RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 KRTAP4-7Q9BYR0 210 aa7.37□□□□□ -1.23
HMGCS1-205ENST00000508319 DPM2O94777 84 aa7.36□□□□□ -1.23
HMGCS1-205ENST00000508319 SCGB1D1O95968 90 aa7.36□□□□□ -1.23
HMGCS1-205ENST00000508319 S100A12P80511 92 aa7.36□□□□□ -1.23
HMGCS1-205ENST00000508319 GAGE2AQ6NT46 116 aa7.36□□□□□ -1.23
HMGCS1-205ENST00000508319 Q6ZRX8 168 aa7.36□□□□□ -1.23
HMGCS1-205ENST00000508319 PMCHL2Q9BQD1 86 aa7.36□□□□□ -1.23
HMGCS1-205ENST00000508319 Q9BRP9 147 aa7.36□□□□□ -1.23
HMGCS1-205ENST00000508319 NMUP48645 174 aa7.35□□□□□ -1.23
HMGCS1-205ENST00000508319 KRTAP13-3Q3SY46 172 aa7.35□□□□□ -1.23
HMGCS1-205ENST00000508319 SPANXB1Q9NS25 103 aaPredicted RBP7.35□□□□□ -1.23
HMGCS1-205ENST00000508319 HSPB8Q9UJY1 196 aa7.35□□□□□ -1.23
HMGCS1-205ENST00000508319 SPINK1P00995 79 aa7.34□□□□□ -1.23
HMGCS1-205ENST00000508319 IGKCP01834 107 aa7.34□□□□□ -1.23
HMGCS1-205ENST00000508319 FABP4P15090 132 aa7.34□□□□□ -1.23
HMGCS1-205ENST00000508319 HERVK_113P61574 105 aa7.34□□□□□ -1.23
HMGCS1-205ENST00000508319 MOBPQ13875 183 aa7.34□□□□□ -1.23
HMGCS1-205ENST00000508319 NDUFC2O95298 119 aa7.33□□□□□ -1.24
HMGCS1-205ENST00000508319 IGLV6-57P01721 117 aa7.33□□□□□ -1.24
HMGCS1-205ENST00000508319 LGALS3P17931 250 aaKnown RBP7.33□□□□□ -1.24
HMGCS1-205ENST00000508319 MIEN1Q9BRT3 115 aa7.33□□□□□ -1.24
HMGCS1-205ENST00000508319 IGLV9-49A0A0B4J1Y8 123 aa7.32□□□□□ -1.24
HMGCS1-205ENST00000508319 SOSTDC1Q6X4U4 206 aa7.32□□□□□ -1.24
HMGCS1-205ENST00000508319 RPS29P62273 56 aaKnown RBP7.31□□□□□ -1.24
HMGCS1-205ENST00000508319 TRAV23DV6A0A075B6W5 121 aa7.3□□□□□ -1.24
HMGCS1-205ENST00000508319 A0A0J9YXY3 114 aa7.3□□□□□ -1.24
HMGCS1-205ENST00000508319 COLCA2A8K830 154 aa7.3□□□□□ -1.24
HMGCS1-205ENST00000508319 S100A7L2Q5SY68 101 aa7.3□□□□□ -1.24
HMGCS1-205ENST00000508319 ADAMTSL4-AS1Q5T5F5 129 aa7.3□□□□□ -1.24
HMGCS1-205ENST00000508319 LCE1DQ5T752 114 aa7.3□□□□□ -1.24
HMGCS1-205ENST00000508319 Q8N377 158 aa7.3□□□□□ -1.24
HMGCS1-205ENST00000508319 E9PLD3 99 aa7.29□□□□□ -1.24
HMGCS1-205ENST00000508319 NPC2P61916 151 aa7.29□□□□□ -1.24
HMGCS1-205ENST00000508319 ASB16-AS1Q495Z4 193 aa7.29□□□□□ -1.24
HMGCS1-205ENST00000508319 SSBP3-AS1Q7Z2R9 100 aa7.29□□□□□ -1.24
HMGCS1-205ENST00000508319 ZNF73O43830 326 aaPredicted RBP7.28□□□□□ -1.24
HMGCS1-205ENST00000508319 JOSD1Q15040 202 aaPredicted RBP7.27□□□□□ -1.25
HMGCS1-205ENST00000508319 SLC7A5P1Q8MH63 180 aa7.27□□□□□ -1.25
HMGCS1-205ENST00000508319 LITAFQ99732 161 aa7.26□□□□□ -1.25
HMGCS1-205ENST00000508319 SLC25A20O43772 301 aa7.25□□□□□ -1.25
HMGCS1-205ENST00000508319 C9orf153Q5TBE3 101 aa7.25□□□□□ -1.25
HMGCS1-205ENST00000508319 ST20-AS1Q8NBB2 130 aa7.25□□□□□ -1.25
HMGCS1-205ENST00000508319 KRTAP4-1Q9BYQ7 146 aa7.25□□□□□ -1.25
HMGCS1-205ENST00000508319 SYS1-DBNDD2H3BUS1 97 aa7.24□□□□□ -1.25
HMGCS1-205ENST00000508319 SPANXCQ9NY87 97 aa7.24□□□□□ -1.25
HMGCS1-205ENST00000508319 HIST1H2BKO60814 126 aa7.23□□□□□ -1.25
HMGCS1-205ENST00000508319 HIST1H2BJP06899 126 aa7.23□□□□□ -1.25
HMGCS1-205ENST00000508319 HIST1H2BOP23527 126 aa7.23□□□□□ -1.25
HMGCS1-205ENST00000508319 HIST1H2BBP33778 126 aa7.23□□□□□ -1.25
HMGCS1-205ENST00000508319 HIST1H2BDP58876 126 aa7.23□□□□□ -1.25
HMGCS1-205ENST00000508319 HIST1H2BCP62807 126 aa7.23□□□□□ -1.25
HMGCS1-205ENST00000508319 HIST2H2BEQ16778 126 aa7.23□□□□□ -1.25
HMGCS1-205ENST00000508319 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.23□□□□□ -1.25
HMGCS1-205ENST00000508319 LINC00308Q8TCZ7 52 aa7.23□□□□□ -1.25
HMGCS1-205ENST00000508319 HIST1H2BHQ93079 126 aa7.23□□□□□ -1.25
HMGCS1-205ENST00000508319 HIST1H2BNQ99877 126 aa7.23□□□□□ -1.25
HMGCS1-205ENST00000508319 HIST1H2BMQ99879 126 aa7.23□□□□□ -1.25
HMGCS1-205ENST00000508319 C5orf52A6NGY3 159 aa7.22□□□□□ -1.25
HMGCS1-205ENST00000508319 LINC01545Q5VT33 79 aa7.22□□□□□ -1.25
HMGCS1-205ENST00000508319 TIMM17BO60830 172 aa7.21□□□□□ -1.26
HMGCS1-205ENST00000508319 SEC61BP60468 96 aaKnown RBP7.21□□□□□ -1.26
HMGCS1-205ENST00000508319 CBY1Q9Y3M2 126 aa7.21□□□□□ -1.26
HMGCS1-205ENST00000508319 SPRR1BP22528 89 aa7.2□□□□□ -1.26
HMGCS1-205ENST00000508319 TTTY13Q9BZ97 58 aa7.2□□□□□ -1.26
HMGCS1-205ENST00000508319 ZNF815PA8K554 130 aa7.19□□□□□ -1.26
HMGCS1-205ENST00000508319 HINT1P49773 126 aaPredicted RBP7.19□□□□□ -1.26
HMGCS1-205ENST00000508319 PET117Q6UWS5 81 aa7.19□□□□□ -1.26
HMGCS1-205ENST00000508319 OR13C6PQ8NH95 151 aa7.19□□□□□ -1.26
HMGCS1-205ENST00000508319 SPANXDQ9BXN6 97 aa7.19□□□□□ -1.26
HMGCS1-205ENST00000508319 DHRS4-AS1Q9P1J3 65 aa7.18□□□□□ -1.26
HMGCS1-205ENST00000508319 ELOF1P60002 83 aaKnown RBP7.17□□□□□ -1.26
HMGCS1-205ENST00000508319 C3orf79P0CE67 100 aa7.16□□□□□ -1.26
HMGCS1-205ENST00000508319 C6orf99Q4VX62 202 aa7.15□□□□□ -1.26
HMGCS1-205ENST00000508319 SLC25A34Q6PIV7 304 aa7.15□□□□□ -1.26
HMGCS1-205ENST00000508319 COX7BP24311 80 aa7.14□□□□□ -1.27
HMGCS1-205ENST00000508319 LINC01547P58512 204 aaPredicted RBP7.14□□□□□ -1.27
HMGCS1-205ENST00000508319 HRCT1Q6UXD1 115 aa7.14□□□□□ -1.27
HMGCS1-205ENST00000508319 LIMD2Q9BT23 127 aa7.14□□□□□ -1.27
HMGCS1-205ENST00000508319 KRTAP4-9Q9BYQ8 210 aa7.14□□□□□ -1.27
HMGCS1-205ENST00000508319 LINC00518Q8N0U6 118 aa7.13□□□□□ -1.27
HMGCS1-205ENST00000508319 LAMTOR3Q9UHA4 124 aa7.13□□□□□ -1.27
HMGCS1-205ENST00000508319 COA6Q5JTJ3 125 aaKnown RBP7.12□□□□□ -1.27
HMGCS1-205ENST00000508319 KRTDAPP60985 99 aa7.11□□□□□ -1.27
HMGCS1-205ENST00000508319 Q1RN00 199 aa7.11□□□□□ -1.27
HMGCS1-205ENST00000508319 TRBV7-6A0A0J9YX20 115 aa7.1□□□□□ -1.27
HMGCS1-205ENST00000508319 SCGB1D4Q6XE38 83 aa7.1□□□□□ -1.27
HMGCS1-205ENST00000508319 TEX49A0A1B0GTD5 131 aa7.09□□□□□ -1.27
HMGCS1-205ENST00000508319 CD164Q04900 197 aa7.09□□□□□ -1.27
HMGCS1-205ENST00000508319 SMIM29Q86T20 159 aa7.09□□□□□ -1.27
HMGCS1-205ENST00000508319 DEFB105AQ8NG35 78 aa7.09□□□□□ -1.27
HMGCS1-205ENST00000508319 A0A1B0GWB2 263 aa7.08□□□□□ -1.28
HMGCS1-205ENST00000508319 C9orf92A6NGG3 77 aa7.08□□□□□ -1.28
HMGCS1-205ENST00000508319 TAL2Q16559 108 aa7.08□□□□□ -1.28
HMGCS1-205ENST00000508319 KRTAP19-2Q3LHN2 52 aa7.08□□□□□ -1.28
HMGCS1-205ENST00000508319 IGLV5-48A0A075B6I7 105 aa7.07□□□□□ -1.28
HMGCS1-205ENST00000508319 IFITM1P13164 125 aa7.07□□□□□ -1.28
HMGCS1-205ENST00000508319 ATOH7Q8N100 152 aa7.07□□□□□ -1.28
HMGCS1-205ENST00000508319 COPS9Q8WXC6 57 aa7.07□□□□□ -1.28
HMGCS1-205ENST00000508319 KRTAP4-2Q9BYR5 136 aa7.07□□□□□ -1.28
HMGCS1-205ENST00000508319 PRO1933Q9H354 126 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms