.5
UBE2D3-227ENST00000508818 KRTAP13-3Q3SY46 172 aa5.69□□□□□ -1.5
UBE2D3-227ENST00000508818 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.69□□□□□ -1.5
UBE2D3-227ENST00000508818 SLC25A34Q6PIV7 304 aa5.69□□□□□ -1.5
UBE2D3-227ENST00000508818 HIST1H2BHQ93079 126 aa5.69□□□□□ -1.5
UBE2D3-227ENST00000508818 HIST1H2BNQ99877 126 aa5.69□□□□□ -1.5
UBE2D3-227ENST00000508818 HIST1H2BMQ99879 126 aa5.69□□□□□ -1.5
UBE2D3-227ENST00000508818 LINC01545Q5VT33 79 aa5.68□□□□□ -1.5
UBE2D3-227ENST00000508818 LINC00518Q8N0U6 118 aa5.68□□□□□ -1.5
UBE2D3-227ENST00000508818 ST20-AS1Q8NBB2 130 aa5.68□□□□□ -1.5
UBE2D3-227ENST00000508818 DHRS4-AS1Q9P1J3 65 aa5.68□□□□□ -1.5
UBE2D3-227ENST00000508818 SEC61BP60468 96 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-227ENST00000508818 Q8N377 158 aa5.67□□□□□ -1.5
UBE2D3-227ENST00000508818 SPANXDQ9BXN6 97 aa5.67□□□□□ -1.5
UBE2D3-227ENST00000508818 KRTAP9-3Q9BYQ3 159 aa5.67□□□□□ -1.5
UBE2D3-227ENST00000508818 COX7BP24311 80 aa5.66□□□□□ -1.5
UBE2D3-227ENST00000508818 KRTDAPP60985 99 aa5.66□□□□□ -1.5
UBE2D3-227ENST00000508818 COPS9Q8WXC6 57 aa5.66□□□□□ -1.5
UBE2D3-227ENST00000508818 LITAFQ99732 161 aa5.66□□□□□ -1.5
UBE2D3-227ENST00000508818 LAMTOR3Q9UHA4 124 aa5.66□□□□□ -1.5
UBE2D3-227ENST00000508818 C20orf202A1L168 122 aa5.65□□□□□ -1.5
UBE2D3-227ENST00000508818 TAL2Q16559 108 aa5.65□□□□□ -1.5
UBE2D3-227ENST00000508818 ASB16-AS1Q495Z4 193 aa5.65□□□□□ -1.5
UBE2D3-227ENST00000508818 SCGB1D4Q6XE38 83 aa5.65□□□□□ -1.5
UBE2D3-227ENST00000508818 C3orf79P0CE67 100 aa5.64□□□□□ -1.51
UBE2D3-227ENST00000508818 DEFB105AQ8NG35 78 aa5.64□□□□□ -1.51
UBE2D3-227ENST00000508818 FAT4Q6V0I7 4981 aa5.63□□□□□ -1.51
UBE2D3-227ENST00000508818 SPRR1BP22528 89 aa5.63□□□□□ -1.51
UBE2D3-227ENST00000508818 C6orf99Q4VX62 202 aa5.63□□□□□ -1.51
UBE2D3-227ENST00000508818 HRCT1Q6UXD1 115 aa5.63□□□□□ -1.51
UBE2D3-227ENST00000508818 LIMD2Q9BT23 127 aa5.63□□□□□ -1.51
UBE2D3-227ENST00000508818 TTTY13Q9BZ97 58 aa5.63□□□□□ -1.51
UBE2D3-227ENST00000508818 MUC17Q685J3 4493 aa5.63□□□□□ -1.51
UBE2D3-227ENST00000508818 A6NDN8 102 aa5.62□□□□□ -1.51
UBE2D3-227ENST00000508818 ANKRD39Q53RE8 183 aa5.62□□□□□ -1.51
UBE2D3-227ENST00000508818 IFITM1P13164 125 aa5.61□□□□□ -1.51
UBE2D3-227ENST00000508818 AKR1D1P51857 326 aa5.61□□□□□ -1.51
UBE2D3-227ENST00000508818 LINC01547P58512 204 aaPredicted RBP5.61□□□□□ -1.51
UBE2D3-227ENST00000508818 ELOF1P60002 83 aaKnown RBP5.61□□□□□ -1.51
UBE2D3-227ENST00000508818 TRBV7-6A0A0J9YX20 115 aa5.6□□□□□ -1.51
UBE2D3-227ENST00000508818 TEX49A0A1B0GTD5 131 aa5.6□□□□□ -1.51
UBE2D3-227ENST00000508818 Q1RN00 199 aa5.6□□□□□ -1.51
UBE2D3-227ENST00000508818 COA6Q5JTJ3 125 aaKnown RBP5.6□□□□□ -1.51
UBE2D3-227ENST00000508818 PRO1933Q9H354 126 aa5.6□□□□□ -1.51
UBE2D3-227ENST00000508818 A0A1B0GWB2 263 aa5.59□□□□□ -1.51
UBE2D3-227ENST00000508818 Q6ZVH6 145 aa5.59□□□□□ -1.51
UBE2D3-227ENST00000508818 H7C2G1 150 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms